Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680718
Identifier: 37680718
GI number: 37680718
Start: 2563757
End: 2564446
Strand: Direct
Name: 37680718
Synonym: VV2534
Alternate gene names: NA
Gene position: 2563757-2564446 (Clockwise)
Preceding gene: 37680717
Following gene: 37680723
Centisome position: 76.43
GC content: 46.23
Gene sequence:
>690_bases ATGACCCCTTCCAGTAACCCGTTTGTCATGATGCTTGACATATTTCGCTCTCCAACCTCATGTTTTCTCGCGCTTTATCA GCGTGGTGCTTGGGGCTGGCAACCGTACATCGTTCTCATATTAACCCCATTCCTGTTCTGGGGAGCGTATTTTTCTAATG TGGACTTCCAGTGGTTGAGCCAAATTTTAACCCCTCAATTTCAACAAATTAATCCAGAACAATTAAAATTCTTGGACGAC CCAAACACCTTGATGGCGAGTGAGATCATTAGCGATGTGTTTGGACGAACCTTGACGATTTTGATGTTGGCATTTTGGTT CACTCTGGCAACCAAGCCCAGCCAGCATCAACACGGGTTTTGGAAATGGTTTGCCGCTGCCGCAGTGATCACCTTCCCAG CGGTGTTAGGCGACTTCGCTAGCTATGCAAGTTTGATATTGAAACATGGTCAAGTGGTGATTTACGCCGCCGATCTCAAT AGTCTCAATGGGTTGATCAAGCTACCATTGACAAACGAATGGTCTCAGTTTGCGAGTTCAATGCCTTTGCTACTTCCTTG GTACATTGTGCTTGGTTATGCAGCCGTGCTGACATGGACAGAGTTTGAACGTGGACAAGCTTTGGTGATCGCCGCCCTTC CTTGGGTGGGATACTATCTGATTTGGGCTATTTATCTGTTGGTAATGTAA
Upstream 100 bases:
>100_bases AAAGCAACGACATTGTGAAGTGGAACGCGCTACAAAATCAAAAGTACCTGAAACCAGGTCAACAATTAAAACTCTACGTG GATGTAACTAAGGTAAGTGT
Downstream 100 bases:
>100_bases AGCTGACCAACAGTGGATTATGATCAGAGGCGTCCGTTTGAGGCGCCTCTGCTTTTTGTACTTCTAAGCCTTTGTAAAAC ACATGATCAAGCGGCAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MTPSSNPFVMMLDIFRSPTSCFLALYQRGAWGWQPYIVLILTPFLFWGAYFSNVDFQWLSQILTPQFQQINPEQLKFLDD PNTLMASEIISDVFGRTLTILMLAFWFTLATKPSQHQHGFWKWFAAAAVITFPAVLGDFASYASLILKHGQVVIYAADLN SLNGLIKLPLTNEWSQFASSMPLLLPWYIVLGYAAVLTWTEFERGQALVIAALPWVGYYLIWAIYLLVM
Sequences:
>Translated_229_residues MTPSSNPFVMMLDIFRSPTSCFLALYQRGAWGWQPYIVLILTPFLFWGAYFSNVDFQWLSQILTPQFQQINPEQLKFLDD PNTLMASEIISDVFGRTLTILMLAFWFTLATKPSQHQHGFWKWFAAAAVITFPAVLGDFASYASLILKHGQVVIYAADLN SLNGLIKLPLTNEWSQFASSMPLLLPWYIVLGYAAVLTWTEFERGQALVIAALPWVGYYLIWAIYLLVM >Mature_228_residues TPSSNPFVMMLDIFRSPTSCFLALYQRGAWGWQPYIVLILTPFLFWGAYFSNVDFQWLSQILTPQFQQINPEQLKFLDDP NTLMASEIISDVFGRTLTILMLAFWFTLATKPSQHQHGFWKWFAAAAVITFPAVLGDFASYASLILKHGQVVIYAADLNS LNGLIKLPLTNEWSQFASSMPLLLPWYIVLGYAAVLTWTEFERGQALVIAALPWVGYYLIWAIYLLVM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26153; Mature: 26022
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPSSNPFVMMLDIFRSPTSCFLALYQRGAWGWQPYIVLILTPFLFWGAYFSNVDFQWLS CCCCCCCEEEEHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH QILTPQFQQINPEQLKFLDDPNTLMASEIISDVFGRTLTILMLAFWFTLATKPSQHQHGF HHHCCHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH WKWFAAAAVITFPAVLGDFASYASLILKHGQVVIYAADLNSLNGLIKLPLTNEWSQFASS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCHHHHHCC MPLLLPWYIVLGYAAVLTWTEFERGQALVIAALPWVGYYLIWAIYLLVM CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TPSSNPFVMMLDIFRSPTSCFLALYQRGAWGWQPYIVLILTPFLFWGAYFSNVDFQWLS CCCCCCEEEEHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH QILTPQFQQINPEQLKFLDDPNTLMASEIISDVFGRTLTILMLAFWFTLATKPSQHQHGF HHHCCHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH WKWFAAAAVITFPAVLGDFASYASLILKHGQVVIYAADLNSLNGLIKLPLTNEWSQFASS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEECCCCCCHHHHHCC MPLLLPWYIVLGYAAVLTWTEFERGQALVIAALPWVGYYLIWAIYLLVM CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA