Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680530
Identifier: 37680530
GI number: 37680530
Start: 2375156
End: 2375854
Strand: Direct
Name: 37680530
Synonym: VV2346
Alternate gene names: NA
Gene position: 2375156-2375854 (Clockwise)
Preceding gene: 37680529
Following gene: 37680531
Centisome position: 70.8
GC content: 44.21
Gene sequence:
>699_bases GTGGGTATTGTTTTATCTACAGGTATGAATGACATGGATGTATTTGCCTTTCTTTGCTTAGGCGTTATCTTGCTGGTGAT TGGGTTTGGTTGCAAAGATGACTTCCTCAAAACCTTTCTCCCGAAGCTAGTGGCAGACAAGCCTTTCCAACACATGACGT TTGCAGTGATGTTGCTGCTATTTTTGCTTTGGAATGCTCAAGCAGGAGTCAAAGAAGGGTTATACATCCATTTTCTTGCA CTGACCACGCTCACCATGATGTTCGGCTGGAGAATGGCATTTTTGCTCACTCTTCCTGTCTACGCGTTACTCATCGCATT TGGTGATCTAACGATACAGCAGTTGCCAAGTACGATTCTCCTCTCTTCCCTCACCCCAATTCTGTTTTCTTACGCGGTTT TCGTACTCAGCTATCACTATTTGCCGAGAAACATCTTTGTGTTTATTTTTATTGCTGGTTTTTTCAACGCAGGGCTGACT GGCAGCGTTCACCTTCTCATTAATGCCCTTTATCATCTCTATGTTGGCCATTACGACTGGCAAACCATATGGCACAACTA TTTCATTTTTATGCCTCTGCTCGCCTTTCCTGAAGCGCTACTCAATGGGATGTCTTTGGCCGTGCTCTGCGTCTTTAAAC CAGAGTGGCTACGCGTCTTTTCAGACCGTGATTACATTTACAACCACTACCGAAAATAG
Upstream 100 bases:
>100_bases CACCAAAAGAGACGATGGATAATATTGTTTCTATCCTTTCGCAATACCATAGCAATGTGAAATACTAAGCACCGTATTCG TTATTCAATACCCACTTTAA
Downstream 100 bases:
>100_bases TGCTCAGATCAACAAACAAATTTTCCATTTTTCCCATTAAAACTGTGTTGAGATCATGTTTCATCGTGTGATGTTCCGCT AACCTAACGTCAACAACACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MGIVLSTGMNDMDVFAFLCLGVILLVIGFGCKDDFLKTFLPKLVADKPFQHMTFAVMLLLFLLWNAQAGVKEGLYIHFLA LTTLTMMFGWRMAFLLTLPVYALLIAFGDLTIQQLPSTILLSSLTPILFSYAVFVLSYHYLPRNIFVFIFIAGFFNAGLT GSVHLLINALYHLYVGHYDWQTIWHNYFIFMPLLAFPEALLNGMSLAVLCVFKPEWLRVFSDRDYIYNHYRK
Sequences:
>Translated_232_residues MGIVLSTGMNDMDVFAFLCLGVILLVIGFGCKDDFLKTFLPKLVADKPFQHMTFAVMLLLFLLWNAQAGVKEGLYIHFLA LTTLTMMFGWRMAFLLTLPVYALLIAFGDLTIQQLPSTILLSSLTPILFSYAVFVLSYHYLPRNIFVFIFIAGFFNAGLT GSVHLLINALYHLYVGHYDWQTIWHNYFIFMPLLAFPEALLNGMSLAVLCVFKPEWLRVFSDRDYIYNHYRK >Mature_231_residues GIVLSTGMNDMDVFAFLCLGVILLVIGFGCKDDFLKTFLPKLVADKPFQHMTFAVMLLLFLLWNAQAGVKEGLYIHFLAL TTLTMMFGWRMAFLLTLPVYALLIAFGDLTIQQLPSTILLSSLTPILFSYAVFVLSYHYLPRNIFVFIFIAGFFNAGLTG SVHLLINALYHLYVGHYDWQTIWHNYFIFMPLLAFPEALLNGMSLAVLCVFKPEWLRVFSDRDYIYNHYRK
Specific function: Unknown
COG id: COG3235
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26656; Mature: 26525
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIVLSTGMNDMDVFAFLCLGVILLVIGFGCKDDFLKTFLPKLVADKPFQHMTFAVMLLL CCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH FLLWNAQAGVKEGLYIHFLALTTLTMMFGWRMAFLLTLPVYALLIAFGDLTIQQLPSTIL HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSLTPILFSYAVFVLSYHYLPRNIFVFIFIAGFFNAGLTGSVHLLINALYHLYVGHYDW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH QTIWHNYFIFMPLLAFPEALLNGMSLAVLCVFKPEWLRVFSDRDYIYNHYRK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure GIVLSTGMNDMDVFAFLCLGVILLVIGFGCKDDFLKTFLPKLVADKPFQHMTFAVMLLL CEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH FLLWNAQAGVKEGLYIHFLALTTLTMMFGWRMAFLLTLPVYALLIAFGDLTIQQLPSTIL HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSLTPILFSYAVFVLSYHYLPRNIFVFIFIAGFFNAGLTGSVHLLINALYHLYVGHYDW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH QTIWHNYFIFMPLLAFPEALLNGMSLAVLCVFKPEWLRVFSDRDYIYNHYRK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA