Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680527
Identifier: 37680527
GI number: 37680527
Start: 2371210
End: 2372190
Strand: Direct
Name: 37680527
Synonym: VV2343
Alternate gene names: NA
Gene position: 2371210-2372190 (Clockwise)
Preceding gene: 37680526
Following gene: 37680529
Centisome position: 70.69
GC content: 47.6
Gene sequence:
>981_bases ATGAAGTTGTCCAAGTCCCTATTTTTATTGCTGCTCTCACCGATGGCTTTTGCTTCGGTCAAATCAACAACCTCGTTCAG TCTCGATAACGATGGTATTTTTGGCGTAGACCAAGATTACACCAACGGTATTTTCTTTGCTTACGCCTCACCAGCTCTAA GTTCAGAACACCAAGTCAAACGTTTGAGTTTGGCGGATAAACAAGGTGGGTCTATTGATAAGTGGGAGTTTTCCATTGGC CACAAAATGTGGACCCCTTCTGATATTTCTCAGACAACCCCCACTCCAAATGATCGCCCCTATGCGGGCTACTTTCACGC AGAGCTCAACTACCTTTCTCTCCATCCACAACAAGCCGTGCGTTACAACCTAACGTTAGGCACCACTGGCGAAAATGCGC TATCCGAAAAAGCGCAAAAGCTGGTACATAGCATTACAGGCTCCACGGATCCAAATGGTTGGGAGTATCAAGTGGATGAT TATTTTGCTGGTAGTGTTGGTTATCAACGCCATGACCTGCTGATGCGCTCTGCAAATCTCGCGGAGTCGAATTGGGAAAT GAGTCATATTTTCGAGGCCAACGCAGGTAATTTCCGCACTGATGTCGCGTCTGGCGTGATGTTTCGCTACGGTTCAGATT TAGCCAACACACTTGGTGCAGCGAGCATTTCAACCGAGAATCCTTTTCACGCGAGCATGATGGGGAATTCCCCATACGGT TGGTTTGTCTATACGGGGCTTTCTACTCGTTATCGTTTTAATGACCTCACATTAGAAGGTGAGCGCTCCGGATTGCCAGA GCCATCCGACCAATATGATGTGACCATGCAACATTGGCAGAGTACTGCTGTAGCGGGTGTGGCATTGTATAACCGTCGTG TTGGCTTGAGTTTCGCGCTGTCAGCTAAGACCCCTGAATACAAAGAAGCACCAGAACGAATCTACGGCAATGGTGCACTC TCTCTCTACGCCTTTTTCTAA
Upstream 100 bases:
>100_bases CGAGTCATGGTCAAATCATTATTCCAACTATAATTGACGATATATTTTCGCTCAGAGAGACGCTTTTGCTGTATGATGTC GCCAAAAACACGGATTTAGT
Downstream 100 bases:
>100_bases CGACAGATTTTTCAACGCCAAAAGTTCGACTTAAAAAAGCGGGATCATTGAGTTATCCCGCTTTTGCTTTTCAAGGTCAG ATCAAATCGTGAATTTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKLSKSLFLLLLSPMAFASVKSTTSFSLDNDGIFGVDQDYTNGIFFAYASPALSSEHQVKRLSLADKQGGSIDKWEFSIG HKMWTPSDISQTTPTPNDRPYAGYFHAELNYLSLHPQQAVRYNLTLGTTGENALSEKAQKLVHSITGSTDPNGWEYQVDD YFAGSVGYQRHDLLMRSANLAESNWEMSHIFEANAGNFRTDVASGVMFRYGSDLANTLGAASISTENPFHASMMGNSPYG WFVYTGLSTRYRFNDLTLEGERSGLPEPSDQYDVTMQHWQSTAVAGVALYNRRVGLSFALSAKTPEYKEAPERIYGNGAL SLYAFF
Sequences:
>Translated_326_residues MKLSKSLFLLLLSPMAFASVKSTTSFSLDNDGIFGVDQDYTNGIFFAYASPALSSEHQVKRLSLADKQGGSIDKWEFSIG HKMWTPSDISQTTPTPNDRPYAGYFHAELNYLSLHPQQAVRYNLTLGTTGENALSEKAQKLVHSITGSTDPNGWEYQVDD YFAGSVGYQRHDLLMRSANLAESNWEMSHIFEANAGNFRTDVASGVMFRYGSDLANTLGAASISTENPFHASMMGNSPYG WFVYTGLSTRYRFNDLTLEGERSGLPEPSDQYDVTMQHWQSTAVAGVALYNRRVGLSFALSAKTPEYKEAPERIYGNGAL SLYAFF >Mature_326_residues MKLSKSLFLLLLSPMAFASVKSTTSFSLDNDGIFGVDQDYTNGIFFAYASPALSSEHQVKRLSLADKQGGSIDKWEFSIG HKMWTPSDISQTTPTPNDRPYAGYFHAELNYLSLHPQQAVRYNLTLGTTGENALSEKAQKLVHSITGSTDPNGWEYQVDD YFAGSVGYQRHDLLMRSANLAESNWEMSHIFEANAGNFRTDVASGVMFRYGSDLANTLGAASISTENPFHASMMGNSPYG WFVYTGLSTRYRFNDLTLEGERSGLPEPSDQYDVTMQHWQSTAVAGVALYNRRVGLSFALSAKTPEYKEAPERIYGNGAL SLYAFF
Specific function: Unknown
COG id: COG3528
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36153; Mature: 36153
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSKSLFLLLLSPMAFASVKSTTSFSLDNDGIFGVDQDYTNGIFFAYASPALSSEHQVK CCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCCCEEEEEECCCCCCCHHHH RLSLADKQGGSIDKWEFSIGHKMWTPSDISQTTPTPNDRPYAGYFHAELNYLSLHPQQAV HHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEE RYNLTLGTTGENALSEKAQKLVHSITGSTDPNGWEYQVDDYFAGSVGYQRHDLLMRSANL EEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCHHHHHHHHHCCC AESNWEMSHIFEANAGNFRTDVASGVMFRYGSDLANTLGAASISTENPFHASMMGNSPYG CCCCCCEEEEEECCCCCCCHHHHHCHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCCC WFVYTGLSTRYRFNDLTLEGERSGLPEPSDQYDVTMQHWQSTAVAGVALYNRRVGLSFAL EEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCEEEEE SAKTPEYKEAPERIYGNGALSLYAFF ECCCCCHHHCCHHHHCCCEEEEEEEC >Mature Secondary Structure MKLSKSLFLLLLSPMAFASVKSTTSFSLDNDGIFGVDQDYTNGIFFAYASPALSSEHQVK CCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCCCEEEEEECCCCCCCHHHH RLSLADKQGGSIDKWEFSIGHKMWTPSDISQTTPTPNDRPYAGYFHAELNYLSLHPQQAV HHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCEE RYNLTLGTTGENALSEKAQKLVHSITGSTDPNGWEYQVDDYFAGSVGYQRHDLLMRSANL EEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCCHHHHHHHHHCCC AESNWEMSHIFEANAGNFRTDVASGVMFRYGSDLANTLGAASISTENPFHASMMGNSPYG CCCCCCEEEEEECCCCCCCHHHHHCHHHHCCCHHHHHHCCCCCCCCCCEEEEECCCCCCC WFVYTGLSTRYRFNDLTLEGERSGLPEPSDQYDVTMQHWQSTAVAGVALYNRRVGLSFAL EEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCEEEEE SAKTPEYKEAPERIYGNGALSLYAFF ECCCCCHHHCCHHHHCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA