Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is yicG [C]
Identifier: 37680617
GI number: 37680617
Start: 2465939
End: 2466583
Strand: Direct
Name: yicG [C]
Synonym: VV2433
Alternate gene names: 37680617
Gene position: 2465939-2466583 (Clockwise)
Preceding gene: 37680614
Following gene: 37680620
Centisome position: 73.51
GC content: 48.68
Gene sequence:
>645_bases GTGTTACTAGAGCGTTTCAACATGTTGTTAAGTGTTTTGTATGTCATTGGCATCACGGCAGAAGCCATGACAGGTGCGCT AAGCGCCGGACGCAGAAAAATGGATTGGTTTGGTGTAATGTTGGTGGCCAGTGCAACAGCCATTGGCGGTGGTACGGTAC GAGACATCCTACTAGGACACTACCCACTTGGTTGGGTAAAAAATCCAGAGTTTCTTGCTATCACTTGTGTGGCGGGCATC TTAACAACGGGGCTTGCCAAGTGGGTGATCAAACTCAAAGGCTTGTTTATCCGCCTTGATGCCCTCGGCCTCATCGTATT TAGCATTATTGGTACTAAAATTGCGCTGCAGATGGGCTTGCATCCGGGCATTTGTATGGTTTCAGCTCTAGTGACTGGTG TTTTTGGTGGTTTACTGCGCGACCTCATCTGTCGTCAAACACCATTGGTATTGCATGAAGAGCTTTACGCATCCATTGCG CTTTTGGCATCGGGTCTTTACCTGACATTGTTGGCATTTGAAATCCCAGACGTCACGGCCACTATCGTCACACTCGTGGT AGGTTATGTGCTGCGCATGGCGGCAGTCCGATTTAAATGGCGCTTACCGTCATTCCACTTGGACTCTGAAGAAGCCGTGC ATTAA
Upstream 100 bases:
>100_bases GTGCTTTCCCCTACTATTTCTCATTCGTCAACCCAATCATTTGTGACTAAACTCACGCCTTATTTGTTATTCCACCCTTT GTATATATGACGCAAAGGAA
Downstream 100 bases:
>100_bases GACACGAAATCTCATATTAACCCATATAAAAAGGGTGGCCCTGATGGCCACCCTTTTTGTTTATATTTCAATAACTTTAA ACTAGAGAACTAGATTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MLLERFNMLLSVLYVIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKNPEFLAITCVAGI LTTGLAKWVIKLKGLFIRLDALGLIVFSIIGTKIALQMGLHPGICMVSALVTGVFGGLLRDLICRQTPLVLHEELYASIA LLASGLYLTLLAFEIPDVTATIVTLVVGYVLRMAAVRFKWRLPSFHLDSEEAVH
Sequences:
>Translated_214_residues MLLERFNMLLSVLYVIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKNPEFLAITCVAGI LTTGLAKWVIKLKGLFIRLDALGLIVFSIIGTKIALQMGLHPGICMVSALVTGVFGGLLRDLICRQTPLVLHEELYASIA LLASGLYLTLLAFEIPDVTATIVTLVVGYVLRMAAVRFKWRLPSFHLDSEEAVH >Mature_214_residues MLLERFNMLLSVLYVIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGHYPLGWVKNPEFLAITCVAGI LTTGLAKWVIKLKGLFIRLDALGLIVFSIIGTKIALQMGLHPGICMVSALVTGVFGGLLRDLICRQTPLVLHEELYASIA LLASGLYLTLLAFEIPDVTATIVTLVVGYVLRMAAVRFKWRLPSFHLDSEEAVH
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=203, Percent_Identity=54.679802955665, Blast_Score=209, Evalue=1e-55, Organism=Escherichia coli, GI1786352, Length=205, Percent_Identity=37.5609756097561, Blast_Score=118, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 23181; Mature: 23181
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLERFNMLLSVLYVIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHC YPLGWVKNPEFLAITCVAGILTTGLAKWVIKLKGLFIRLDALGLIVFSIIGTKIALQMGL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HPGICMVSALVTGVFGGLLRDLICRQTPLVLHEELYASIALLASGLYLTLLAFEIPDVTA CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH TIVTLVVGYVLRMAAVRFKWRLPSFHLDSEEAVH HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MLLERFNMLLSVLYVIGITAEAMTGALSAGRRKMDWFGVMLVASATAIGGGTVRDILLGH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHC YPLGWVKNPEFLAITCVAGILTTGLAKWVIKLKGLFIRLDALGLIVFSIIGTKIALQMGL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HPGICMVSALVTGVFGGLLRDLICRQTPLVLHEELYASIALLASGLYLTLLAFEIPDVTA CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH TIVTLVVGYVLRMAAVRFKWRLPSFHLDSEEAVH HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]