Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680747
Identifier: 37680747
GI number: 37680747
Start: 2592799
End: 2593836
Strand: Direct
Name: 37680747
Synonym: VV2563
Alternate gene names: NA
Gene position: 2592799-2593836 (Clockwise)
Preceding gene: 37680744
Following gene: 37680749
Centisome position: 77.29
GC content: 48.36
Gene sequence:
>1038_bases ATGGATACCATACACACTCTCAGTCAACTCCTTACCGCCAGCGACTGCCAATATGCCATTTATGATTTGGGCCGCCGTAT CAATCCAATCAGCCAAACGCAATTTGCCGAGATAGAAAAAGGCTCAGCGCCTTATCCTTACCCTCTGCAACGGAAAGCCA ATTTGGCGATTGTGTATTGGAATGAGCAAAAGCAACCATGGATTTGGTTTTTGAAATTTGAACTCGACGAGCGTGGTCTA TTGAAGCAAGCCGACATCGGCAACTTCATTAAATTTGTCGTAGAAGCGATGGGAACGCGTTTATCGCAAGAAATGAGTGA AGAACAGCAACAGAAGTTGGCGAATAATCCTTATACGTTTAAGCCTTCTGAAGACAAAATGGCGGTGTTTCATAGCTTGG TGCGCGCGCAATTGCAGTTACCGACCAGCCAATATTACGAACACGCCCAAATCTATTTCCAAGGGAAATTGGGTTGGGAA AACTGGCAAACCGTTGGCTTGCAGGGCATTACCGACATCTGTGCTCGATTGGATCAAGAGCAAAATGGCGTGCTAATACG CAAGGCGCTGACGCACCTTCCTTCAACCCCATTGTATGCTCTGCTTGGTGCTTTAGAGCATATCACTCTGCCTGAAAAGC TAACGGCCCGCTTAATCGAGCTCACTGAAGGTGAAATCGCCAAGCCACACCCTGATCTGTTTTTGCTCTCTGCGCTGATT CGTGCGCTGTCAGGCGCAGAGCAAGCACAAGTGAAACCCCTGCTGAACACACTGCTCGCCAGTCCTAGATTGAGCCATCA GGAAGTGTTGATTGGTATTGCCGGTCGCGCTTGGCATTGGTTGGCTGAAACGGAGGTCGCACAGCTCTTTTTGGTTCGTT TGGCACAAACGGGTAATCAAAACCTGTTTAACCAGCTGTTTGCCGACTTAGTGATGCTTCCACAGCTCAGAATGGTGCTA TTGCCTCTGCTGCACTCCAGCCCATCACCAGAGCTGGCCAATGCACTTTTAAATCTACAACAGGCTACGAAAGGATAA
Upstream 100 bases:
>100_bases CAAAGTTGAGGTGTTTGTCATTAATCTTTACATTCCAAACCTTGAATTAGCCGCGAATGATACCATTTATTGAAGAAATA AAGTTAGGACAACATGCTTC
Downstream 100 bases:
>100_bases ACCATGGTCGGTGATTTGTTTGCCATCTTAGGATTGTGTTTCTTCTGTTTTCTCTTTTGGCAACAACGTCGCCAATCGGA ACTGGCCAAGGCTGCGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MDTIHTLSQLLTASDCQYAIYDLGRRINPISQTQFAEIEKGSAPYPYPLQRKANLAIVYWNEQKQPWIWFLKFELDERGL LKQADIGNFIKFVVEAMGTRLSQEMSEEQQQKLANNPYTFKPSEDKMAVFHSLVRAQLQLPTSQYYEHAQIYFQGKLGWE NWQTVGLQGITDICARLDQEQNGVLIRKALTHLPSTPLYALLGALEHITLPEKLTARLIELTEGEIAKPHPDLFLLSALI RALSGAEQAQVKPLLNTLLASPRLSHQEVLIGIAGRAWHWLAETEVAQLFLVRLAQTGNQNLFNQLFADLVMLPQLRMVL LPLLHSSPSPELANALLNLQQATKG
Sequences:
>Translated_345_residues MDTIHTLSQLLTASDCQYAIYDLGRRINPISQTQFAEIEKGSAPYPYPLQRKANLAIVYWNEQKQPWIWFLKFELDERGL LKQADIGNFIKFVVEAMGTRLSQEMSEEQQQKLANNPYTFKPSEDKMAVFHSLVRAQLQLPTSQYYEHAQIYFQGKLGWE NWQTVGLQGITDICARLDQEQNGVLIRKALTHLPSTPLYALLGALEHITLPEKLTARLIELTEGEIAKPHPDLFLLSALI RALSGAEQAQVKPLLNTLLASPRLSHQEVLIGIAGRAWHWLAETEVAQLFLVRLAQTGNQNLFNQLFADLVMLPQLRMVL LPLLHSSPSPELANALLNLQQATKG >Mature_345_residues MDTIHTLSQLLTASDCQYAIYDLGRRINPISQTQFAEIEKGSAPYPYPLQRKANLAIVYWNEQKQPWIWFLKFELDERGL LKQADIGNFIKFVVEAMGTRLSQEMSEEQQQKLANNPYTFKPSEDKMAVFHSLVRAQLQLPTSQYYEHAQIYFQGKLGWE NWQTVGLQGITDICARLDQEQNGVLIRKALTHLPSTPLYALLGALEHITLPEKLTARLIELTEGEIAKPHPDLFLLSALI RALSGAEQAQVKPLLNTLLASPRLSHQEVLIGIAGRAWHWLAETEVAQLFLVRLAQTGNQNLFNQLFADLVMLPQLRMVL LPLLHSSPSPELANALLNLQQATKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39026; Mature: 39026
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTIHTLSQLLTASDCQYAIYDLGRRINPISQTQFAEIEKGSAPYPYPLQRKANLAIVYW CCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEE NEQKQPWIWFLKFELDERGLLKQADIGNFIKFVVEAMGTRLSQEMSEEQQQKLANNPYTF CCCCCCEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KPSEDKMAVFHSLVRAQLQLPTSQYYEHAQIYFQGKLGWENWQTVGLQGITDICARLDQE CCCCHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCCCCCHHHHCHHHHHHHHHHCCCC QNGVLIRKALTHLPSTPLYALLGALEHITLPEKLTARLIELTEGEIAKPHPDLFLLSALI CCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH RALSGAEQAQVKPLLNTLLASPRLSHQEVLIGIAGRAWHWLAETEVAQLFLVRLAQTGNQ HHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCH NLFNQLFADLVMLPQLRMVLLPLLHSSPSPELANALLNLQQATKG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTIHTLSQLLTASDCQYAIYDLGRRINPISQTQFAEIEKGSAPYPYPLQRKANLAIVYW CCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEE NEQKQPWIWFLKFELDERGLLKQADIGNFIKFVVEAMGTRLSQEMSEEQQQKLANNPYTF CCCCCCEEEEEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC KPSEDKMAVFHSLVRAQLQLPTSQYYEHAQIYFQGKLGWENWQTVGLQGITDICARLDQE CCCCHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEECCCCCCHHHHCHHHHHHHHHHCCCC QNGVLIRKALTHLPSTPLYALLGALEHITLPEKLTARLIELTEGEIAKPHPDLFLLSALI CCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH RALSGAEQAQVKPLLNTLLASPRLSHQEVLIGIAGRAWHWLAETEVAQLFLVRLAQTGNQ HHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCH NLFNQLFADLVMLPQLRMVLLPLLHSSPSPELANALLNLQQATKG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA