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The map label for this gene is torD

Identifier: 37680488

GI number: 37680488

Start: 2325747

End: 2326394

Strand: Direct

Name: torD

Synonym: VV2304

Alternate gene names: 37680488

Gene position: 2325747-2326394 (Clockwise)

Preceding gene: 37680486

Following gene: 37680489

Centisome position: 69.33

GC content: 41.82

Gene sequence:

>648_bases
ATGATGCAAGAGATAAAAGCCTTTAATGAAAAACGTGCGGAAATATATTGGTGGCTTTCGAGCTTATTTGCCAAAGAGCT
GACACAGGAAGAGCTCGATAAATATCAAAGCATGGAAATTAGAGCGTTTTTAACTGGATTGGCTGAAAACGATGCACTGA
GACCATCCGTTAACGCCTTTGTCGATGCACTCAATCGTCTTGTTGACCGTCAAGATGCGCAATTGGAATTAGCGGCAGAT
TTTTGTGACCTATTTTTGAAAACCGCAAAACACGGCGCACTTCCATACGCATCTATTTATCTAACAAAAGATGGCCTACT
CAATGGCGAACCAGCACAAAAAATGGACGCTTGGTTGAAAAAACATGGTGTGCAGGTCAATCAACAACTGAATGAACCGG
CCGATCACTTGGCCATCATGCTCGACTTTCTTGGCAACCTTATCATTCGCTCAAATGAGCTTGAACAAGATCGCCACATG
GAAGAAGCCTTCATTGAGCAAAACGCATTTATTCAAGAAATGTTGCTCTCTTGGTTACCTAGCTTCTCTCAACGAGCAGC
AGAATATGATGAGTTTGGCTTCTATAACAGTGCAATAAAACTACTTGTTGCGTTTTGTATGCTGGACAGCGACTATTTAG
TTGGATAA

Upstream 100 bases:

>100_bases
TTAACAAGCTCAAATATATTTATATTTTTCTTAACAATAGGCGTTATTGTTATTCATTTTTTTTGGTTACACTTATAGGA
GATTGATTTAGGAGCGATAA

Downstream 100 bases:

>100_bases
TAATTACGCCCTTATCAATAGAGCAAACACTCGGTTACACTTTAACCACTAAAGTGTGAACGCGGATACACTATTCGCCG
CTTGAGTAGGTTGCCACTCT

Product: chaperone protein TorD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MMQEIKAFNEKRAEIYWWLSSLFAKELTQEELDKYQSMEIRAFLTGLAENDALRPSVNAFVDALNRLVDRQDAQLELAAD
FCDLFLKTAKHGALPYASIYLTKDGLLNGEPAQKMDAWLKKHGVQVNQQLNEPADHLAIMLDFLGNLIIRSNELEQDRHM
EEAFIEQNAFIQEMLLSWLPSFSQRAAEYDEFGFYNSAIKLLVAFCMLDSDYLVG

Sequences:

>Translated_215_residues
MMQEIKAFNEKRAEIYWWLSSLFAKELTQEELDKYQSMEIRAFLTGLAENDALRPSVNAFVDALNRLVDRQDAQLELAAD
FCDLFLKTAKHGALPYASIYLTKDGLLNGEPAQKMDAWLKKHGVQVNQQLNEPADHLAIMLDFLGNLIIRSNELEQDRHM
EEAFIEQNAFIQEMLLSWLPSFSQRAAEYDEFGFYNSAIKLLVAFCMLDSDYLVG
>Mature_215_residues
MMQEIKAFNEKRAEIYWWLSSLFAKELTQEELDKYQSMEIRAFLTGLAENDALRPSVNAFVDALNRLVDRQDAQLELAAD
FCDLFLKTAKHGALPYASIYLTKDGLLNGEPAQKMDAWLKKHGVQVNQQLNEPADHLAIMLDFLGNLIIRSNELEQDRHM
EEAFIEQNAFIQEMLLSWLPSFSQRAAEYDEFGFYNSAIKLLVAFCMLDSDYLVG

Specific function: Involved in the biogenesis of torA. Acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor [H]

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the torD/dmsD family. TorD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787232, Length=197, Percent_Identity=35.5329949238579, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023069
- InterPro:   IPR020945 [H]

Pfam domain/function: PF02613 Nitrate_red_del [H]

EC number: NA

Molecular weight: Translated: 24726; Mature: 24726

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQEIKAFNEKRAEIYWWLSSLFAKELTQEELDKYQSMEIRAFLTGLAENDALRPSVNAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
VDALNRLVDRQDAQLELAADFCDLFLKTAKHGALPYASIYLTKDGLLNGEPAQKMDAWLK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCHHHHHHHHH
KHGVQVNQQLNEPADHLAIMLDFLGNLIIRSNELEQDRHMEEAFIEQNAFIQEMLLSWLP
HHCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
SFSQRAAEYDEFGFYNSAIKLLVAFCMLDSDYLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMQEIKAFNEKRAEIYWWLSSLFAKELTQEELDKYQSMEIRAFLTGLAENDALRPSVNAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
VDALNRLVDRQDAQLELAADFCDLFLKTAKHGALPYASIYLTKDGLLNGEPAQKMDAWLK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCHHHHHHHHH
KHGVQVNQQLNEPADHLAIMLDFLGNLIIRSNELEQDRHMEEAFIEQNAFIQEMLLSWLP
HHCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
SFSQRAAEYDEFGFYNSAIKLLVAFCMLDSDYLVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA