| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
Click here to switch to the map view.
The map label for this gene is 38234007
Identifier: 38234007
GI number: 38234007
Start: 1440295
End: 1441260
Strand: Reverse
Name: 38234007
Synonym: DIP1422
Alternate gene names: NA
Gene position: 1441260-1440295 (Counterclockwise)
Preceding gene: 38234009
Following gene: 38234005
Centisome position: 57.91
GC content: 46.48
Gene sequence:
>966_bases ATGACCACCCCTCGGAATCCTTTTGACCCTCAAGATAATGAGTACGAACCTTACCCTTCTACTTCCCATCCAGAAGATCG TGGTTTTAACGTCCCAGCTGATGGATACCCCACCAGTTCGCCGCTAGGTAGTTATTCCGGTTCCTATGCAGGTTATGGCA GCGGTGCAAGTTCTGCTGGGGAGCAGAAGTTCCATAAAGATCTTAAAGATCCGTTTGTGGAGCACGCCGGTAAGGCAGAC ATCTTCGCAGCGATAGAATACGGATTCCGAATTGTCTTCAAGAAGCCGCTATGGATACTAGGTGCTTTCCTGATACTTGC GGTTGTTGGAGTTGGGACAGCAACAGCAACGTATCTGTCTTTCGGGGCGAGTGGGGGATTTGAGGATCCCAGCGCAGTAC CTGACCCCTCCATAAGAGGTACAGATTTTTTGGTTAATTTTGGATCCATATTGATCGCAGCTTTTGGTATTCGCCTTGTG CTATTGCAGCTTGATGGTCTTCCTATCACCCTTGGTGAAGTCTTCACCAAAGCTCGTTGGCTTAAGACAACAGCGACGGA ATTTTTAATATTCATATTGCTACTTATTCCAATGGGAATTAGCATCGCGGTCCTTTTTGTCACTGCTTTCAATCTGCAAA CAGGGGGCAGTTGGGTGCCATTTGTATTGGTACTCGTATTGATTCTTGTCGTTGCCACATTCATTTCACCATTTTTTACC TATGCTCCGTATTTCGTATGCGATGGGCGCGCCTCGGTGATAGAAGGAATACGTCTTGGTTTTGTACAGGTTTCTAAAAA CTATTGGCAAGCAGTGGGCTTTAGCGTGTTCAACTTCTTGATTTCTACATTCGGGTTGCTCATCACTCTTGGACTAGGCG CGATTATTATCGTTCCCGCCATGATGAATGCTCAGGCTCATATGTATCGGCAAATTGCTCAAGGAACGGTTCCGTTGAAA GCATAG
Upstream 100 bases:
>100_bases AGTAATGCAACAATTGGGGCTAGTTACTGGAGTACGAAAAACTGTTCCAGTAAGGTCGGGCCTGTATTGAATAATTTCAG AGCCTCACGCTAGGAGTGAC
Downstream 100 bases:
>100_bases GAAATAAGAGAATGGTGGTGAGGATCGTGAAATCCTCTCCACCATTTTTATTATGCTAATTCTGCGCGATAACGTCTTGA AACGCTTGGCCAACTATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MTTPRNPFDPQDNEYEPYPSTSHPEDRGFNVPADGYPTSSPLGSYSGSYAGYGSGASSAGEQKFHKDLKDPFVEHAGKAD IFAAIEYGFRIVFKKPLWILGAFLILAVVGVGTATATYLSFGASGGFEDPSAVPDPSIRGTDFLVNFGSILIAAFGIRLV LLQLDGLPITLGEVFTKARWLKTTATEFLIFILLLIPMGISIAVLFVTAFNLQTGGSWVPFVLVLVLILVVATFISPFFT YAPYFVCDGRASVIEGIRLGFVQVSKNYWQAVGFSVFNFLISTFGLLITLGLGAIIIVPAMMNAQAHMYRQIAQGTVPLK A
Sequences:
>Translated_321_residues MTTPRNPFDPQDNEYEPYPSTSHPEDRGFNVPADGYPTSSPLGSYSGSYAGYGSGASSAGEQKFHKDLKDPFVEHAGKAD IFAAIEYGFRIVFKKPLWILGAFLILAVVGVGTATATYLSFGASGGFEDPSAVPDPSIRGTDFLVNFGSILIAAFGIRLV LLQLDGLPITLGEVFTKARWLKTTATEFLIFILLLIPMGISIAVLFVTAFNLQTGGSWVPFVLVLVLILVVATFISPFFT YAPYFVCDGRASVIEGIRLGFVQVSKNYWQAVGFSVFNFLISTFGLLITLGLGAIIIVPAMMNAQAHMYRQIAQGTVPLK A >Mature_320_residues TTPRNPFDPQDNEYEPYPSTSHPEDRGFNVPADGYPTSSPLGSYSGSYAGYGSGASSAGEQKFHKDLKDPFVEHAGKADI FAAIEYGFRIVFKKPLWILGAFLILAVVGVGTATATYLSFGASGGFEDPSAVPDPSIRGTDFLVNFGSILIAAFGIRLVL LQLDGLPITLGEVFTKARWLKTTATEFLIFILLLIPMGISIAVLFVTAFNLQTGGSWVPFVLVLVLILVVATFISPFFTY APYFVCDGRASVIEGIRLGFVQVSKNYWQAVGFSVFNFLISTFGLLITLGLGAIIIVPAMMNAQAHMYRQIAQGTVPLKA
Specific function: Unknown
COG id: COG5473
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34652; Mature: 34520
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPRNPFDPQDNEYEPYPSTSHPEDRGFNVPADGYPTSSPLGSYSGSYAGYGSGASSAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH EQKFHKDLKDPFVEHAGKADIFAAIEYGFRIVFKKPLWILGAFLILAVVGVGTATATYLS HHHHHHHHHHHHHHHCCCHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHH FGASGGFEDPSAVPDPSIRGTDFLVNFGSILIAAFGIRLVLLQLDGLPITLGEVFTKARW HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH LKTTATEFLIFILLLIPMGISIAVLFVTAFNLQTGGSWVPFVLVLVLILVVATFISPFFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YAPYFVCDGRASVIEGIRLGFVQVSKNYWQAVGFSVFNFLISTFGLLITLGLGAIIIVPA HCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMNAQAHMYRQIAQGTVPLKA HHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTPRNPFDPQDNEYEPYPSTSHPEDRGFNVPADGYPTSSPLGSYSGSYAGYGSGASSAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH EQKFHKDLKDPFVEHAGKADIFAAIEYGFRIVFKKPLWILGAFLILAVVGVGTATATYLS HHHHHHHHHHHHHHHCCCHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHH FGASGGFEDPSAVPDPSIRGTDFLVNFGSILIAAFGIRLVLLQLDGLPITLGEVFTKARW HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH LKTTATEFLIFILLLIPMGISIAVLFVTAFNLQTGGSWVPFVLVLVLILVVATFISPFFT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YAPYFVCDGRASVIEGIRLGFVQVSKNYWQAVGFSVFNFLISTFGLLITLGLGAIIIVPA HCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MMNAQAHMYRQIAQGTVPLKA HHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA