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The map label for this gene is yfbU [C]

Identifier: 37680531

GI number: 37680531

Start: 2375981

End: 2376481

Strand: Direct

Name: yfbU [C]

Synonym: VV2347

Alternate gene names: 37680531

Gene position: 2375981-2376481 (Clockwise)

Preceding gene: 37680530

Following gene: 37680532

Centisome position: 70.83

GC content: 45.91

Gene sequence:

>501_bases
ATGGAAATGTCGAATGCACAACGATTGATCCTATCCAACCAGTACAAGTTGATGTCTCAGCTCGACCCTGAAAATGCCGA
AAAATATCAACGTTTTCAGACCATCGTTGAGCGTGGCTATGAGCTGCAAATGCGTGAGTTGAACAAAGATTACGGCTGCA
TCACTGAAGCACTTTGTAAAGAAATTATCGATGTGATGGAAATGTACCATGCAATGCAAGAGTCTTTCCGCATGCTCGAT
GCGGATGAATCTACCCAGGTTGATCAGCGTCGCCTTCAGTTCCTCGGTTTTGATATTGCCTCTGAAGCACAATTGGTTCA
CTACGTTCGATTCTTAACCGAATCTGAAGGTCTCTACCCTCAATTTGACAAAGGCGACCACCACTTCAACAGCCAAATGC
CGATGCTGGAAAAATACCGCCGCATGTTGGCGACTTGGCGCAAGTGCCCTCGTCAATACCACTTATGTGCGACTGAACTG
CGCCAAATTTTTAATGCCTAG

Upstream 100 bases:

>100_bases
ATTTTTCCCATTAAAACTGTGTTGAGATCATGTTTCATCGTGTGATGTTCCGCTAACCTAACGTCAACAACACAATTAGA
GAATATATAGTGAGGTCACC

Downstream 100 bases:

>100_bases
TTTTAGAGCTTAGCGTTTAACGCTTCGCGGACAAACAGATTGATTTCAAATAGAAAGGTTGACCAGCGTCAGCCTTTTTT
GCGTATTCAAGACAAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MEMSNAQRLILSNQYKLMSQLDPENAEKYQRFQTIVERGYELQMRELNKDYGCITEALCKEIIDVMEMYHAMQESFRMLD
ADESTQVDQRRLQFLGFDIASEAQLVHYVRFLTESEGLYPQFDKGDHHFNSQMPMLEKYRRMLATWRKCPRQYHLCATEL
RQIFNA

Sequences:

>Translated_166_residues
MEMSNAQRLILSNQYKLMSQLDPENAEKYQRFQTIVERGYELQMRELNKDYGCITEALCKEIIDVMEMYHAMQESFRMLD
ADESTQVDQRRLQFLGFDIASEAQLVHYVRFLTESEGLYPQFDKGDHHFNSQMPMLEKYRRMLATWRKCPRQYHLCATEL
RQIFNA
>Mature_166_residues
MEMSNAQRLILSNQYKLMSQLDPENAEKYQRFQTIVERGYELQMRELNKDYGCITEALCKEIIDVMEMYHAMQESFRMLD
ADESTQVDQRRLQFLGFDIASEAQLVHYVRFLTESEGLYPQFDKGDHHFNSQMPMLEKYRRMLATWRKCPRQYHLCATEL
RQIFNA

Specific function: Unknown

COG id: COG3013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0304 family

Homologues:

Organism=Escherichia coli, GI87082081, Length=166, Percent_Identity=59.6385542168675, Blast_Score=215, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2093_VIBVU (Q8DAU5)

Other databases:

- EMBL:   AE016795
- RefSeq:   NP_760954.1
- ProteinModelPortal:   Q8DAU5
- SMR:   Q8DAU5
- GeneID:   1178981
- GenomeReviews:   AE016795_GR
- KEGG:   vvu:VV1_2093
- HOGENOM:   HBG297202
- OMA:   ADHHFNS
- ProtClustDB:   PRK05445
- BioCyc:   VVUL216895:VV1_2093-MONOMER
- HAMAP:   MF_00762
- InterPro:   IPR005587
- InterPro:   IPR023146
- InterPro:   IPR023145
- Gene3D:   G3DSA:1.10.3190.10
- Gene3D:   G3DSA:1.10.287.680
- PIRSF:   PIRSF006272
- ProDom:   PD035118

Pfam domain/function: PF03887 YfbU

EC number: NA

Molecular weight: Translated: 19927; Mature: 19927

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMSNAQRLILSNQYKLMSQLDPENAEKYQRFQTIVERGYELQMRELNKDYGCITEALCK
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHH
EIIDVMEMYHAMQESFRMLDADESTQVDQRRLQFLGFDIASEAQLVHYVRFLTESEGLYP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
QFDKGDHHFNSQMPMLEKYRRMLATWRKCPRQYHLCATELRQIFNA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEMSNAQRLILSNQYKLMSQLDPENAEKYQRFQTIVERGYELQMRELNKDYGCITEALCK
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHH
EIIDVMEMYHAMQESFRMLDADESTQVDQRRLQFLGFDIASEAQLVHYVRFLTESEGLYP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
QFDKGDHHFNSQMPMLEKYRRMLATWRKCPRQYHLCATELRQIFNA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA