Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680142
Identifier: 37680142
GI number: 37680142
Start: 1950211
End: 1950912
Strand: Direct
Name: 37680142
Synonym: VV1958
Alternate gene names: NA
Gene position: 1950211-1950912 (Clockwise)
Preceding gene: 37680141
Following gene: 37680143
Centisome position: 58.14
GC content: 45.87
Gene sequence:
>702_bases TTGCCATTGTCTATGGATAAACAAAAAGCGCTGAAGAAAATTGCCAAATGCCTAGAGCTAGGCAACTCCGCCAATGTCAA CGAAGCGGCCAACGCGATTAAGATGGCGCATCGTTTGATGCTCAAGTATGGCCTCGACAAAGACGATATCGAGTTCATTA AGATGGGAAAAACTCAATCAACCCATCTTCTGCCTGCGAGTATCAGTTCCGTCTTACTGCGTGTTATTCGTGGCATCAAT ACCAAATTTGGTGTAGAAGCAGTGTTGCTTAACCATAAGGGACTCAAACGCTTAGAGTTTATTGGTGAAGCTGACCGTGC TATTTTCGCCGCTTTCGCCTTTGACATTATTTACCGTGAAATGAACGAAAGCACGGGCCAATTCCGCAATAGCTTTGCAG GCTCTGGCACCTCTTCACTTGAGGTGACACGCCGAGTCAACTCGTTTGTCTCTGGTTGGGTAGAGGGCGCATTGGAAAAA CTGCCAGTGATCACGCCTGATGAAGAATCGGCTAACAAAATCAATAACTACATCGATAAAGAGTTCCAAAACATCGATCG TGAAACCTTTAAGCAGCAGTTGCGTGAGGCGATGAAAAATCTCACTGCCGATTACGAAGTGGGCCTGAAAAAAGGGCGCA AAGTGTCGGTTAACCGCCCGGTTGGTGGTGCTCAAGCAATGAAACAAATCGAAAAAAGATAA
Upstream 100 bases:
>100_bases CCACTGTGACACGGCTTTTTTGTCACCGCGCCTCTCGCAAGGATTCAAATTTTGTCGAAAAAAAGGTATGATGTCCGACT TTGCTGATTGAGTTAGGTTT
Downstream 100 bases:
>100_bases CCTTACACTGACATTTCTCTCATTGACTTGCTGAATAATCCGCACGGAGGCAGCAGTTAGCCTCTGAATGTACATGGAGA GATGACTTTGAAAAAAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MPLSMDKQKALKKIAKCLELGNSANVNEAANAIKMAHRLMLKYGLDKDDIEFIKMGKTQSTHLLPASISSVLLRVIRGIN TKFGVEAVLLNHKGLKRLEFIGEADRAIFAAFAFDIIYREMNESTGQFRNSFAGSGTSSLEVTRRVNSFVSGWVEGALEK LPVITPDEESANKINNYIDKEFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKVSVNRPVGGAQAMKQIEKR
Sequences:
>Translated_233_residues MPLSMDKQKALKKIAKCLELGNSANVNEAANAIKMAHRLMLKYGLDKDDIEFIKMGKTQSTHLLPASISSVLLRVIRGIN TKFGVEAVLLNHKGLKRLEFIGEADRAIFAAFAFDIIYREMNESTGQFRNSFAGSGTSSLEVTRRVNSFVSGWVEGALEK LPVITPDEESANKINNYIDKEFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKVSVNRPVGGAQAMKQIEKR >Mature_232_residues PLSMDKQKALKKIAKCLELGNSANVNEAANAIKMAHRLMLKYGLDKDDIEFIKMGKTQSTHLLPASISSVLLRVIRGINT KFGVEAVLLNHKGLKRLEFIGEADRAIFAAFAFDIIYREMNESTGQFRNSFAGSGTSSLEVTRRVNSFVSGWVEGALEKL PVITPDEESANKINNYIDKEFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKVSVNRPVGGAQAMKQIEKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26068; Mature: 25937
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSMDKQKALKKIAKCLELGNSANVNEAANAIKMAHRLMLKYGLDKDDIEFIKMGKTQS CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCC THLLPASISSVLLRVIRGINTKFGVEAVLLNHKGLKRLEFIGEADRAIFAAFAFDIIYRE CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MNESTGQFRNSFAGSGTSSLEVTRRVNSFVSGWVEGALEKLPVITPDEESANKINNYIDK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH EFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKVSVNRPVGGAQAMKQIEKR HHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHCC >Mature Secondary Structure PLSMDKQKALKKIAKCLELGNSANVNEAANAIKMAHRLMLKYGLDKDDIEFIKMGKTQS CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCC THLLPASISSVLLRVIRGINTKFGVEAVLLNHKGLKRLEFIGEADRAIFAAFAFDIIYRE CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MNESTGQFRNSFAGSGTSSLEVTRRVNSFVSGWVEGALEKLPVITPDEESANKINNYIDK HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH EFQNIDRETFKQQLREAMKNLTADYEVGLKKGRKVSVNRPVGGAQAMKQIEKR HHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA