Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is lon [H]
Identifier: 37523700
GI number: 37523700
Start: 4327560
End: 4328588
Strand: Reverse
Name: lon [H]
Synonym: gll4131
Alternate gene names: 37523700
Gene position: 4328588-4327560 (Counterclockwise)
Preceding gene: 37523702
Following gene: 37523699
Centisome position: 92.91
GC content: 62.1
Gene sequence:
>1029_bases GTGGCCGTTGCCGCTTTTGGAAGTTTTGCAGCGCAGGCCGCCGATCCTCCTCGAGCATTGCCTTTGGTAGTGTTGCCGGA GGCTGTTCTTTTTCCGGGGCAGCCGCTCACCTTGAGCATCGTCCAGCCCCGCGACCGCAAGATGATGGGCGCGGTACTCA ACGGCGACGGACGGCTGGGGGTCGTGCTTAAAACCAACGACAAACCCGCCGCGATCGGTTGCACGGCCGATATTCTCTAC ATCGAGCAGCTCGGTGGCGGCGGTTTTAATATGCTTACCCAGGGCGGGCGGCGCTTCCGGGTCGGCTCCTATACCCAGCG CGAGCCGTTTTTGCTGGCGGCGGTCGATTGGCTTGCCGAGGGACCGTCCGGCAAAGAGTTGGAGCCGCTGGTTATCGAGA CTAAGCAACTGCTCCAGGACGTGGTGGGCCTCTCGAGCGAAGCGCTCAAGCGCACGGTGGACCTACCCAGACTGCCGAGC GAACCCAGGGAATTTTCTTATTGGATGGCTAGTCGCTTCTACGGCGCTCCGAGGACGCAACAGATGCTTCTGGAGATCCC CGATACGGCGGAGCGGCTGCAAAAAGCCAAAGCAATCCTGCTCAATACCCGCCAGGAATTGATCGCGAGCCTGCAGCGGC AAAGCGGCCGTACCCGTGCCGCCGACACGCCCACCCCCGGCGAAGCCAAAATCGCCCTAGGCGGCAGCGATCCGATCTCC TTTTCGATGCTCATCGGCAGTGACTTCCTGCAGGGGGTTGTGCTCAGCGACCGGCTGTTGCTCACCCGCCGCAAAGGTGG TGCCGCCGAGGTCGGTACGCAGATCCGGCTCACCCCTGCCCAGCAGCAGCAATTTTTCAAGCTCTGGATCGCTTTTGTCA AGGATGTCGAAGCGGGTGCCTACGCCCGGGCGGACAAAAAACCCGCCCAACCGTTGCCTCTCAACGGCTGGCTGAGAGAA GTGATCTTTGCGAGCAGCACCCCGGACCGGGCCGAACTGCTCGCCGCTCTCCAGAAAACCCAACCCTGA
Upstream 100 bases:
>100_bases GAGAAGGACAGATGTGCCGCAATGGCGTACATTGAATCCCAGAGGGGCCAATCGGAGACAACCGGCCATGGGTGTTCGCC GCCGATTTATTCTGGGGGGT
Downstream 100 bases:
>100_bases ATCAGCCTCTTTCTTGGGAGGGACAGCCACAGCCGCACTTCCCACCTGGGGAAGACGAAGCTCGCGCCACCCGAATGGGA TGATATCGGGGTGTGCATTA
Product: ATP-dependent protease
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MAVAAFGSFAAQAADPPRALPLVVLPEAVLFPGQPLTLSIVQPRDRKMMGAVLNGDGRLGVVLKTNDKPAAIGCTADILY IEQLGGGGFNMLTQGGRRFRVGSYTQREPFLLAAVDWLAEGPSGKELEPLVIETKQLLQDVVGLSSEALKRTVDLPRLPS EPREFSYWMASRFYGAPRTQQMLLEIPDTAERLQKAKAILLNTRQELIASLQRQSGRTRAADTPTPGEAKIALGGSDPIS FSMLIGSDFLQGVVLSDRLLLTRRKGGAAEVGTQIRLTPAQQQQFFKLWIAFVKDVEAGAYARADKKPAQPLPLNGWLRE VIFASSTPDRAELLAALQKTQP
Sequences:
>Translated_342_residues MAVAAFGSFAAQAADPPRALPLVVLPEAVLFPGQPLTLSIVQPRDRKMMGAVLNGDGRLGVVLKTNDKPAAIGCTADILY IEQLGGGGFNMLTQGGRRFRVGSYTQREPFLLAAVDWLAEGPSGKELEPLVIETKQLLQDVVGLSSEALKRTVDLPRLPS EPREFSYWMASRFYGAPRTQQMLLEIPDTAERLQKAKAILLNTRQELIASLQRQSGRTRAADTPTPGEAKIALGGSDPIS FSMLIGSDFLQGVVLSDRLLLTRRKGGAAEVGTQIRLTPAQQQQFFKLWIAFVKDVEAGAYARADKKPAQPLPLNGWLRE VIFASSTPDRAELLAALQKTQP >Mature_341_residues AVAAFGSFAAQAADPPRALPLVVLPEAVLFPGQPLTLSIVQPRDRKMMGAVLNGDGRLGVVLKTNDKPAAIGCTADILYI EQLGGGGFNMLTQGGRRFRVGSYTQREPFLLAAVDWLAEGPSGKELEPLVIETKQLLQDVVGLSSEALKRTVDLPRLPSE PREFSYWMASRFYGAPRTQQMLLEIPDTAERLQKAKAILLNTRQELIASLQRQSGRTRAADTPTPGEAKIALGGSDPISF SMLIGSDFLQGVVLSDRLLLTRRKGGAAEVGTQIRLTPAQQQQFFKLWIAFVKDVEAGAYARADKKPAQPLPLNGWLREV IFASSTPDRAELLAALQKTQP
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 37143; Mature: 37012
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAAFGSFAAQAADPPRALPLVVLPEAVLFPGQPLTLSIVQPRDRKMMGAVLNGDGRLG CCEECCCHHHHHCCCCCCCCCEEEECHHHCCCCCCEEEEEECCCCHHHHHEEECCCCEEE VVLKTNDKPAAIGCTADILYIEQLGGGGFNMLTQGGRRFRVGSYTQREPFLLAAVDWLAE EEEECCCCCCEEECCEEEEEEEECCCCCHHHHHCCCCEEEECCCCCCCCEEEEEEHHHHC GPSGKELEPLVIETKQLLQDVVGLSSEALKRTVDLPRLPSEPREFSYWMASRFYGAPRTQ CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCH QMLLEIPDTAERLQKAKAILLNTRQELIASLQRQSGRTRAADTPTPGEAKIALGGSDPIS HHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCE FSMLIGSDFLQGVVLSDRLLLTRRKGGAAEVGTQIRLTPAQQQQFFKLWIAFVKDVEAGA EEEEHHHHHHHHHHHCCEEEEEECCCCCHHCCCEEEECHHHHHHHHHHHHHHHHHHCCCC YARADKKPAQPLPLNGWLREVIFASSTPDRAELLAALQKTQP EECCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure AVAAFGSFAAQAADPPRALPLVVLPEAVLFPGQPLTLSIVQPRDRKMMGAVLNGDGRLG CEECCCHHHHHCCCCCCCCCEEEECHHHCCCCCCEEEEEECCCCHHHHHEEECCCCEEE VVLKTNDKPAAIGCTADILYIEQLGGGGFNMLTQGGRRFRVGSYTQREPFLLAAVDWLAE EEEECCCCCCEEECCEEEEEEEECCCCCHHHHHCCCCEEEECCCCCCCCEEEEEEHHHHC GPSGKELEPLVIETKQLLQDVVGLSSEALKRTVDLPRLPSEPREFSYWMASRFYGAPRTQ CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCH QMLLEIPDTAERLQKAKAILLNTRQELIASLQRQSGRTRAADTPTPGEAKIALGGSDPIS HHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCE FSMLIGSDFLQGVVLSDRLLLTRRKGGAAEVGTQIRLTPAQQQQFFKLWIAFVKDVEAGA EEEEHHHHHHHHHHHCCEEEEEECCCCCHHCCCEEEECHHHHHHHHHHHHHHHHHHCCCC YARADKKPAQPLPLNGWLREVIFASSTPDRAELLAALQKTQP EECCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA