Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is yaeH [C]
Identifier: 37680744
GI number: 37680744
Start: 2591190
End: 2591573
Strand: Direct
Name: yaeH [C]
Synonym: VV2560
Alternate gene names: 37680744
Gene position: 2591190-2591573 (Clockwise)
Preceding gene: 37680743
Following gene: 37680747
Centisome position: 77.25
GC content: 39.32
Gene sequence:
>384_bases ATGTATCCACACCTCACTGGACTGGGTATTCATGATCCTAGCCAGATTGAACGCTATTCACTACGTCAGGAAGCGCACAA AGACGTATTAAAAATCTATTTCCACAAGCAAAAAGGCGAGTTTTTTGCCAAAAGCGTGAAATTCAAGTATCCACGACAAG TCAAAAATGTCTTAGTTGATAGCGGTAGTCATCAATATAAAGAAGTCACGGAAATTAATCGCAACCTCACTTTAGTCATT GATGAGCTAAATAAAATCACCAAGCCACCCAAACAAGAAGATGTGGATATCAAACAAAAGATCCTCACCGATCTGAAGCA TCTTGAAAAAGTGGTGGCGAGCAAAATTGCCGAAATTGAAGCGGATCTCGAAAAACTCAAATAA
Upstream 100 bases:
>100_bases TCGTGCACAACTTAGTCAATTGGTCGGATTATCAGCTATCTACCACATGATTTGACTGCTACATTGAATCTTAACAGTCA TACCTAAATAGAGGTCGCTT
Downstream 100 bases:
>100_bases GCGAAGCTCGCCTCATTGGTTTAAAACTGCATAAATGGCAAAGGGTTGATATGACATCAACCCTTTTTACTGTGCTCACC CTAGTATGAGTGAATCAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MYPHLTGLGIHDPSQIERYSLRQEAHKDVLKIYFHKQKGEFFAKSVKFKYPRQVKNVLVDSGSHQYKEVTEINRNLTLVI DELNKITKPPKQEDVDIKQKILTDLKHLEKVVASKIAEIEADLEKLK
Sequences:
>Translated_127_residues MYPHLTGLGIHDPSQIERYSLRQEAHKDVLKIYFHKQKGEFFAKSVKFKYPRQVKNVLVDSGSHQYKEVTEINRNLTLVI DELNKITKPPKQEDVDIKQKILTDLKHLEKVVASKIAEIEADLEKLK >Mature_127_residues MYPHLTGLGIHDPSQIERYSLRQEAHKDVLKIYFHKQKGEFFAKSVKFKYPRQVKNVLVDSGSHQYKEVTEINRNLTLVI DELNKITKPPKQEDVDIKQKILTDLKHLEKVVASKIAEIEADLEKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0325 family
Homologues:
Organism=Escherichia coli, GI1786359, Length=126, Percent_Identity=63.4920634920635, Blast_Score=158, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1856_VIBVU (Q8DBG4)
Other databases:
- EMBL: AE016795 - RefSeq: NP_760732.1 - GeneID: 1178758 - GenomeReviews: AE016795_GR - KEGG: vvu:VV1_1856 - HOGENOM: HBG298613 - OMA: NLRYVIE - ProtClustDB: PRK13677 - BioCyc: VVUL216895:VV1_1856-MONOMER - HAMAP: MF_01519 - InterPro: IPR020911
Pfam domain/function: PF11944 DUF3461
EC number: NA
Molecular weight: Translated: 14822; Mature: 14822
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPHLTGLGIHDPSQIERYSLRQEAHKDVLKIYFHKQKGEFFAKSVKFKYPRQVKNVLVD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHC SGSHQYKEVTEINRNLTLVIDELNKITKPPKQEDVDIKQKILTDLKHLEKVVASKIAEIE CCCHHHHHHHHHCCCHHEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ADLEKLK HHHHHCC >Mature Secondary Structure MYPHLTGLGIHDPSQIERYSLRQEAHKDVLKIYFHKQKGEFFAKSVKFKYPRQVKNVLVD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHC SGSHQYKEVTEINRNLTLVIDELNKITKPPKQEDVDIKQKILTDLKHLEKVVASKIAEIE CCCHHHHHHHHHCCCHHEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ADLEKLK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA