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The map label for this gene is ybhK [C]

Identifier: 38233898

GI number: 38233898

Start: 1323568

End: 1324539

Strand: Reverse

Name: ybhK [C]

Synonym: DIP1312

Alternate gene names: 38233898

Gene position: 1324539-1323568 (Counterclockwise)

Preceding gene: 38233899

Following gene: 38233897

Centisome position: 53.22

GC content: 50.93

Gene sequence:

>972_bases
GTGAATAAACTAGACACCTCGCAACTTAAAATCGCGAGTATGGGGGGAGGGCACGGCCTATTTCAAACCCTCCGTGCCGT
TCGGCAGCTTAATCCTGCAAGTATCGACGCAATCGTAACTGTGGCCGATGACGGTGGTTCATCAGGGCGAATCCGTCGTG
AGTTAGGACAGATTCCTCCTGGCGATCTACGGATGGCCCTTGCAGCACTCGCTCCTTTTGATGATGAAGGTTTGCAATGG
GAAACGCTCCTCCAGCATCGCTTTGGTGGGCATGGGGCACTAGCTGGGCACGCAGTAGGCAACCTTATAATTGCTGGTCT
GTGCGATACCTTAGGAAGCGAAATTGCCGCTCTAGATGCAGTAGCAAAAGTCATCAAAGCTGAAGGTCGCGTATTGCCAG
CATGCGCTGAGCCATTAGAAATTGCGGCAGAGGTATCAGGCTTAGATGATGATCCACGGATTATGCGAGAAGTCATTGGG
CAAGTTGCAGTCGCATCAACGCCAGGTACTGTACGGCGTGTCCGTCTTATTCCAGAAAGGCCAGAGGCAACTGAGGAATC
GGTTGAAGCTATTGAAAACGCGGATTTGGTGACGTTAGGACCTGGTTCATGGTTCTCAAGCGTTATCCCGCATGTTTTGG
TTCCAGGAATTCCTACGGCATTGGCCACCACTAAAGCTTTGCGGGTAGTAGTGCTTAATTTAAGTCCAGAGCCGGGAGAG
ACAGCAGGATTTACCGCTGAACGGCATATCCATATCCTGTCTCAACATGCCCAGACGTTGAGAGCAGATGTGATTTTAGT
GGACGAGGGACTAATCCCGCACAAAGGCGAAAGAGTCCATCTGGAACGAGCTGCAGCGGTGCTTGGAGCACAGATTTCGT
ATCATGATTTAAGTGAAACCGATCCCAGCGGCCGACGAATTCATCGCCATGATCCCGCAAAATTAGCTGAAGCGTTACGT
TTACAGCTTTAG

Upstream 100 bases:

>100_bases
AGCTGAAGAATTAGCGCGTCGTTTGAGAGAGGTTCCGGACCTTGATGTCAGCGTTAATCACCGAGATATCGCCAGAAATT
AGTGAGGATTGAGTCTCACA

Downstream 100 bases:

>100_bases
GACGCATACGTGGGCGCGTTAATATAGAGTTTTCGCCCTTGACTTTGCCGCATTGCGCACCAAACATTAACTAAAACGTG
AAGGAACGGATACGTGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MNKLDTSQLKIASMGGGHGLFQTLRAVRQLNPASIDAIVTVADDGGSSGRIRRELGQIPPGDLRMALAALAPFDDEGLQW
ETLLQHRFGGHGALAGHAVGNLIIAGLCDTLGSEIAALDAVAKVIKAEGRVLPACAEPLEIAAEVSGLDDDPRIMREVIG
QVAVASTPGTVRRVRLIPERPEATEESVEAIENADLVTLGPGSWFSSVIPHVLVPGIPTALATTKALRVVVLNLSPEPGE
TAGFTAERHIHILSQHAQTLRADVILVDEGLIPHKGERVHLERAAAVLGAQISYHDLSETDPSGRRIHRHDPAKLAEALR
LQL

Sequences:

>Translated_323_residues
MNKLDTSQLKIASMGGGHGLFQTLRAVRQLNPASIDAIVTVADDGGSSGRIRRELGQIPPGDLRMALAALAPFDDEGLQW
ETLLQHRFGGHGALAGHAVGNLIIAGLCDTLGSEIAALDAVAKVIKAEGRVLPACAEPLEIAAEVSGLDDDPRIMREVIG
QVAVASTPGTVRRVRLIPERPEATEESVEAIENADLVTLGPGSWFSSVIPHVLVPGIPTALATTKALRVVVLNLSPEPGE
TAGFTAERHIHILSQHAQTLRADVILVDEGLIPHKGERVHLERAAAVLGAQISYHDLSETDPSGRRIHRHDPAKLAEALR
LQL
>Mature_323_residues
MNKLDTSQLKIASMGGGHGLFQTLRAVRQLNPASIDAIVTVADDGGSSGRIRRELGQIPPGDLRMALAALAPFDDEGLQW
ETLLQHRFGGHGALAGHAVGNLIIAGLCDTLGSEIAALDAVAKVIKAEGRVLPACAEPLEIAAEVSGLDDDPRIMREVIG
QVAVASTPGTVRRVRLIPERPEATEESVEAIENADLVTLGPGSWFSSVIPHVLVPGIPTALATTKALRVVVLNLSPEPGE
TAGFTAERHIHILSQHAQTLRADVILVDEGLIPHKGERVHLERAAAVLGAQISYHDLSETDPSGRRIHRHDPAKLAEALR
LQL

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=259, Percent_Identity=32.8185328185328, Blast_Score=117, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 34265; Mature: 34265

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKLDTSQLKIASMGGGHGLFQTLRAVRQLNPASIDAIVTVADDGGSSGRIRRELGQIPP
CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHCCCCC
GDLRMALAALAPFDDEGLQWETLLQHRFGGHGALAGHAVGNLIIAGLCDTLGSEIAALDA
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAKVIKAEGRVLPACAEPLEIAAEVSGLDDDPRIMREVIGQVAVASTPGTVRRVRLIPER
HHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCCEEEEEECCCC
PEATEESVEAIENADLVTLGPGSWFSSVIPHVLVPGIPTALATTKALRVVVLNLSPEPGE
CCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHEEEEEEEECCCCCCC
TAGFTAERHIHILSQHAQTLRADVILVDEGLIPHKGERVHLERAAAVLGAQISYHDLSET
CCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEHHHHHHHHHHCCCEECCCCCC
DPSGRRIHRHDPAKLAEALRLQL
CCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MNKLDTSQLKIASMGGGHGLFQTLRAVRQLNPASIDAIVTVADDGGSSGRIRRELGQIPP
CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHCCCCC
GDLRMALAALAPFDDEGLQWETLLQHRFGGHGALAGHAVGNLIIAGLCDTLGSEIAALDA
HHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAKVIKAEGRVLPACAEPLEIAAEVSGLDDDPRIMREVIGQVAVASTPGTVRRVRLIPER
HHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHEECCCCCCEEEEEECCCC
PEATEESVEAIENADLVTLGPGSWFSSVIPHVLVPGIPTALATTKALRVVVLNLSPEPGE
CCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHEEEEEEEECCCCCCC
TAGFTAERHIHILSQHAQTLRADVILVDEGLIPHKGERVHLERAAAVLGAQISYHDLSET
CCCCCHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEHHHHHHHHHHCCCEECCCCCC
DPSGRRIHRHDPAKLAEALRLQL
CCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]