| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is gmk
Identifier: 38233914
GI number: 38233914
Start: 1340681
End: 1341256
Strand: Reverse
Name: gmk
Synonym: DIP1328
Alternate gene names: 38233914
Gene position: 1341256-1340681 (Counterclockwise)
Preceding gene: 38233915
Following gene: 38233913
Centisome position: 53.9
GC content: 51.91
Gene sequence:
>576_bases ATGAGTGGCGATAACCCAGTAGGCCGTCTGGTGGTACTCGCAGGGCCTTCTGCCGTGGGTAAATCCACGGTGGTTCATCG CCTCCGCGAAGAAATTGAAGACCTCTACTTCAGCGTATCTATGACCACGCGTGCTCCTCGACCAGGAGAGCGCGATGGCG TGGACTATTTTTTTGTGTCACCTGAAGAGTTTCAATCCAAGATTGATGCGGGGGAGATGCTGGAATGGGCTGATATTCAC GGTGGTCTTCAACGTTCGGGAACTCCTGCGGGACCTGTTGAAGCTGCACTTCTGGCCGGTCGACCTGTTCTCGTTGAGGT GGATTTGGTCGGTGCGCGAAACGTGGCATCGCTAAAACCTGAATCTGAGACTGTATTTTTAGCCCCGCCATCGTGGGAAG TTTTAGTGGAACGTCTGACAGGACGTGGTACTGAACCCGAAGACGTAATTACTCGTCGACTGGAAACAGCGAAGAATGAA CTTACTGCTCAGCATGAGTTCAAACACGTTGTTGTCAATGAGGACGTGGAAAAAGCTGTGTCGGACATCAAGGAAATCCT TGTCGGCCGTCGTTAA
Upstream 100 bases:
>100_bases GGAGGAACTTGAAATTGCTCAGACCCGTCGTCTGCGCGGTTTGGGTGATCGTCAGCGTCGTGCTCTGCTCGAGCGTTTCG GATACTCGGAGGACTAATTC
Downstream 100 bases:
>100_bases AGCTAGCGCCTGCTACATTTTTGTGTAGCTGTTGAATCCGAGAACTATCAAGCTGTGAAGAAGAGGTGCCTCCGTGAGCA ACGTGGCAGAGAACAATGAC
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MSGDNPVGRLVVLAGPSAVGKSTVVHRLREEIEDLYFSVSMTTRAPRPGERDGVDYFFVSPEEFQSKIDAGEMLEWADIH GGLQRSGTPAGPVEAALLAGRPVLVEVDLVGARNVASLKPESETVFLAPPSWEVLVERLTGRGTEPEDVITRRLETAKNE LTAQHEFKHVVVNEDVEKAVSDIKEILVGRR
Sequences:
>Translated_191_residues MSGDNPVGRLVVLAGPSAVGKSTVVHRLREEIEDLYFSVSMTTRAPRPGERDGVDYFFVSPEEFQSKIDAGEMLEWADIH GGLQRSGTPAGPVEAALLAGRPVLVEVDLVGARNVASLKPESETVFLAPPSWEVLVERLTGRGTEPEDVITRRLETAKNE LTAQHEFKHVVVNEDVEKAVSDIKEILVGRR >Mature_190_residues SGDNPVGRLVVLAGPSAVGKSTVVHRLREEIEDLYFSVSMTTRAPRPGERDGVDYFFVSPEEFQSKIDAGEMLEWADIHG GLQRSGTPAGPVEAALLAGRPVLVEVDLVGARNVASLKPESETVFLAPPSWEVLVERLTGRGTEPEDVITRRLETAKNEL TAQHEFKHVVVNEDVEKAVSDIKEILVGRR
Specific function: Essential for recycling GMP and indirectly, cGMP
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain
Homologues:
Organism=Homo sapiens, GI226874831, Length=191, Percent_Identity=39.7905759162304, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI226874833, Length=191, Percent_Identity=39.7905759162304, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI4504221, Length=191, Percent_Identity=39.7905759162304, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI38570142, Length=184, Percent_Identity=28.804347826087, Blast_Score=71, Evalue=7e-13, Organism=Escherichia coli, GI1790080, Length=186, Percent_Identity=36.0215053763441, Blast_Score=125, Evalue=2e-30, Organism=Caenorhabditis elegans, GI193203132, Length=184, Percent_Identity=35.3260869565217, Blast_Score=112, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17508835, Length=184, Percent_Identity=35.3260869565217, Blast_Score=112, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6320662, Length=190, Percent_Identity=39.4736842105263, Blast_Score=135, Evalue=4e-33, Organism=Drosophila melanogaster, GI21356141, Length=187, Percent_Identity=33.6898395721925, Blast_Score=99, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KGUA_CORDI (P60550)
Other databases:
- EMBL: BX248357 - RefSeq: NP_939681.1 - ProteinModelPortal: P60550 - SMR: P60550 - GeneID: 2649882 - GenomeReviews: BX248353_GR - KEGG: cdi:DIP1328 - NMPDR: fig|257309.1.peg.1272 - HOGENOM: HBG671982 - OMA: EWAEFAG - ProtClustDB: PRK00300 - BioCyc: CDIP257309:DIP1328-MONOMER - BRENDA: 2.7.4.8 - GO: GO:0005737 - HAMAP: MF_00328 - InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 - SMART: SM00072 - TIGRFAMs: TIGR03263
Pfam domain/function: PF00625 Guanylate_kin
EC number: =2.7.4.8
Molecular weight: Translated: 20896; Mature: 20765
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00856 GUANYLATE_KINASE_1; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDNPVGRLVVLAGPSAVGKSTVVHRLREEIEDLYFSVSMTTRAPRPGERDGVDYFFVS CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEC PEEFQSKIDAGEMLEWADIHGGLQRSGTPAGPVEAALLAGRPVLVEVDLVGARNVASLKP HHHHHHHCCHHHHHHHHHHCCCHHCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCC ESETVFLAPPSWEVLVERLTGRGTEPEDVITRRLETAKNELTAQHEFKHVVVNEDVEKAV CCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHH SDIKEILVGRR HHHHHHHCCCC >Mature Secondary Structure SGDNPVGRLVVLAGPSAVGKSTVVHRLREEIEDLYFSVSMTTRAPRPGERDGVDYFFVS CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCEEEEC PEEFQSKIDAGEMLEWADIHGGLQRSGTPAGPVEAALLAGRPVLVEVDLVGARNVASLKP HHHHHHHCCHHHHHHHHHHCCCHHCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCC ESETVFLAPPSWEVLVERLTGRGTEPEDVITRRLETAKNELTAQHEFKHVVVNEDVEKAV CCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHHHHH SDIKEILVGRR HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14602910