Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
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Accession | NC_005139 |
Length | 3,354,505 |
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The map label for this gene is 37680137
Identifier: 37680137
GI number: 37680137
Start: 1942959
End: 1943684
Strand: Direct
Name: 37680137
Synonym: VV1953
Alternate gene names: NA
Gene position: 1942959-1943684 (Clockwise)
Preceding gene: 37680136
Following gene: 37680141
Centisome position: 57.92
GC content: 47.25
Gene sequence:
>726_bases ATGTTTCTAACACCTTATTTTTCAAGCAATAACCATCAATTTCAGTTCACTCGCGAGCAAGCAAGCCACTTTGCGAAAAA AGTCGCGGGAGACTATAACCCAATCCATGATGAAGACAGCAAGCGCTTCTGCGTACCTGGCGATCTTTTGTTTGCCGTAC TGCTCAGCAAAGAGGGCGTCAGCCAAAAAATGCGTTTCGACTTTTCTGGCATGGTCAACGATGGTGTGGCTCTTCACATT GAAAATAAGTGTGCAAAAGAGAGTGCCGTAGTGGATGCTGCAGGTAAAGAGTACCTGCACATGAGCCGCGAAGGCGACGT GAATCGCGATGCGGCTTTCATTGAGCACGTGGTGACTAACTATGTTCAGTTCTCAGGCATGAACTTCCCACACATCATGG TGCCTCTAATGGAAGAGCAACAGATGATGATCAATTGCCAGCGTCCTCTGGTGATTTACGAAAGCATGGAAGTCGAATTT GAACGTCTGGATCTTTCTCACCCAGAGGTGGCATTTACCGGCGCCACCTTTGATGTCGATGGTAAACGTGGTGTTGTCAC CCTTAACTTCGCGTTTAAAGAAGATGGCGAAGTAGTTGGACGAGGGATTAAACGCATGGTAGCCAGCGGCCTAAAGCCTT ATGACCAAGATGCTGTTGATGACTTGGTTAACCGTTTTAACGAACGTAAAGAAGCCTTCTTGCAGCAGTTTGCGCAAGCA GCATAA
Upstream 100 bases:
>100_bases CAAATCTGTGAGCAAATATTGAACTTTCACACTGGATGGACCATTGAATCTATTCTCATAGCGTATAATCAGCCACAGTT TTGGCTATATCATACGACAT
Downstream 100 bases:
>100_bases GTGACTTAGCCAAGTAAACAAACAATACTAAGAACAAAAGGGAGCTTATTTAAAGCTCCCTTTCTCTTTGATACGAGATG GTCAAAACGTACACATTACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MFLTPYFSSNNHQFQFTREQASHFAKKVAGDYNPIHDEDSKRFCVPGDLLFAVLLSKEGVSQKMRFDFSGMVNDGVALHI ENKCAKESAVVDAAGKEYLHMSREGDVNRDAAFIEHVVTNYVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEF ERLDLSHPEVAFTGATFDVDGKRGVVTLNFAFKEDGEVVGRGIKRMVASGLKPYDQDAVDDLVNRFNERKEAFLQQFAQA A
Sequences:
>Translated_241_residues MFLTPYFSSNNHQFQFTREQASHFAKKVAGDYNPIHDEDSKRFCVPGDLLFAVLLSKEGVSQKMRFDFSGMVNDGVALHI ENKCAKESAVVDAAGKEYLHMSREGDVNRDAAFIEHVVTNYVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEF ERLDLSHPEVAFTGATFDVDGKRGVVTLNFAFKEDGEVVGRGIKRMVASGLKPYDQDAVDDLVNRFNERKEAFLQQFAQA A >Mature_241_residues MFLTPYFSSNNHQFQFTREQASHFAKKVAGDYNPIHDEDSKRFCVPGDLLFAVLLSKEGVSQKMRFDFSGMVNDGVALHI ENKCAKESAVVDAAGKEYLHMSREGDVNRDAAFIEHVVTNYVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEF ERLDLSHPEVAFTGATFDVDGKRGVVTLNFAFKEDGEVVGRGIKRMVASGLKPYDQDAVDDLVNRFNERKEAFLQQFAQA A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27309; Mature: 27309
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLTPYFSSNNHQFQFTREQASHFAKKVAGDYNPIHDEDSKRFCVPGDLLFAVLLSKEGV CEECCEECCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCC SQKMRFDFSGMVNDGVALHIENKCAKESAVVDAAGKEYLHMSREGDVNRDAAFIEHVVTN CHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCHHHEEECCCCCCCHHHHHHHHHHHH YVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEFERLDLSHPEVAFTGATFDVD HHHHCCCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCEEEECCEEEEC GKRGVVTLNFAFKEDGEVVGRGIKRMVASGLKPYDQDAVDDLVNRFNERKEAFLQQFAQA CCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC A C >Mature Secondary Structure MFLTPYFSSNNHQFQFTREQASHFAKKVAGDYNPIHDEDSKRFCVPGDLLFAVLLSKEGV CEECCEECCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCEEECCHHHHHHHHHHCCCC SQKMRFDFSGMVNDGVALHIENKCAKESAVVDAAGKEYLHMSREGDVNRDAAFIEHVVTN CHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHCCHHHEEECCCCCCCHHHHHHHHHHHH YVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEFERLDLSHPEVAFTGATFDVD HHHHCCCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCEEEECCEEEEC GKRGVVTLNFAFKEDGEVVGRGIKRMVASGLKPYDQDAVDDLVNRFNERKEAFLQQFAQA CCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA