| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233789
Identifier: 38233789
GI number: 38233789
Start: 1199016
End: 1200020
Strand: Reverse
Name: 38233789
Synonym: DIP1199
Alternate gene names: NA
Gene position: 1200020-1199016 (Counterclockwise)
Preceding gene: 38233791
Following gene: 38233780
Centisome position: 48.22
GC content: 46.57
Gene sequence:
>1005_bases ATGGAGATTCATTCTTCCGCGGCTGCAGAGGTTTTTCCAGTTTGCCGGAGCCTTCTAGGAAAATTGCCAGCACATTCACA TAATCGTTCGGTTGCTCCCACGGTCTGCGACTATTATCCCCAAATAATGAAAACTTATAATTCAAAGATGACCACTCAAC ACAGTTCCGATATTCGGAACTCACAAAACATATCCGCGTCTTTTGTAACTCCTCATGATGCACCCGTTACTTCACGCAAG TATGTTCCTAAGTTCAATTCCAATAACCATAGAATAAAAACTGCAGCAGCCTTCGAAAAAGGCTCCGACATATATCACGC AGTCCGCCCCAATTATCCCAATTCGGTAATTGAACTTTTAAATCTCTCCCCTAATAGCAGGGTGCTCGATATCGGATGCG GCACCGGTAAGCTAACGGAGCAAATCGCACAACAGACAAGCTCCGTCTATGCTCTGGACCCAAGCAAAGACATGCTTGAT TCGTTTCGTTCCACACTTGACATCCCCTCTTGGCAAGCTACTGCTGAACAAACTGCAGTTTCAGATTCTCGCTTTTCGAC GCTTACTTGTGCACAAACATGGCACTGGGTAGAACCTCTTGCAGCTAGTGCCGAACTCGACAGAATTAGCACCGACGACG CGCAGTTGCTCTTAGTGTGGAATACTCTTGATGTCTCCGTACCGTGGGTTCACCGCCTTAGCCGTATTATGCATTCAGGC GATACCCTCGCCGAGGGGTTTATTCCCCACGTCGCACAACCGTGGGAACTAGTATCTGTTCTCCGCGGAAAACATGCCCA AGAGCTATACCCCGACCAGATACATACTCTCGCCCACACTCGTTCGTATTGGCTACGTGCATCCGAAAAAACAAGAGAAA AACTAACACATAACCTCTCGTGGTATCTCACCGATCACCTCGAATTACCTAGCACATCTTTGGTGGAAATCCCTTATCGT TTCGACGCATTTTTATATAAAAAAGCGCTAGTCAAAACTCAATAA
Upstream 100 bases:
>100_bases CCAAACGGCATAAACTATCATCAGCAATGAAACAACGCATAACCCCATGAAAAACCACATCATGAGTGGTTGCGTAAGGC TAATCGATAAAACCCGACTC
Downstream 100 bases:
>100_bases GAGCTTGACTAGCACCTACTCACTTCTACTCTAAAGAAGTACTTGGGCTAATACAGTTCCCACAATGCAAGAAACAATAA CGCATATAAAGCCAGGAATA
Product: putative methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MEIHSSAAAEVFPVCRSLLGKLPAHSHNRSVAPTVCDYYPQIMKTYNSKMTTQHSSDIRNSQNISASFVTPHDAPVTSRK YVPKFNSNNHRIKTAAAFEKGSDIYHAVRPNYPNSVIELLNLSPNSRVLDIGCGTGKLTEQIAQQTSSVYALDPSKDMLD SFRSTLDIPSWQATAEQTAVSDSRFSTLTCAQTWHWVEPLAASAELDRISTDDAQLLLVWNTLDVSVPWVHRLSRIMHSG DTLAEGFIPHVAQPWELVSVLRGKHAQELYPDQIHTLAHTRSYWLRASEKTREKLTHNLSWYLTDHLELPSTSLVEIPYR FDAFLYKKALVKTQ
Sequences:
>Translated_334_residues MEIHSSAAAEVFPVCRSLLGKLPAHSHNRSVAPTVCDYYPQIMKTYNSKMTTQHSSDIRNSQNISASFVTPHDAPVTSRK YVPKFNSNNHRIKTAAAFEKGSDIYHAVRPNYPNSVIELLNLSPNSRVLDIGCGTGKLTEQIAQQTSSVYALDPSKDMLD SFRSTLDIPSWQATAEQTAVSDSRFSTLTCAQTWHWVEPLAASAELDRISTDDAQLLLVWNTLDVSVPWVHRLSRIMHSG DTLAEGFIPHVAQPWELVSVLRGKHAQELYPDQIHTLAHTRSYWLRASEKTREKLTHNLSWYLTDHLELPSTSLVEIPYR FDAFLYKKALVKTQ >Mature_334_residues MEIHSSAAAEVFPVCRSLLGKLPAHSHNRSVAPTVCDYYPQIMKTYNSKMTTQHSSDIRNSQNISASFVTPHDAPVTSRK YVPKFNSNNHRIKTAAAFEKGSDIYHAVRPNYPNSVIELLNLSPNSRVLDIGCGTGKLTEQIAQQTSSVYALDPSKDMLD SFRSTLDIPSWQATAEQTAVSDSRFSTLTCAQTWHWVEPLAASAELDRISTDDAQLLLVWNTLDVSVPWVHRLSRIMHSG DTLAEGFIPHVAQPWELVSVLRGKHAQELYPDQIHTLAHTRSYWLRASEKTREKLTHNLSWYLTDHLELPSTSLVEIPYR FDAFLYKKALVKTQ
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 37672; Mature: 37672
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIHSSAAAEVFPVCRSLLGKLPAHSHNRSVAPTVCDYYPQIMKTYNSKMTTQHSSDIRN CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCC SQNISASFVTPHDAPVTSRKYVPKFNSNNHRIKTAAAFEKGSDIYHAVRPNYPNSVIELL CCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCEEEECCCCCCHHHHHHH NLSPNSRVLDIGCGTGKLTEQIAQQTSSVYALDPSKDMLDSFRSTLDIPSWQATAEQTAV CCCCCCEEEEEECCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHC SDSRFSTLTCAQTWHWVEPLAASAELDRISTDDAQLLLVWNTLDVSVPWVHRLSRIMHSG CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCC DTLAEGFIPHVAQPWELVSVLRGKHAQELYPDQIHTLAHTRSYWLRASEKTREKLTHNLS CHHHHCCCCCCCCHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCE WYLTDHLELPSTSLVEIPYRFDAFLYKKALVKTQ EEEEECCCCCCCCEEECCHHHHHHHHHHHHHCCC >Mature Secondary Structure MEIHSSAAAEVFPVCRSLLGKLPAHSHNRSVAPTVCDYYPQIMKTYNSKMTTQHSSDIRN CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCC SQNISASFVTPHDAPVTSRKYVPKFNSNNHRIKTAAAFEKGSDIYHAVRPNYPNSVIELL CCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCCEEEECCCCCCHHHHHHH NLSPNSRVLDIGCGTGKLTEQIAQQTSSVYALDPSKDMLDSFRSTLDIPSWQATAEQTAV CCCCCCEEEEEECCCCHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHC SDSRFSTLTCAQTWHWVEPLAASAELDRISTDDAQLLLVWNTLDVSVPWVHRLSRIMHSG CCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHCC DTLAEGFIPHVAQPWELVSVLRGKHAQELYPDQIHTLAHTRSYWLRASEKTREKLTHNLS CHHHHCCCCCCCCHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCE WYLTDHLELPSTSLVEIPYRFDAFLYKKALVKTQ EEEEECCCCCCCCEEECCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]