Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680149
Identifier: 37680149
GI number: 37680149
Start: 1956667
End: 1957443
Strand: Direct
Name: 37680149
Synonym: VV1965
Alternate gene names: NA
Gene position: 1956667-1957443 (Clockwise)
Preceding gene: 37680147
Following gene: 37680153
Centisome position: 58.33
GC content: 45.43
Gene sequence:
>777_bases ATGAGCTTATTTCTTCGTACTACCGCATTGATGCTTTTGGTACTAAGCCGTGCACCTGCGTTTGCAGCCATTCCCACCGC GCCATCGAACCAAGAAAAACAGCGCGAAACAAGCCAAAATGAAGTGTGCTCAAAACTGTTTAAACACAGCTTGAGTGGTT TATACGGCATTCAATCCACTGATACGCAACCACTTCAACCCTACACTGATTTTGACGTGCTTTATAGTAAAGCGCACCAA GCGCAATTTGAGCTCGAAACCATCGTAAAGAGCACCGCACTGTTGACGGATACTCAGCCCTATTTTGCAGGCGTGAAATC ACAACAACGCGCGAAACAGAAAATTGCTTTGGAACTTAATAATCAACCAGAACGCATTACTGACCTCGCTAGAGCAACCA TTGTAGCCGACGACGTAGCAAGCCTTGTTAGTGCCTACGAGGCTTTAGAGCGAGAAACACGCATCGTCAAAGTGAAAAAC CGCTTTAAGAACCCAGGTGAGTCTGGGTATCGTGACCTCAACCTGCTGGTACAACTACCAAAGACCAACTTAGTTGCAGA AGTCCAATTGCACTTGAAAGCCATTGCAGATGTTAAAAGTGGCCCTGAACACGATTTATATCAGCAAATTCAAATGATGG AGAGACAAGCAGCAAGTGAAACGCGTTCACTGAATGATGTCGAGTTGGCGACCATTAAACGACTAAGAAGCCACTCAAAA GATCTTTACCAACAAGCGTGGCAACCTTATTTGACCACACACTTGGAAGCGGCTTAA
Upstream 100 bases:
>100_bases TTGTTTCCTGACAGTGCGCCCCCATAACTTAAGTAACTTGACTGTGTTTTAGACCTTTTGACTCCCCGTTTACTAAAACA ACGCAAGTTAAGGAGAGTGA
Downstream 100 bases:
>100_bases GCGCTTAAGCAAATAAGCAAGTAAGTTAGATACCGCTGAAAAACGAAGACCACGCAATGCGTGGTCTTTCTGTATTCATA GTTCCATTACTATTTCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSLFLRTTALMLLVLSRAPAFAAIPTAPSNQEKQRETSQNEVCSKLFKHSLSGLYGIQSTDTQPLQPYTDFDVLYSKAHQ AQFELETIVKSTALLTDTQPYFAGVKSQQRAKQKIALELNNQPERITDLARATIVADDVASLVSAYEALERETRIVKVKN RFKNPGESGYRDLNLLVQLPKTNLVAEVQLHLKAIADVKSGPEHDLYQQIQMMERQAASETRSLNDVELATIKRLRSHSK DLYQQAWQPYLTTHLEAA
Sequences:
>Translated_258_residues MSLFLRTTALMLLVLSRAPAFAAIPTAPSNQEKQRETSQNEVCSKLFKHSLSGLYGIQSTDTQPLQPYTDFDVLYSKAHQ AQFELETIVKSTALLTDTQPYFAGVKSQQRAKQKIALELNNQPERITDLARATIVADDVASLVSAYEALERETRIVKVKN RFKNPGESGYRDLNLLVQLPKTNLVAEVQLHLKAIADVKSGPEHDLYQQIQMMERQAASETRSLNDVELATIKRLRSHSK DLYQQAWQPYLTTHLEAA >Mature_257_residues SLFLRTTALMLLVLSRAPAFAAIPTAPSNQEKQRETSQNEVCSKLFKHSLSGLYGIQSTDTQPLQPYTDFDVLYSKAHQA QFELETIVKSTALLTDTQPYFAGVKSQQRAKQKIALELNNQPERITDLARATIVADDVASLVSAYEALERETRIVKVKNR FKNPGESGYRDLNLLVQLPKTNLVAEVQLHLKAIADVKSGPEHDLYQQIQMMERQAASETRSLNDVELATIKRLRSHSKD LYQQAWQPYLTTHLEAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29071; Mature: 28940
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFLRTTALMLLVLSRAPAFAAIPTAPSNQEKQRETSQNEVCSKLFKHSLSGLYGIQST CCHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DTQPLQPYTDFDVLYSKAHQAQFELETIVKSTALLTDTQPYFAGVKSQQRAKQKIALELN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHEEC NQPERITDLARATIVADDVASLVSAYEALERETRIVKVKNRFKNPGESGYRDLNLLVQLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECC KTNLVAEVQLHLKAIADVKSGPEHDLYQQIQMMERQAASETRSLNDVELATIKRLRSHSK CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DLYQQAWQPYLTTHLEAA HHHHHHCCHHHHHHCCCC >Mature Secondary Structure SLFLRTTALMLLVLSRAPAFAAIPTAPSNQEKQRETSQNEVCSKLFKHSLSGLYGIQST CHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DTQPLQPYTDFDVLYSKAHQAQFELETIVKSTALLTDTQPYFAGVKSQQRAKQKIALELN CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHEEC NQPERITDLARATIVADDVASLVSAYEALERETRIVKVKNRFKNPGESGYRDLNLLVQLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECC KTNLVAEVQLHLKAIADVKSGPEHDLYQQIQMMERQAASETRSLNDVELATIKRLRSHSK CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH DLYQQAWQPYLTTHLEAA HHHHHHCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA