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The map label for this gene is yqjC [H]

Identifier: 38233651

GI number: 38233651

Start: 1037086

End: 1037544

Strand: Reverse

Name: yqjC [H]

Synonym: DIP1057

Alternate gene names: 38233651

Gene position: 1037544-1037086 (Counterclockwise)

Preceding gene: 38233653

Following gene: 38233633

Centisome position: 41.69

GC content: 52.94

Gene sequence:

>459_bases
ATGAGTACCGATATTTCAGCCATTGATATTCCACACGAGCTCGTTATCTGCCTCGACCACGTAGGCATCGCAGTTCCAGA
CTTCGACGCAGCCGTCGAATTCTACCGTTCTGCATTCGGCTGGGTTAACCATCACGATGAGGTTAACGAGGAGCAAGGCG
TTCATGAGGCCATGATTGGACCTAAGAACCTCAAGGAAACCGATGGAATGATCCAGATTCTCGCTCCATTGAACGAAGAA
TCCACCATTGCTAAGTTCATCGACAAGAAGGGCCCAGGCTTGCAGCAAATGTGCCTGCGCACCTCAGACATCGACGCGCT
CTCTGAGCACCTCAAGGCTCAGGGCGTTCGCCTTCTCTACCCAGAACCAAAGAACGGCACCGCTGGTGCTCGTATTAACT
TTGTTCACCCAAAGGATGCCGGCGGCGTCCTCCTAGAGCTCACCGAGCCACAGAAGTAA

Upstream 100 bases:

>100_bases
TGCAAGAATCATGTCAATGAGCATAGTCTCACATTCCAAATATGGTTTGAATGGACAAAATCCGCACACATGGCAGTAGA
TGTAGCTAAAGTTGAAAACC

Downstream 100 bases:

>100_bases
AGCGTTTCTAGCCAAGAGCGGCCGGTTTCCCTTGTAGTCAAGGGGGAAACCGGCCGCTCTTTTGCATTAGCTGTTTATTA
GCGACGTTCCCAACACGAAC

Product: putative methylmalonyl-CoA epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSTDISAIDIPHELVICLDHVGIAVPDFDAAVEFYRSAFGWVNHHDEVNEEQGVHEAMIGPKNLKETDGMIQILAPLNEE
STIAKFIDKKGPGLQQMCLRTSDIDALSEHLKAQGVRLLYPEPKNGTAGARINFVHPKDAGGVLLELTEPQK

Sequences:

>Translated_152_residues
MSTDISAIDIPHELVICLDHVGIAVPDFDAAVEFYRSAFGWVNHHDEVNEEQGVHEAMIGPKNLKETDGMIQILAPLNEE
STIAKFIDKKGPGLQQMCLRTSDIDALSEHLKAQGVRLLYPEPKNGTAGARINFVHPKDAGGVLLELTEPQK
>Mature_151_residues
STDISAIDIPHELVICLDHVGIAVPDFDAAVEFYRSAFGWVNHHDEVNEEQGVHEAMIGPKNLKETDGMIQILAPLNEES
TIAKFIDKKGPGLQQMCLRTSDIDALSEHLKAQGVRLLYPEPKNGTAGARINFVHPKDAGGVLLELTEPQK

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=133, Percent_Identity=36.8421052631579, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17506387, Length=134, Percent_Identity=36.5671641791045, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 16679; Mature: 16548

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDISAIDIPHELVICLDHVGIAVPDFDAAVEFYRSAFGWVNHHDEVNEEQGVHEAMIG
CCCCCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHCC
PKNLKETDGMIQILAPLNEESTIAKFIDKKGPGLQQMCLRTSDIDALSEHLKAQGVRLLY
CCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCEEEEC
PEPKNGTAGARINFVHPKDAGGVLLELTEPQK
CCCCCCCCCCEEEEECCCCCCCEEEEECCCCC
>Mature Secondary Structure 
STDISAIDIPHELVICLDHVGIAVPDFDAAVEFYRSAFGWVNHHDEVNEEQGVHEAMIG
CCCCCEECCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCHHHHHCC
PKNLKETDGMIQILAPLNEESTIAKFIDKKGPGLQQMCLRTSDIDALSEHLKAQGVRLLY
CCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCEEEEC
PEPKNGTAGARINFVHPKDAGGVLLELTEPQK
CCCCCCCCCCEEEEECCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]