Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is ybeQ [C]
Identifier: 37680144
GI number: 37680144
Start: 1951758
End: 1952762
Strand: Direct
Name: ybeQ [C]
Synonym: VV1960
Alternate gene names: 37680144
Gene position: 1951758-1952762 (Clockwise)
Preceding gene: 37680143
Following gene: 37680145
Centisome position: 58.18
GC content: 43.98
Gene sequence:
>1005_bases TTGCGCAAACCCATTTTGCTTGTTACTTCGCTCATGTTCCTGATGCTTTCTTTTCGCTCTCATGCAGAAAGCACACAGGA GTTAACAGCAAAAGCCAATCAGCAAGATCCCAAGGCACAATATCAGCTCGCTGTTCAACTCGAACAGCACCAAGATGACA CGGCTTCTGTCGATGCTTTCTATTGGTACCAACAATCGGCTGAGTTAGGTTATGAGCCTGCGCAGTTTAAACTCGCACAA GCTTTAGAAAGTGGCATAGGGACGCAAGTCAATATTAAAAGCGCCGCAAATTGGTACCTCCACTCGGCACTCCAAGGTAA TCAAGTTGCCCTGCTGCGTTTGGGCAATCTGTATGAACAACACGGCAATGAATTTAACAATCTTGACCTTGCTCAACAGT GGTTTGGTATTGCAGCCCAAACTAATCAGCAAGCTGATCAAGAATACAATCGCATACTTGAACTTAAATTCAACCAGTTG CGTGCCAAGCAAGTCTCTGCGATATCGCAGCTCGATAGTGCTTTGGCGGAACCCGTTGACGAGCATTCGCTCACATCAAA CCAAACCAATTTCTCGCAAAAAAACAGTGCTTCTGTAGTCAGTGATTGGATCCCTATTGCTCTATTGCTCAGTGTTATTC TTGTAGCCGTCTCTTTAGCGCGCACAATACGAAGACGTCGACTCACTCAGCAAATAGACCGCGACTTAACACTAGAAAAG GAACTGAAAAGTCAGCAGTTCAGTAACAAGCAGTTAAAACGCCAGTTAGAAAAAGTCTTTAACGAGTACAAAAAACTGCA GAATCAACAAAAAAATCATAAGGTAGCGCTGGCTTGCGCGATGTTTGGTTACCTGCCAAGTAACATTCCTGATGAAAAGT CGATCAAAATTCGCTTCCGCCAACTATCGAAACTCTACCACCCAGATGCCAGGGGTAGTGAAGAGGAAATGAAGCGCCTA AACGGGGCATTAAAAGTACTATTACAAAATGTTACAAATAAGTAA
Upstream 100 bases:
>100_bases TTAAGTAATAACGTAAATATGGCAATTTTGGCTTAGCTGCTGATTTCACATTAGGTTCAGTCTATAATTTGGGCTGAACC TAACCTCTAGAGATCCCATT
Downstream 100 bases:
>100_bases CACCACAATTGTTGATATATCAATCAAAACGCGAAACACCCATATAATCTACTCTCGCAATCGATCACGCTCTCAAATTT TATTTACAGACATTTAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MRKPILLVTSLMFLMLSFRSHAESTQELTAKANQQDPKAQYQLAVQLEQHQDDTASVDAFYWYQQSAELGYEPAQFKLAQ ALESGIGTQVNIKSAANWYLHSALQGNQVALLRLGNLYEQHGNEFNNLDLAQQWFGIAAQTNQQADQEYNRILELKFNQL RAKQVSAISQLDSALAEPVDEHSLTSNQTNFSQKNSASVVSDWIPIALLLSVILVAVSLARTIRRRRLTQQIDRDLTLEK ELKSQQFSNKQLKRQLEKVFNEYKKLQNQQKNHKVALACAMFGYLPSNIPDEKSIKIRFRQLSKLYHPDARGSEEEMKRL NGALKVLLQNVTNK
Sequences:
>Translated_334_residues MRKPILLVTSLMFLMLSFRSHAESTQELTAKANQQDPKAQYQLAVQLEQHQDDTASVDAFYWYQQSAELGYEPAQFKLAQ ALESGIGTQVNIKSAANWYLHSALQGNQVALLRLGNLYEQHGNEFNNLDLAQQWFGIAAQTNQQADQEYNRILELKFNQL RAKQVSAISQLDSALAEPVDEHSLTSNQTNFSQKNSASVVSDWIPIALLLSVILVAVSLARTIRRRRLTQQIDRDLTLEK ELKSQQFSNKQLKRQLEKVFNEYKKLQNQQKNHKVALACAMFGYLPSNIPDEKSIKIRFRQLSKLYHPDARGSEEEMKRL NGALKVLLQNVTNK >Mature_334_residues MRKPILLVTSLMFLMLSFRSHAESTQELTAKANQQDPKAQYQLAVQLEQHQDDTASVDAFYWYQQSAELGYEPAQFKLAQ ALESGIGTQVNIKSAANWYLHSALQGNQVALLRLGNLYEQHGNEFNNLDLAQQWFGIAAQTNQQADQEYNRILELKFNQL RAKQVSAISQLDSALAEPVDEHSLTSNQTNFSQKNSASVVSDWIPIALLLSVILVAVSLARTIRRRRLTQQIDRDLTLEK ELKSQQFSNKQLKRQLEKVFNEYKKLQNQQKNHKVALACAMFGYLPSNIPDEKSIKIRFRQLSKLYHPDARGSEEEMKRL NGALKVLLQNVTNK
Specific function: Unknown
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38147; Mature: 38147
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKPILLVTSLMFLMLSFRSHAESTQELTAKANQQDPKAQYQLAVQLEQHQDDTASVDAF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHH YWYQQSAELGYEPAQFKLAQALESGIGTQVNIKSAANWYLHSALQGNQVALLRLGNLYEQ HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCEEEHHHHHHHHH HGNEFNNLDLAQQWFGIAAQTNQQADQEYNRILELKFNQLRAKQVSAISQLDSALAEPVD HCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EHSLTSNQTNFSQKNSASVVSDWIPIALLLSVILVAVSLARTIRRRRLTQQIDRDLTLEK HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ELKSQQFSNKQLKRQLEKVFNEYKKLQNQQKNHKVALACAMFGYLPSNIPDEKSIKIRFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHH QLSKLYHPDARGSEEEMKRLNGALKVLLQNVTNK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKPILLVTSLMFLMLSFRSHAESTQELTAKANQQDPKAQYQLAVQLEQHQDDTASVDAF CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHHHH YWYQQSAELGYEPAQFKLAQALESGIGTQVNIKSAANWYLHSALQGNQVALLRLGNLYEQ HHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCEEEHHHHHHHHH HGNEFNNLDLAQQWFGIAAQTNQQADQEYNRILELKFNQLRAKQVSAISQLDSALAEPVD HCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH EHSLTSNQTNFSQKNSASVVSDWIPIALLLSVILVAVSLARTIRRRRLTQQIDRDLTLEK HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ELKSQQFSNKQLKRQLEKVFNEYKKLQNQQKNHKVALACAMFGYLPSNIPDEKSIKIRFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHH QLSKLYHPDARGSEEEMKRLNGALKVLLQNVTNK HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA