Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
---|---|
Accession | NC_005139 |
Length | 3,354,505 |
Click here to switch to the map view.
The map label for this gene is zntB [H]
Identifier: 37680811
GI number: 37680811
Start: 2657077
End: 2658006
Strand: Direct
Name: zntB [H]
Synonym: VV2627
Alternate gene names: 37680811
Gene position: 2657077-2658006 (Clockwise)
Preceding gene: 161486609
Following gene: 37680813
Centisome position: 79.21
GC content: 47.1
Gene sequence:
>930_bases ATGGGATTTTTGATCGATCACTGGGATTTTTCCACCACACCGGCCAGCCAGCCAGATAACAATTTTCAAACGATAAAAGC GAATCACTGGTACCACTGTGAACGCCATCATCCAGACATTCGCACTTGGTTACTCGAAAACCAAGTGCCACTTAGCACCG TGAACCATCTATTGGCTGATGAAACGCGCCCCTCTTTCCATCGTTATGACGACGACAGCTTTATGCTGATCTTGCGTGGC GTCAATATGAATGAAAACGCTGTGCCGGAAGATATGCTCAGTATCCGGATTCTCTATTTCAATGGCACCCTGATCTCCAC ACGCAAAACATCCTCCAAAGCCATTTCTGAAATTCGCGAAGCGCTGGTTGAGCAAAAAGGTCCCGCGGCGATTGCCGATC TTTTGCTGGCGATTGTTGATGGTTTAACCGGCAAAATGCAGCACTATCTGTTGGATATTGAGGAACAGATTGAGCAGTTC GAACTCGATACCGATCAGATTGGTGACATCATTGAAGTGCAAAAAGCGCTGTTGAGGATCAAACGCTTTATTCGCCCGCA GCAATACGCCATTGCAGATTTCGCTATGGCCGAACTGGGTTTGTTGGAGAAAAAGCAGCTGATGCTCAATTACGCGTTGA GTAACATTACCCGCATTAACGAAACCATTGATTTCTTTCTGGGTGAATTGGCGCTGCTCAAAGAACAAATTCAGCAGTTG CGCGAAGACAAAATCAGCCGCAACAGCTATCTGTTTACATTAATCGCCAGTATTTTCTTGCCCACCAGTTTTCTCACCGG CCTACTCGGTATCAACATTGGCGGCATACCCGGTGTGGAATCGCCACTCGCCTTCTTATGGTTCTGTATTGGGTTGGTGG TCATTTTTGCCGCCGAAGTGTTACTACTCAAGCGGCTCAAATTCTGGTGA
Upstream 100 bases:
>100_bases TGATCTTTCCCTAAGATATTTGCACAATGATTAGAGTAGCCAAACTCCCCCAAGTCGCGTAACTTGGGGTGAGTTTCATT CACCAAAGCGACTCTTTGTT
Downstream 100 bases:
>100_bases TGCTTACACTTTTACGCGGTCTGGGTGGATAACCACACAGGCCGTGTGTTTCTGTTTACCAAAGCCGATGATCTGCGCTA ACGCTTTTTTACTCACCGTC
Product: Mg2+ and Co2+ transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MGFLIDHWDFSTTPASQPDNNFQTIKANHWYHCERHHPDIRTWLLENQVPLSTVNHLLADETRPSFHRYDDDSFMLILRG VNMNENAVPEDMLSIRILYFNGTLISTRKTSSKAISEIREALVEQKGPAAIADLLLAIVDGLTGKMQHYLLDIEEQIEQF ELDTDQIGDIIEVQKALLRIKRFIRPQQYAIADFAMAELGLLEKKQLMLNYALSNITRINETIDFFLGELALLKEQIQQL REDKISRNSYLFTLIASIFLPTSFLTGLLGINIGGIPGVESPLAFLWFCIGLVVIFAAEVLLLKRLKFW
Sequences:
>Translated_309_residues MGFLIDHWDFSTTPASQPDNNFQTIKANHWYHCERHHPDIRTWLLENQVPLSTVNHLLADETRPSFHRYDDDSFMLILRG VNMNENAVPEDMLSIRILYFNGTLISTRKTSSKAISEIREALVEQKGPAAIADLLLAIVDGLTGKMQHYLLDIEEQIEQF ELDTDQIGDIIEVQKALLRIKRFIRPQQYAIADFAMAELGLLEKKQLMLNYALSNITRINETIDFFLGELALLKEQIQQL REDKISRNSYLFTLIASIFLPTSFLTGLLGINIGGIPGVESPLAFLWFCIGLVVIFAAEVLLLKRLKFW >Mature_308_residues GFLIDHWDFSTTPASQPDNNFQTIKANHWYHCERHHPDIRTWLLENQVPLSTVNHLLADETRPSFHRYDDDSFMLILRGV NMNENAVPEDMLSIRILYFNGTLISTRKTSSKAISEIREALVEQKGPAAIADLLLAIVDGLTGKMQHYLLDIEEQIEQFE LDTDQIGDIIEVQKALLRIKRFIRPQQYAIADFAMAELGLLEKKQLMLNYALSNITRINETIDFFLGELALLKEQIQQLR EDKISRNSYLFTLIASIFLPTSFLTGLLGINIGGIPGVESPLAFLWFCIGLVVIFAAEVLLLKRLKFW
Specific function: Mediates efflux of zinc ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI1787604, Length=312, Percent_Identity=29.1666666666667, Blast_Score=128, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 35392; Mature: 35261
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLIDHWDFSTTPASQPDNNFQTIKANHWYHCERHHPDIRTWLLENQVPLSTVNHLLAD CCCEEECCCCCCCCCCCCCCCCEEEECCCCEECCCCCCHHHHHHHCCCCCHHHHHHHHHC ETRPSFHRYDDDSFMLILRGVNMNENAVPEDMLSIRILYFNGTLISTRKTSSKAISEIRE CCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHEEEEEEEECEEEECCCHHHHHHHHHHH ALVEQKGPAAIADLLLAIVDGLTGKMQHYLLDIEEQIEQFELDTDQIGDIIEVQKALLRI HHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KRFIRPQQYAIADFAMAELGLLEKKQLMLNYALSNITRINETIDFFLGELALLKEQIQQL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REDKISRNSYLFTLIASIFLPTSFLTGLLGINIGGIPGVESPLAFLWFCIGLVVIFAAEV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LLLKRLKFW HHHHHHCCC >Mature Secondary Structure GFLIDHWDFSTTPASQPDNNFQTIKANHWYHCERHHPDIRTWLLENQVPLSTVNHLLAD CCEEECCCCCCCCCCCCCCCCEEEECCCCEECCCCCCHHHHHHHCCCCCHHHHHHHHHC ETRPSFHRYDDDSFMLILRGVNMNENAVPEDMLSIRILYFNGTLISTRKTSSKAISEIRE CCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHEEEEEEEECEEEECCCHHHHHHHHHHH ALVEQKGPAAIADLLLAIVDGLTGKMQHYLLDIEEQIEQFELDTDQIGDIIEVQKALLRI HHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH KRFIRPQQYAIADFAMAELGLLEKKQLMLNYALSNITRINETIDFFLGELALLKEQIQQL HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH REDKISRNSYLFTLIASIFLPTSFLTGLLGINIGGIPGVESPLAFLWFCIGLVVIFAAEV HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LLLKRLKFW HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA