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The map label for this gene is ycbC [H]

Identifier: 37680486

GI number: 37680486

Start: 2323917

End: 2324717

Strand: Direct

Name: ycbC [H]

Synonym: VV2302

Alternate gene names: 37680486

Gene position: 2323917-2324717 (Clockwise)

Preceding gene: 37680481

Following gene: 37680488

Centisome position: 69.28

GC content: 46.82

Gene sequence:

>801_bases
ATGTTTGAGCTGAAAAAAGTGCTCTCGGCACTGTTAATGCCTTTGCCAGCACTACTTTTGATAGGCTTAGCTGGTCTGAT
GCTGATTATGTTTAGCACCAGACAAAAAACGGGGTGTTTCATCATATTATTCTCCTTTTTGGGGATATTCTTGGTTTCTT
TCCAACCCGTTGCCAGCAAGTTATTAATGCCATTAGAAAGGCAATACTCTGTATTTCTACCCGAAGTACAAACCGTCGAT
TACGTCATGGTATTGGGCAATGGCCATGTGGTGGATGATCAAATCCCCCCTACGTCTGAGTTAAGCCGTGCTTCGTTGAT
GCGTTTGACGGAAGGGATTCGTATTTTAAAGATGTATCCGGGCTCAAAATTGATTCTGTCCGGCTATGCGGGCGGCTCAG
AAACCAGCCATGCGCGCATGATGGCAAACGTGGCCTTGGCTCTGGGTGTCGCGAAATCAGACATTATTCTTCTTGAAGAT
GCCAAAGATACTTGGGAAGAGGCGAGACAAGCAGCGGCATTTGTGCGTCAGAAACAGCTGGTTTTGGTTACTTCTGCCAG
TCACATGGCACGTGCAATGAAAGAGTTTCATGACGCTGGCATAACGCCGTTACCTGCGCCAACAAACTACCTTGCGCAAA
AGAACATCTCTCAAGCTTGGGATAGATATGCCCCTAAAGCCATCTACCTTGAGCAAACTGAGCGCTACTGGTACGAAACC
CTCGGCCAGCTATGGCAAGGCATGCGAGATTTGCTTCTTACTGACGAACAAATCATGGCAGAGAATCGTGCATCAAAATG
A

Upstream 100 bases:

>100_bases
CATATCTAATCGTGCTGCTATTCTGTCATAAGGAAAGCAGATATAAAGAGGCATTCTCTTATTTTTATTATCAAGTGATG
TTTTTTCGGACTATTTCTGT

Downstream 100 bases:

>100_bases
TGAATCATGATCTGCAGAAACAAAAAAAGAGCTTAAACAGCTCTTTTTTTGTTTGTTAATTTTGGCTGTCTAAGCAACGC
CTAGTCGCCTGCAAACATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MFELKKVLSALLMPLPALLLIGLAGLMLIMFSTRQKTGCFIILFSFLGIFLVSFQPVASKLLMPLERQYSVFLPEVQTVD
YVMVLGNGHVVDDQIPPTSELSRASLMRLTEGIRILKMYPGSKLILSGYAGGSETSHARMMANVALALGVAKSDIILLED
AKDTWEEARQAAAFVRQKQLVLVTSASHMARAMKEFHDAGITPLPAPTNYLAQKNISQAWDRYAPKAIYLEQTERYWYET
LGQLWQGMRDLLLTDEQIMAENRASK

Sequences:

>Translated_266_residues
MFELKKVLSALLMPLPALLLIGLAGLMLIMFSTRQKTGCFIILFSFLGIFLVSFQPVASKLLMPLERQYSVFLPEVQTVD
YVMVLGNGHVVDDQIPPTSELSRASLMRLTEGIRILKMYPGSKLILSGYAGGSETSHARMMANVALALGVAKSDIILLED
AKDTWEEARQAAAFVRQKQLVLVTSASHMARAMKEFHDAGITPLPAPTNYLAQKNISQAWDRYAPKAIYLEQTERYWYET
LGQLWQGMRDLLLTDEQIMAENRASK
>Mature_266_residues
MFELKKVLSALLMPLPALLLIGLAGLMLIMFSTRQKTGCFIILFSFLGIFLVSFQPVASKLLMPLERQYSVFLPEVQTVD
YVMVLGNGHVVDDQIPPTSELSRASLMRLTEGIRILKMYPGSKLILSGYAGGSETSHARMMANVALALGVAKSDIILLED
AKDTWEEARQAAAFVRQKQLVLVTSASHMARAMKEFHDAGITPLPAPTNYLAQKNISQAWDRYAPKAIYLEQTERYWYET
LGQLWQGMRDLLLTDEQIMAENRASK

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=250, Percent_Identity=44.8, Blast_Score=173, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 29760; Mature: 29760

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFELKKVLSALLMPLPALLLIGLAGLMLIMFSTRQKTGCFIILFSFLGIFLVSFQPVASK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLMPLERQYSVFLPEVQTVDYVMVLGNGHVVDDQIPPTSELSRASLMRLTEGIRILKMYP
HHHHHHHHHHEECCCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHCCEEEEECC
GSKLILSGYAGGSETSHARMMANVALALGVAKSDIILLEDAKDTWEEARQAAAFVRQKQL
CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHE
VLVTSASHMARAMKEFHDAGITPLPAPTNYLAQKNISQAWDRYAPKAIYLEQTERYWYET
EEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHH
LGQLWQGMRDLLLTDEQIMAENRASK
HHHHHHHHHHHHCCCHHHHHHCCCCC
>Mature Secondary Structure
MFELKKVLSALLMPLPALLLIGLAGLMLIMFSTRQKTGCFIILFSFLGIFLVSFQPVASK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLMPLERQYSVFLPEVQTVDYVMVLGNGHVVDDQIPPTSELSRASLMRLTEGIRILKMYP
HHHHHHHHHHEECCCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHCCEEEEECC
GSKLILSGYAGGSETSHARMMANVALALGVAKSDIILLEDAKDTWEEARQAAAFVRQKQL
CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHE
VLVTSASHMARAMKEFHDAGITPLPAPTNYLAQKNISQAWDRYAPKAIYLEQTERYWYET
EEEECHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHH
LGQLWQGMRDLLLTDEQIMAENRASK
HHHHHHHHHHHHCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]