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The map label for this gene is 38233944

Identifier: 38233944

GI number: 38233944

Start: 1376471

End: 1377061

Strand: Direct

Name: 38233944

Synonym: DIP1358

Alternate gene names: NA

Gene position: 1376471-1377061 (Clockwise)

Preceding gene: 38233940

Following gene: 38233945

Centisome position: 55.31

GC content: 48.73

Gene sequence:

>591_bases
ATGCGAACGGACGCGTTGCGAAGGCGAAACAGCATTATCTCAGCCGGAAGCGCTCTTCTTATCCAAGCCGGTACTCACAT
GACGGTCGAGTCAGTCGCAGAACGCGCCAAAGTCGGAATCGCAACGTTGTACCGAAACTTCCCAACGCGTGAACACCTCC
TTCAAGCCTGCATTGGCAATATCGCTGACAATGGCATCGAACAACTCAATTCCATAGCCAATTGCCCTCCCCGATCATCG
ACCGAAGCCAAACAACAACTCATCACTCTCATATCTCTCATTTCTACGATCGGGCTTAATATCGTCATTCCAGCCATCAT
CCAGCCTCCCGAATCAAGTTTGGCTCCAGAATTTATAGACGCTCGACGTACACTCATGAAGTTGATGCGAACTATCGATT
CCAATCTTCGGGCCACAGGACTAATTCATCCTTCCATCTCAATCCTGGACTTCTACACCGGCATTATTGCTCTATGTGCA
CCCCCTCATTTCAGTGCGACAGATACACCGACTCCCACAACTGAGCACCTCATCGATATTTTCATTGCAGGTTGCAAAAC
TGGAGTAGCTAAAGCCACTAAAAATAGCTAG

Upstream 100 bases:

>100_bases
TTGCGCCCACAATAAGTGAGAAGGTACCCTCCACTAAAGCGGATCATCAACATATTTCTCTCACAAGACACCATTGTCAA
ACCCTCGAGGACTCTAAACT

Downstream 100 bases:

>100_bases
GTTGGTAACTTCACCCATCTTCCCCACCCCGCTCAAGGAGCAGTATGTCAATCAGTGTCACTGATTTGTTTAGTATCGGA
ATTGGCCCTTCTTCTTCCCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MRTDALRRRNSIISAGSALLIQAGTHMTVESVAERAKVGIATLYRNFPTREHLLQACIGNIADNGIEQLNSIANCPPRSS
TEAKQQLITLISLISTIGLNIVIPAIIQPPESSLAPEFIDARRTLMKLMRTIDSNLRATGLIHPSISILDFYTGIIALCA
PPHFSATDTPTPTTEHLIDIFIAGCKTGVAKATKNS

Sequences:

>Translated_196_residues
MRTDALRRRNSIISAGSALLIQAGTHMTVESVAERAKVGIATLYRNFPTREHLLQACIGNIADNGIEQLNSIANCPPRSS
TEAKQQLITLISLISTIGLNIVIPAIIQPPESSLAPEFIDARRTLMKLMRTIDSNLRATGLIHPSISILDFYTGIIALCA
PPHFSATDTPTPTTEHLIDIFIAGCKTGVAKATKNS
>Mature_196_residues
MRTDALRRRNSIISAGSALLIQAGTHMTVESVAERAKVGIATLYRNFPTREHLLQACIGNIADNGIEQLNSIANCPPRSS
TEAKQQLITLISLISTIGLNIVIPAIIQPPESSLAPEFIDARRTLMKLMRTIDSNLRATGLIHPSISILDFYTGIIALCA
PPHFSATDTPTPTTEHLIDIFIAGCKTGVAKATKNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21112; Mature: 21112

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTDALRRRNSIISAGSALLIQAGTHMTVESVAERAKVGIATLYRNFPTREHLLQACIGN
CCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IADNGIEQLNSIANCPPRSSTEAKQQLITLISLISTIGLNIVIPAIIQPPESSLAPEFID
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
ARRTLMKLMRTIDSNLRATGLIHPSISILDFYTGIIALCAPPHFSATDTPTPTTEHLIDI
HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
FIAGCKTGVAKATKNS
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRTDALRRRNSIISAGSALLIQAGTHMTVESVAERAKVGIATLYRNFPTREHLLQACIGN
CCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IADNGIEQLNSIANCPPRSSTEAKQQLITLISLISTIGLNIVIPAIIQPPESSLAPEFID
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
ARRTLMKLMRTIDSNLRATGLIHPSISILDFYTGIIALCAPPHFSATDTPTPTTEHLIDI
HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
FIAGCKTGVAKATKNS
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA