Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680627
Identifier: 37680627
GI number: 37680627
Start: 2478013
End: 2478744
Strand: Direct
Name: 37680627
Synonym: VV2443
Alternate gene names: NA
Gene position: 2478013-2478744 (Clockwise)
Preceding gene: 37680626
Following gene: 37680628
Centisome position: 73.87
GC content: 45.36
Gene sequence:
>732_bases ATGGATGATTTAGAATTTCGTCGCCGTATTTTGTCGGACCCGAAAAGCCGTGACGAAGAAGTTTTGCAAGCGCTCAACAG CAGCGATTCCAATGCAAAATTTGCTGAAGATGTGCTGGATTTGGATGCGCAAATCAAACAAGCAATGAAAGTGGATGTGC CTGAAGAGCTTGTTGACAAAATCTTGTTTAAACAAACGTCTTACGCAAGTGATGATAAAATTGTCAGACCGAATTTCGTC CGTAAAGCAATGGCGCTAGCCGCTTCATTTGCCTTCACGGCAGGTCTATTGGTCGGTCAAATTAACTGGGGTAACCTCAT TGTGCCACCTGCGCAAGCAAGCTTGGCAGATACGGCAATGAAACACGTGGTCGCAGAAAGTGGCTTTGTGCGACACATCG ATGAGCAAGTGACCTCCGTGCAGATCAACGCCAAATTATCGCCACTGGAGTATTACTTTGATGCAAACTTCCCATACCAC GTTTATTACCTGAATCACTGTGGTTTTGGCCATGCCAATGCATTGCATATGATTTTCCAGGGAGATAAAGGCAAGATCAC GCTGTTTATCGCCCCAATTAAGAGCCCAGCAGAAGCGGATTTCGCCAAAGACGGGATGAATGGCATTATCGTTCCTATTG GTGATACCAGCTTGATCTTGGTGGGAGAAAATGGCGAAGACACCAAGAAATTTGCTGAAAAACTCGCACCTATGATTAAA CCTCTCGTTTAG
Upstream 100 bases:
>100_bases CTTGATCTCAATAAAAATACGGTAATGACACGTCTGTTTCGCGCAAGAAATCAGTTGAAAGAGCTGTTAGACTCAGACCA AACTCAAAGGGGGCAAAAAA
Downstream 100 bases:
>100_bases TCAGCATTTCGCCGACAAAAGCCGCAAGTTACTGCTAACTTGCGGCTTTTTACATTATTAATCCTCACAGAACCATTCAC CAAACTCATATCGGTAGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MDDLEFRRRILSDPKSRDEEVLQALNSSDSNAKFAEDVLDLDAQIKQAMKVDVPEELVDKILFKQTSYASDDKIVRPNFV RKAMALAASFAFTAGLLVGQINWGNLIVPPAQASLADTAMKHVVAESGFVRHIDEQVTSVQINAKLSPLEYYFDANFPYH VYYLNHCGFGHANALHMIFQGDKGKITLFIAPIKSPAEADFAKDGMNGIIVPIGDTSLILVGENGEDTKKFAEKLAPMIK PLV
Sequences:
>Translated_243_residues MDDLEFRRRILSDPKSRDEEVLQALNSSDSNAKFAEDVLDLDAQIKQAMKVDVPEELVDKILFKQTSYASDDKIVRPNFV RKAMALAASFAFTAGLLVGQINWGNLIVPPAQASLADTAMKHVVAESGFVRHIDEQVTSVQINAKLSPLEYYFDANFPYH VYYLNHCGFGHANALHMIFQGDKGKITLFIAPIKSPAEADFAKDGMNGIIVPIGDTSLILVGENGEDTKKFAEKLAPMIK PLV >Mature_243_residues MDDLEFRRRILSDPKSRDEEVLQALNSSDSNAKFAEDVLDLDAQIKQAMKVDVPEELVDKILFKQTSYASDDKIVRPNFV RKAMALAASFAFTAGLLVGQINWGNLIVPPAQASLADTAMKHVVAESGFVRHIDEQVTSVQINAKLSPLEYYFDANFPYH VYYLNHCGFGHANALHMIFQGDKGKITLFIAPIKSPAEADFAKDGMNGIIVPIGDTSLILVGENGEDTKKFAEKLAPMIK PLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26828; Mature: 26828
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDLEFRRRILSDPKSRDEEVLQALNSSDSNAKFAEDVLDLDAQIKQAMKVDVPEELVDK CCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH ILFKQTSYASDDKIVRPNFVRKAMALAASFAFTAGLLVGQINWGNLIVPPAQASLADTAM HHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCHHHHHHHHH KHVVAESGFVRHIDEQVTSVQINAKLSPLEYYFDANFPYHVYYLNHCGFGHANALHMIFQ HHHHHHCCHHHHHHHHHHEEEEECEECCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEE GDKGKITLFIAPIKSPAEADFAKDGMNGIIVPIGDTSLILVGENGEDTKKFAEKLAPMIK CCCCEEEEEEEECCCCCCCHHHHCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHH PLV CCC >Mature Secondary Structure MDDLEFRRRILSDPKSRDEEVLQALNSSDSNAKFAEDVLDLDAQIKQAMKVDVPEELVDK CCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH ILFKQTSYASDDKIVRPNFVRKAMALAASFAFTAGLLVGQINWGNLIVPPAQASLADTAM HHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCHHHHHHHHH KHVVAESGFVRHIDEQVTSVQINAKLSPLEYYFDANFPYHVYYLNHCGFGHANALHMIFQ HHHHHHCCHHHHHHHHHHEEEEECEECCEEEEEECCCCEEEEEEECCCCCCCCEEEEEEE GDKGKITLFIAPIKSPAEADFAKDGMNGIIVPIGDTSLILVGENGEDTKKFAEKLAPMIK CCCCEEEEEEEECCCCCCCHHHHCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHH PLV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA