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The map label for this gene is sufB [C]

Identifier: 38233880

GI number: 38233880

Start: 1302920

End: 1304299

Strand: Reverse

Name: sufB [C]

Synonym: DIP1295

Alternate gene names: 38233880

Gene position: 1304299-1302920 (Counterclockwise)

Preceding gene: 38233881

Following gene: 38233879

Centisome position: 52.41

GC content: 48.55

Gene sequence:

>1380_bases
ATGGGACCGTATAACTACGGTTGGCACGATTCCGATGAAGCTGGAAAGAAAGCTCGTCGTGGACTTGATGAAGACGTCGT
TCGCTATATTTCTGCACAGAAAAACGAACCTGAATGGATGCTCGAGCAACGTCTTAAGGCATTAAACACTTTTGAAAAAA
AGCCGATGCCGACGTGGGGCCCTGATCTTTCTTACATCAACTTTGATGACTTTAAATACTACGTCCGTTCCACGGAAAAA
CAGGCAACTACTTGGGACGATCTTCCTGAAGATATCAAGAACACCTACGACAAGTTGGGTATCCCAGAAGCCGAAAAACA
GCGACTTGTGGCCGGCGTAGCCGCACAATACGAGTCCGAAGTGGTCTATCACCAAATTCGTGAAGACCTGGAGACCCAAG
GCGTAATTTTCTTAGACACTGATACAGCGTTAAAAGAACATCCAGAGCTTTTCCAAGAATACTTTGGAACCGTCGTGCCT
GCAGGTGACAACAAGTTCTCTGCTCTTAACTCGGCTGTATGGTCTGGAGGATCCTTTGTCTATGTTCCTAAAGGTGTGCA
CGTGGAAATCCCGCTGCAGGCTTATTTCCGAATCAACACCGAGAATATGGGACAGTTTGAACGTACGTTGATCATCGTTG
ACGAAGGCGCATACGTCCACTACGTAGAAGGCTGTACCGCACCGATCTACCAGTCAGATTCTTTGCACTCTGCGGTCGTA
GAAATCATCGTGAAAAAGAATGCGCGGTGCCGATACACCACAATTCAGAACTGGTCGAATAACGTGTTGAATCTAGTGAC
ACAACGATCCAAGGTCGAAGAAGGTGGCACCATGGAGTGGGTCGATGGAAATATCGGCTCAAAGGTCACAATGAAGTACC
CAGCAGTTTGGATGGTTGGGCCACATGCGAAAGGCGAAGTCCTGTCCGCTGCTTTCGCGGGTGAAGGACAAATTCAAGAT
ACTGGAGCCAAAATGCAACACATGGCCCCTTATACGTCGTCCAATATTGTGTCAAAGTCAGTGGCTAGGTCGGGCGGACG
CGCAGCTTATCGTGGACTTGTGCGAGTAGCAGCAAATGCACACCATTCAGTATCAAACGTTGAATGTGACGCATTGCTGG
TCGACAATATTTCCCGTTCGGATACGTACCCGTACAACGACATTCGAAATGACCACGTTTCTCTTGGCCATGAGGCGACT
GTATCCCAGGTTTCAGAAGAGCAGTTGTTCTATTTACAGTCGCGAGGCATCGCGGAAGACGAAGCAATGGCCATGATCGT
GCGTGGCTTTGTTGAGCCGATTGCAAAAGAACTCCCAATGGAGTACGCACTCGAACTCAATCGCCTGATCGAATTGCAGA
TGGAAGGATCGGTGGGCTAA

Upstream 100 bases:

>100_bases
ATACTCCCACTGAAAGGAGCGGTTCATGACCTCGGCATCGCCAAAGACAGATGTGAATACAGCGAAAGCACCATCAACTG
ACGAAGAGATCATTAAGTCA

Downstream 100 bases:

>100_bases
ACATGTCGACAAATAAAGCCGCAACCGTGCACAACAACAAGGGCGATCTTTTTAGCTCTTTTAACGTTGAAGATTTTGAT
ACGCCACATGGCAAAGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MGPYNYGWHDSDEAGKKARRGLDEDVVRYISAQKNEPEWMLEQRLKALNTFEKKPMPTWGPDLSYINFDDFKYYVRSTEK
QATTWDDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLETQGVIFLDTDTALKEHPELFQEYFGTVVP
AGDNKFSALNSAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYQSDSLHSAVV
EIIVKKNARCRYTTIQNWSNNVLNLVTQRSKVEEGGTMEWVDGNIGSKVTMKYPAVWMVGPHAKGEVLSAAFAGEGQIQD
TGAKMQHMAPYTSSNIVSKSVARSGGRAAYRGLVRVAANAHHSVSNVECDALLVDNISRSDTYPYNDIRNDHVSLGHEAT
VSQVSEEQLFYLQSRGIAEDEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSVG

Sequences:

>Translated_459_residues
MGPYNYGWHDSDEAGKKARRGLDEDVVRYISAQKNEPEWMLEQRLKALNTFEKKPMPTWGPDLSYINFDDFKYYVRSTEK
QATTWDDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLETQGVIFLDTDTALKEHPELFQEYFGTVVP
AGDNKFSALNSAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYQSDSLHSAVV
EIIVKKNARCRYTTIQNWSNNVLNLVTQRSKVEEGGTMEWVDGNIGSKVTMKYPAVWMVGPHAKGEVLSAAFAGEGQIQD
TGAKMQHMAPYTSSNIVSKSVARSGGRAAYRGLVRVAANAHHSVSNVECDALLVDNISRSDTYPYNDIRNDHVSLGHEAT
VSQVSEEQLFYLQSRGIAEDEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSVG
>Mature_458_residues
GPYNYGWHDSDEAGKKARRGLDEDVVRYISAQKNEPEWMLEQRLKALNTFEKKPMPTWGPDLSYINFDDFKYYVRSTEKQ
ATTWDDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESEVVYHQIREDLETQGVIFLDTDTALKEHPELFQEYFGTVVPA
GDNKFSALNSAVWSGGSFVYVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYQSDSLHSAVVE
IIVKKNARCRYTTIQNWSNNVLNLVTQRSKVEEGGTMEWVDGNIGSKVTMKYPAVWMVGPHAKGEVLSAAFAGEGQIQDT
GAKMQHMAPYTSSNIVSKSVARSGGRAAYRGLVRVAANAHHSVSNVECDALLVDNISRSDTYPYNDIRNDHVSLGHEATV
SQVSEEQLFYLQSRGIAEDEAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=485, Percent_Identity=40, Blast_Score=370, Evalue=1e-103,
Organism=Escherichia coli, GI1787971, Length=154, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 51507; Mature: 51376

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPYNYGWHDSDEAGKKARRGLDEDVVRYISAQKNEPEWMLEQRLKALNTFEKKPMPTWG
CCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDLSYINFDDFKYYVRSTEKQATTWDDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESE
CCCCEEEHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VVYHQIREDLETQGVIFLDTDTALKEHPELFQEYFGTVVPAGDNKFSALNSAVWSGGSFV
HHHHHHHHHHHHCCEEEEECCHHHHHCHHHHHHHHCEEECCCCCHHHHHHHHHHCCCCEE
YVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYQSDSLHSAVV
EECCCCEEEECEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCHHHHHH
EIIVKKNARCRYTTIQNWSNNVLNLVTQRSKVEEGGTMEWVDGNIGSKVTMKYPAVWMVG
HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCEEEEEC
PHAKGEVLSAAFAGEGQIQDTGAKMQHMAPYTSSNIVSKSVARSGGRAAYRGLVRVAANA
CCCCCCHHHHHHCCCCCEECCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC
HHSVSNVECDALLVDNISRSDTYPYNDIRNDHVSLGHEATVSQVSEEQLFYLQSRGIAED
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH
EAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSVG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCC
>Mature Secondary Structure 
GPYNYGWHDSDEAGKKARRGLDEDVVRYISAQKNEPEWMLEQRLKALNTFEKKPMPTWG
CCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDLSYINFDDFKYYVRSTEKQATTWDDLPEDIKNTYDKLGIPEAEKQRLVAGVAAQYESE
CCCCEEEHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VVYHQIREDLETQGVIFLDTDTALKEHPELFQEYFGTVVPAGDNKFSALNSAVWSGGSFV
HHHHHHHHHHHHCCEEEEECCHHHHHCHHHHHHHHCEEECCCCCHHHHHHHHHHCCCCEE
YVPKGVHVEIPLQAYFRINTENMGQFERTLIIVDEGAYVHYVEGCTAPIYQSDSLHSAVV
EECCCCEEEECEEEEEEECCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCCCCHHHHHH
EIIVKKNARCRYTTIQNWSNNVLNLVTQRSKVEEGGTMEWVDGNIGSKVTMKYPAVWMVG
HHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCEEEEEC
PHAKGEVLSAAFAGEGQIQDTGAKMQHMAPYTSSNIVSKSVARSGGRAAYRGLVRVAANA
CCCCCCHHHHHHCCCCCEECCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC
HHSVSNVECDALLVDNISRSDTYPYNDIRNDHVSLGHEATVSQVSEEQLFYLQSRGIAED
CCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH
EAMAMIVRGFVEPIAKELPMEYALELNRLIELQMEGSVG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA