Definition Vibrio vulnificus YJ016 chromosome I, complete sequence.
Accession NC_005139
Length 3,354,505

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The map label for this gene is ybeQ [C]

Identifier: 37680144

GI number: 37680144

Start: 1951758

End: 1952762

Strand: Direct

Name: ybeQ [C]

Synonym: VV1960

Alternate gene names: 37680144

Gene position: 1951758-1952762 (Clockwise)

Preceding gene: 37680143

Following gene: 37680145

Centisome position: 58.18

GC content: 43.98

Gene sequence:

>1005_bases
TTGCGCAAACCCATTTTGCTTGTTACTTCGCTCATGTTCCTGATGCTTTCTTTTCGCTCTCATGCAGAAAGCACACAGGA
GTTAACAGCAAAAGCCAATCAGCAAGATCCCAAGGCACAATATCAGCTCGCTGTTCAACTCGAACAGCACCAAGATGACA
CGGCTTCTGTCGATGCTTTCTATTGGTACCAACAATCGGCTGAGTTAGGTTATGAGCCTGCGCAGTTTAAACTCGCACAA
GCTTTAGAAAGTGGCATAGGGACGCAAGTCAATATTAAAAGCGCCGCAAATTGGTACCTCCACTCGGCACTCCAAGGTAA
TCAAGTTGCCCTGCTGCGTTTGGGCAATCTGTATGAACAACACGGCAATGAATTTAACAATCTTGACCTTGCTCAACAGT
GGTTTGGTATTGCAGCCCAAACTAATCAGCAAGCTGATCAAGAATACAATCGCATACTTGAACTTAAATTCAACCAGTTG
CGTGCCAAGCAAGTCTCTGCGATATCGCAGCTCGATAGTGCTTTGGCGGAACCCGTTGACGAGCATTCGCTCACATCAAA
CCAAACCAATTTCTCGCAAAAAAACAGTGCTTCTGTAGTCAGTGATTGGATCCCTATTGCTCTATTGCTCAGTGTTATTC
TTGTAGCCGTCTCTTTAGCGCGCACAATACGAAGACGTCGACTCACTCAGCAAATAGACCGCGACTTAACACTAGAAAAG
GAACTGAAAAGTCAGCAGTTCAGTAACAAGCAGTTAAAACGCCAGTTAGAAAAAGTCTTTAACGAGTACAAAAAACTGCA
GAATCAACAAAAAAATCATAAGGTAGCGCTGGCTTGCGCGATGTTTGGTTACCTGCCAAGTAACATTCCTGATGAAAAGT
CGATCAAAATTCGCTTCCGCCAACTATCGAAACTCTACCACCCAGATGCCAGGGGTAGTGAAGAGGAAATGAAGCGCCTA
AACGGGGCATTAAAAGTACTATTACAAAATGTTACAAATAAGTAA

Upstream 100 bases:

>100_bases
TTAAGTAATAACGTAAATATGGCAATTTTGGCTTAGCTGCTGATTTCACATTAGGTTCAGTCTATAATTTGGGCTGAACC
TAACCTCTAGAGATCCCATT

Downstream 100 bases:

>100_bases
CACCACAATTGTTGATATATCAATCAAAACGCGAAACACCCATATAATCTACTCTCGCAATCGATCACGCTCTCAAATTT
TATTTACAGACATTTAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MRKPILLVTSLMFLMLSFRSHAESTQELTAKANQQDPKAQYQLAVQLEQHQDDTASVDAFYWYQQSAELGYEPAQFKLAQ
ALESGIGTQVNIKSAANWYLHSALQGNQVALLRLGNLYEQHGNEFNNLDLAQQWFGIAAQTNQQADQEYNRILELKFNQL
RAKQVSAISQLDSALAEPVDEHSLTSNQTNFSQKNSASVVSDWIPIALLLSVILVAVSLARTIRRRRLTQQIDRDLTLEK
ELKSQQFSNKQLKRQLEKVFNEYKKLQNQQKNHKVALACAMFGYLPSNIPDEKSIKIRFRQLSKLYHPDARGSEEEMKRL
NGALKVLLQNVTNK

Sequences:

>Translated_334_residues
MRKPILLVTSLMFLMLSFRSHAESTQELTAKANQQDPKAQYQLAVQLEQHQDDTASVDAFYWYQQSAELGYEPAQFKLAQ
ALESGIGTQVNIKSAANWYLHSALQGNQVALLRLGNLYEQHGNEFNNLDLAQQWFGIAAQTNQQADQEYNRILELKFNQL
RAKQVSAISQLDSALAEPVDEHSLTSNQTNFSQKNSASVVSDWIPIALLLSVILVAVSLARTIRRRRLTQQIDRDLTLEK
ELKSQQFSNKQLKRQLEKVFNEYKKLQNQQKNHKVALACAMFGYLPSNIPDEKSIKIRFRQLSKLYHPDARGSEEEMKRL
NGALKVLLQNVTNK
>Mature_334_residues
MRKPILLVTSLMFLMLSFRSHAESTQELTAKANQQDPKAQYQLAVQLEQHQDDTASVDAFYWYQQSAELGYEPAQFKLAQ
ALESGIGTQVNIKSAANWYLHSALQGNQVALLRLGNLYEQHGNEFNNLDLAQQWFGIAAQTNQQADQEYNRILELKFNQL
RAKQVSAISQLDSALAEPVDEHSLTSNQTNFSQKNSASVVSDWIPIALLLSVILVAVSLARTIRRRRLTQQIDRDLTLEK
ELKSQQFSNKQLKRQLEKVFNEYKKLQNQQKNHKVALACAMFGYLPSNIPDEKSIKIRFRQLSKLYHPDARGSEEEMKRL
NGALKVLLQNVTNK

Specific function: Unknown

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38147; Mature: 38147

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPILLVTSLMFLMLSFRSHAESTQELTAKANQQDPKAQYQLAVQLEQHQDDTASVDAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHH
YWYQQSAELGYEPAQFKLAQALESGIGTQVNIKSAANWYLHSALQGNQVALLRLGNLYEQ
HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
HGNEFNNLDLAQQWFGIAAQTNQQADQEYNRILELKFNQLRAKQVSAISQLDSALAEPVD
HCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EHSLTSNQTNFSQKNSASVVSDWIPIALLLSVILVAVSLARTIRRRRLTQQIDRDLTLEK
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ELKSQQFSNKQLKRQLEKVFNEYKKLQNQQKNHKVALACAMFGYLPSNIPDEKSIKIRFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
QLSKLYHPDARGSEEEMKRLNGALKVLLQNVTNK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKPILLVTSLMFLMLSFRSHAESTQELTAKANQQDPKAQYQLAVQLEQHQDDTASVDAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHH
YWYQQSAELGYEPAQFKLAQALESGIGTQVNIKSAANWYLHSALQGNQVALLRLGNLYEQ
HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCEEEHHHHHHHHH
HGNEFNNLDLAQQWFGIAAQTNQQADQEYNRILELKFNQLRAKQVSAISQLDSALAEPVD
HCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EHSLTSNQTNFSQKNSASVVSDWIPIALLLSVILVAVSLARTIRRRRLTQQIDRDLTLEK
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
ELKSQQFSNKQLKRQLEKVFNEYKKLQNQQKNHKVALACAMFGYLPSNIPDEKSIKIRFR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
QLSKLYHPDARGSEEEMKRLNGALKVLLQNVTNK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA