Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

Click here to switch to the map view.

The map label for this gene is 37680284

Identifier: 37680284

GI number: 37680284

Start: 2106135

End: 2108012

Strand: Direct

Name: 37680284

Synonym: VV2100

Alternate gene names: NA

Gene position: 2106135-2108012 (Clockwise)

Preceding gene: 37680282

Following gene: 37680285

Centisome position: 62.79

GC content: 49.41

Gene sequence:

>1878_bases
ATGGAAGCAGAATTAAGCGACATTCTTCACTTTCTTTCCCTTCACTCGCCCTTCAGCGAACTGCCTCATGAAACATTGGA
GTACGTCGCCCATCACATCGAGATTGGCTACTACCGCAGCCAAACCCCCATCATTAACGCGGGTGACGAGATCCACGAAC
TGTTTCTGGTCAGAAGCGGTGTGGTGGAAGTGTACCGCCGAAATGGCGAACTCTATAACCGTCTCGATGAGGGGGCACTG
TTTGGGCAAATGGGCCTGTTGACCAATAACCGTGTTCGCTTCCCCGTAACGGCAATCAAAGATTGCTTGGTGTACACCAT
TCCTGAAGCGATATTTCAGCAGTTGTATGAACAGCACGATTGCTTCGCTGACTTTGTGGAAGTGGAACAAACCACACGAC
TTCGCCAAGCGGTGAAAGGGGTAAATGAGGCCAATGATCTCACCACCTCCAAAGTGCGCACCCTACTCAATCGGACCGCC
CCCACCATTGATGCCAGCGCGACCATTCAAACCGCAGCGCAAAGAATGGCCGATGAACAAGTCTCTTCGCTTTTGGTGTT
ACAAACAGCCGATGAAGAAAACCGTGATCCTATCGCAGGTATCGTTACCGACCGAGATTTATGCACTCGTGTTGTGGCTC
AAGGAAAATCCCCCAACGAGGCCGTGGCATCGGTTATGACGCCACAGGTGATTCGATTGGATCACAATGCCTACGTCTAT
GAAGCGATGCTCACGATGTTACGCCATAACGTTCATCACTTACCCATTTTGCAAGGCGACCGACTGCTGGGCATTATTGA
AGCCACCGACATTGTCCGTTATGAATCGCAAAACTCTCTGCTGCTCGTTAGCCGGATATTCCAACAGCAAAGTTTTGAAG
GCTTGGCCCAAATCGCTCAAGAGGTCAAAGCCAGTTTCGTGCGTTTGGTCAACGAGGATGCCAACTCACATATGGTCGGC
AGTGCGATGTCGGTGATTGGACGAAGCTTTAAGCAGCGTATTATCGAACTGGCTGAGGAAGAATTGGGGCCTCCCCCCAT
CCGATACTGTTTTTTGGCGCTGGGTTCGATGGGACGGGACGAGCAACTGCTGGTGACCGATCAAGATAACGCGATTATTT
TGGATGACAGCTATCAAGAAAGCGTGCACGGTCAATACTTTGAACAACTGGCTCATATCGTCTGTGATGCGCTCAATGAA
TGCGGCTATCAGTATTGCACTGGTGATATTATGGCTACGAATCCGATCTGGCGTATGACTAAGGCCCAATGGCGAGATTG
CTTTGCCGATTGGATTGACGATCCTAATCCCAAAGCGCTGCTCAACGCATCGATTTTCTTTGACCTTGACGGTGTGTCCG
GCCAAGTCGCATGGGCGGACCAACTGACCGAGTTTGTCGTCAAACGTGCCAAAGGCAATCCACGCTTTTTGGCTTGTTTA
GCAAGAAACGCCTTGAATCGCACACCACCGTTGGGATTTTTCAAAGATTTTGTGATGGAAAAAGACGGTCGACATAACAA
CTCGATCAACTTAAAACGTCGAGGTACCGCACCTTTGGCCGATTTGATTCGTGTGCACGCGCTTGCCGTCGGTTCAACGG
CGAAAAACTCCTTTGAACGTCTTGATGACATTATCGATGCGGGCATATTGCCTAAAGGTCGTGCGCAAAATCTTAAAGAT
GCCTTGGAGTTCATCTCCATGGTACGGATCCGCCATCAAGCTATTGATGTGGCAAATGACAATGAACCCGACAACAACAT
TGAGCCGGAAAATCTGTCCGACTTTGAACGCCGAACGTTAAAAGATGCGTTTCAGATTTTGAGTAACGCGCAGAATTTCC
TGAAGTTTCGTTACCAAGCCTCCAGCCATTTTAAGTAG

Upstream 100 bases:

>100_bases
ATTTGGCTTATTGCATTTAGCTCAAAGCACAATTGCGCTACCATGGAGTGCTTATGCGTACAACGGGTCACCATAGGCTC
AAAACCCAAAAGGTTTGATT

Downstream 100 bases:

>100_bases
CTTATGATCTCTTTACTCAAACCCACCAAGCTTGAATGGCAGCACAAATTCCTGCAAAAGCAGCAGCGAGTTGCCGATGC
GCGCTTGCGCCGATTTTATC

Product: signal-transduction protein

Products: NA

Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; Nucleotidyltransferase Domain Family Protein; DNA Polymerase III Subunit Epsilon; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; Multidomain-Containing Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases

Number of amino acids: Translated: 625; Mature: 625

Protein sequence:

>625_residues
MEAELSDILHFLSLHSPFSELPHETLEYVAHHIEIGYYRSQTPIINAGDEIHELFLVRSGVVEVYRRNGELYNRLDEGAL
FGQMGLLTNNRVRFPVTAIKDCLVYTIPEAIFQQLYEQHDCFADFVEVEQTTRLRQAVKGVNEANDLTTSKVRTLLNRTA
PTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEAVASVMTPQVIRLDHNAYVY
EAMLTMLRHNVHHLPILQGDRLLGIIEATDIVRYESQNSLLLVSRIFQQQSFEGLAQIAQEVKASFVRLVNEDANSHMVG
SAMSVIGRSFKQRIIELAEEELGPPPIRYCFLALGSMGRDEQLLVTDQDNAIILDDSYQESVHGQYFEQLAHIVCDALNE
CGYQYCTGDIMATNPIWRMTKAQWRDCFADWIDDPNPKALLNASIFFDLDGVSGQVAWADQLTEFVVKRAKGNPRFLACL
ARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAVGSTAKNSFERLDDIIDAGILPKGRAQNLKD
ALEFISMVRIRHQAIDVANDNEPDNNIEPENLSDFERRTLKDAFQILSNAQNFLKFRYQASSHFK

Sequences:

>Translated_625_residues
MEAELSDILHFLSLHSPFSELPHETLEYVAHHIEIGYYRSQTPIINAGDEIHELFLVRSGVVEVYRRNGELYNRLDEGAL
FGQMGLLTNNRVRFPVTAIKDCLVYTIPEAIFQQLYEQHDCFADFVEVEQTTRLRQAVKGVNEANDLTTSKVRTLLNRTA
PTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEAVASVMTPQVIRLDHNAYVY
EAMLTMLRHNVHHLPILQGDRLLGIIEATDIVRYESQNSLLLVSRIFQQQSFEGLAQIAQEVKASFVRLVNEDANSHMVG
SAMSVIGRSFKQRIIELAEEELGPPPIRYCFLALGSMGRDEQLLVTDQDNAIILDDSYQESVHGQYFEQLAHIVCDALNE
CGYQYCTGDIMATNPIWRMTKAQWRDCFADWIDDPNPKALLNASIFFDLDGVSGQVAWADQLTEFVVKRAKGNPRFLACL
ARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAVGSTAKNSFERLDDIIDAGILPKGRAQNLKD
ALEFISMVRIRHQAIDVANDNEPDNNIEPENLSDFERRTLKDAFQILSNAQNFLKFRYQASSHFK
>Mature_625_residues
MEAELSDILHFLSLHSPFSELPHETLEYVAHHIEIGYYRSQTPIINAGDEIHELFLVRSGVVEVYRRNGELYNRLDEGAL
FGQMGLLTNNRVRFPVTAIKDCLVYTIPEAIFQQLYEQHDCFADFVEVEQTTRLRQAVKGVNEANDLTTSKVRTLLNRTA
PTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEAVASVMTPQVIRLDHNAYVY
EAMLTMLRHNVHHLPILQGDRLLGIIEATDIVRYESQNSLLLVSRIFQQQSFEGLAQIAQEVKASFVRLVNEDANSHMVG
SAMSVIGRSFKQRIIELAEEELGPPPIRYCFLALGSMGRDEQLLVTDQDNAIILDDSYQESVHGQYFEQLAHIVCDALNE
CGYQYCTGDIMATNPIWRMTKAQWRDCFADWIDDPNPKALLNASIFFDLDGVSGQVAWADQLTEFVVKRAKGNPRFLACL
ARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAVGSTAKNSFERLDDIIDAGILPKGRAQNLKD
ALEFISMVRIRHQAIDVANDNEPDNNIEPENLSDFERRTLKDAFQILSNAQNFLKFRYQASSHFK

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70525; Mature: 70525

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAELSDILHFLSLHSPFSELPHETLEYVAHHIEIGYYRSQTPIINAGDEIHELFLVRSG
CCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCEEECCCCEECCCHHHHHHHHHHHH
VVEVYRRNGELYNRLDEGALFGQMGLLTNNRVRFPVTAIKDCLVYTIPEAIFQQLYEQHD
HHHHHHHCCHHHHHHHCCHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHH
CFADFVEVEQTTRLRQAVKGVNEANDLTTSKVRTLLNRTAPTIDASATIQTAAQRMADEQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEAVASVMTPQVIRLDHNAYVY
HHHEEEEEECCCCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCEEEECCCHHHH
EAMLTMLRHNVHHLPILQGDRLLGIIEATDIVRYESQNSLLLVSRIFQQQSFEGLAQIAQ
HHHHHHHHCCCCCCCEECCCCEEEEEEHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHH
EVKASFVRLVNEDANSHMVGSAMSVIGRSFKQRIIELAEEELGPPPIRYCFLALGSMGRD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
EQLLVTDQDNAIILDDSYQESVHGQYFEQLAHIVCDALNECGYQYCTGDIMATNPIWRMT
CEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEECCCHHHHH
KAQWRDCFADWIDDPNPKALLNASIFFDLDGVSGQVAWADQLTEFVVKRAKGNPRFLACL
HHHHHHHHHHHCCCCCCHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
ARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAVGSTAKNSFER
HHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHH
LDDIIDAGILPKGRAQNLKDALEFISMVRIRHQAIDVANDNEPDNNIEPENLSDFERRTL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
KDAFQILSNAQNFLKFRYQASSHFK
HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEAELSDILHFLSLHSPFSELPHETLEYVAHHIEIGYYRSQTPIINAGDEIHELFLVRSG
CCCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHCEEECCCCEECCCHHHHHHHHHHHH
VVEVYRRNGELYNRLDEGALFGQMGLLTNNRVRFPVTAIKDCLVYTIPEAIFQQLYEQHD
HHHHHHHCCHHHHHHHCCHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHH
CFADFVEVEQTTRLRQAVKGVNEANDLTTSKVRTLLNRTAPTIDASATIQTAAQRMADEQ
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGKSPNEAVASVMTPQVIRLDHNAYVY
HHHEEEEEECCCCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCCEEEECCCHHHH
EAMLTMLRHNVHHLPILQGDRLLGIIEATDIVRYESQNSLLLVSRIFQQQSFEGLAQIAQ
HHHHHHHHCCCCCCCEECCCCEEEEEEHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHH
EVKASFVRLVNEDANSHMVGSAMSVIGRSFKQRIIELAEEELGPPPIRYCFLALGSMGRD
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCC
EQLLVTDQDNAIILDDSYQESVHGQYFEQLAHIVCDALNECGYQYCTGDIMATNPIWRMT
CEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCEEECCCHHHHH
KAQWRDCFADWIDDPNPKALLNASIFFDLDGVSGQVAWADQLTEFVVKRAKGNPRFLACL
HHHHHHHHHHHCCCCCCHHEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHH
ARNALNRTPPLGFFKDFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAVGSTAKNSFER
HHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHH
LDDIIDAGILPKGRAQNLKDALEFISMVRIRHQAIDVANDNEPDNNIEPENLSDFERRTL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
KDAFQILSNAQNFLKFRYQASSHFK
HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA