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The map label for this gene is 38234036

Identifier: 38234036

GI number: 38234036

Start: 1473435

End: 1474274

Strand: Reverse

Name: 38234036

Synonym: DIP1455

Alternate gene names: NA

Gene position: 1474274-1473435 (Counterclockwise)

Preceding gene: 38234037

Following gene: 38234032

Centisome position: 59.24

GC content: 49.52

Gene sequence:

>840_bases
ATGGCGAATCCATTTTCTAAAGCATGGAAATACCTCATGGCTTTGTTTGATTCGAAAATTGAAGAGAACGCTGATCCAAA
GGTACAGATTCAACAGGCTATCGAAGACGCCCAGAGGCAACATCAAGAGTTGTCTCAGCAAGCTGCAGCTGTGATCGGTA
ACCAGCGTCAGTTGGAGATGCAGCTCAACCGTCGTCTCGCGGAAATTGAAAAACTCCAAGGAAATACCCGTCAGGCAATC
CAGTTGGCTGACAAAGCTCGTGCAGAGGGAAACATTCAGAAGGCAACTGAGTATGAAAATGCTGCAGAAGCGTTTGCGGC
TCAGCTCGTTACTGCTGAACAAGGCGTAGAAGATACCAAACAGCTTCATGATCAAGCGCTCCAGCAGGCTGACGCAGCGA
AAAAGGCTGTAGAGCGTAATGCTATGGTTTTGCAGCAAAAGGTGGCCGAGCGTACTAAACTTCTGAGCCAGCTCGAGCAG
GCAAAGATGCAGGAAAAGGTTGCGGAGTCTATTCAGTCTATGAATTCGATTTCCAACCGTGACACCCCTAATCTTGATCA
GGTTCGTGAGAAGATCGAACGTCGATACGCAAATGCTTTGGGCACTGCTGAACTAGCTCAAAACTCTGTTCAGGGACGAA
TGGCAGAAGTGGAACAAGCGGGAATTCAACTCGCGGGTCATTCTCGCCTAGAACAAATTCGTGCTGAGATGTCTGGTGGT
CAACTAGGTGCCGGGAATTCCGCCACGCAACAGTCGATTGAATCTGCACAACAGGCTACGCCAAGTGCTGCTGATGATGC
GGTAGCGCGGAAAATGCGTGAGCTTCGCGGAGAAGCTTAG

Upstream 100 bases:

>100_bases
TGCGTGGTTTTCACAAGATTTATAAAAAGTTTCATCACTAATTGATGTGCTGCAGTCTTCAATATGTGCAGCGAATACAT
AATGAAAGGGCGATACGTCG

Downstream 100 bases:

>100_bases
AACTTTATAGATAGATAGTGCGGATCCACACTCTTGTGGATCCGCACTATCTTTTTTAGTCCCCAGCTCCGCGTGCCATT
AGAGCATCCGCAATCGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MANPFSKAWKYLMALFDSKIEENADPKVQIQQAIEDAQRQHQELSQQAAAVIGNQRQLEMQLNRRLAEIEKLQGNTRQAI
QLADKARAEGNIQKATEYENAAEAFAAQLVTAEQGVEDTKQLHDQALQQADAAKKAVERNAMVLQQKVAERTKLLSQLEQ
AKMQEKVAESIQSMNSISNRDTPNLDQVREKIERRYANALGTAELAQNSVQGRMAEVEQAGIQLAGHSRLEQIRAEMSGG
QLGAGNSATQQSIESAQQATPSAADDAVARKMRELRGEA

Sequences:

>Translated_279_residues
MANPFSKAWKYLMALFDSKIEENADPKVQIQQAIEDAQRQHQELSQQAAAVIGNQRQLEMQLNRRLAEIEKLQGNTRQAI
QLADKARAEGNIQKATEYENAAEAFAAQLVTAEQGVEDTKQLHDQALQQADAAKKAVERNAMVLQQKVAERTKLLSQLEQ
AKMQEKVAESIQSMNSISNRDTPNLDQVREKIERRYANALGTAELAQNSVQGRMAEVEQAGIQLAGHSRLEQIRAEMSGG
QLGAGNSATQQSIESAQQATPSAADDAVARKMRELRGEA
>Mature_278_residues
ANPFSKAWKYLMALFDSKIEENADPKVQIQQAIEDAQRQHQELSQQAAAVIGNQRQLEMQLNRRLAEIEKLQGNTRQAIQ
LADKARAEGNIQKATEYENAAEAFAAQLVTAEQGVEDTKQLHDQALQQADAAKKAVERNAMVLQQKVAERTKLLSQLEQA
KMQEKVAESIQSMNSISNRDTPNLDQVREKIERRYANALGTAELAQNSVQGRMAEVEQAGIQLAGHSRLEQIRAEMSGGQ
LGAGNSATQQSIESAQQATPSAADDAVARKMRELRGEA

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 30775; Mature: 30644

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ANPFSKAWKYLMALFDSKIEENADPKVQIQQAIEDAQRQHQELSQQAAAVIGNQRQLEM
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
QLNRRLAEIEKLQGNTRQAIQLADKARAEGNIQKATEYENAAEAFAAQLVTAEQGVEDTK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
QLHDQALQQADAAKKAVERNAMVLQQKVAERTKLLSQLEQAKMQEKVAESIQSMNSISNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DTPNLDQVREKIERRYANALGTAELAQNSVQGRMAEVEQAGIQLAGHSRLEQIRAEMSGG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QLGAGNSATQQSIESAQQATPSAADDAVARKMRELRGEA
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2119046 [H]