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The map label for this gene is rbn [C]

Identifier: 37523699

GI number: 37523699

Start: 4326322

End: 4327467

Strand: Reverse

Name: rbn [C]

Synonym: gll4130

Alternate gene names: 37523699

Gene position: 4327467-4326322 (Counterclockwise)

Preceding gene: 37523700

Following gene: 37523696

Centisome position: 92.88

GC content: 61.61

Gene sequence:

>1146_bases
GTGCATTACAGTTCCAAACCGATGACCAACCCGCAGCCCGCCCCCTTGCCCCTCTGGCAGAAAGGGCTCGACTTACTCAA
AGAAACCGGCCAGGAGTGGTCGAATGACAAGGTGCCGCGTCTGGCGGCAGCCCTTGCATACTACACATTCTTTTCGCTGG
CACCGCTGTTGGTGGTGGTGATCGCCGTCGCCGGGTTTTTTCTGGGTCCAGATGCGGTGCGCGGTCAGCTCGACAACCAG
ATTGCCGGTCTGGTAGGCCAGCAGAGCGCGTCGGCCATCCAGGAACTGGTCAAAAGCGCCTACCATCCCGCCTCGGGGTT
CACCGCCACCGCCATCGCCCTTGGCGCCATCCTCTTCGGCGTCTCGGGGCTGTTCGGCGAGTTGCAAGACGCCCTCAACA
CTATCTGGGGCGTGGCGCCCAAGCCCGACCGCAGCTGGGTGGAGGTGGTCAAGCAGCGCTTCGTCTCCTTTTCGATGGTC
TTCGGGATCGCTTTTTTGATGTTGGTGTCGCTGGTCGTCAGCGCCGTCGTCAGTGCCGTCACCGGCTACTTCGGCGCCTT
GCTGCCGATGCCCGGCTTCGTGCCGGGATTGGTGGACGTGCTGGTTTCAGTTGCGATCACGACGCTCTTATTCGCGATGA
TTTACAAGGTGCTCCCGGATGTCAAAATTGCCTGGCAGGACGTCGCCATTGGTGCTGCGATGACGGCGATCCTGTTCGTA
CTGGGCAAGTCGCTCATCGGGCTTTACCTGGGCCAGAGCAGCTTCGGCTCCAGCTACGGGGCGGCGGGCTCGCTGGTGGT
CGTGCTGGTGTGGGTCTATTACACAGTCCAAATTCTTTTTTTCGGGGCCGAATTTACCAAGGTCTTTGCCAAGAAGTACG
GCTCGCAGATTGTACCTTCCGACAATGCCATGCCCATCGAGCAAAGCGTGCTCGCCCGCCAGGGCATCGGCCCGAGCCAG
TACTCCCAGGCAGTCGAAGCGCCCGCCGAGCCGGCGGCCCTGCCTGCTTTGCAGGCCGTCGGTGCTGAGGCGAGGCTCGG
CCCAGACGCACGACATTCTGCAGGCCGACCGGAACCTACCAACCCACTCAAGCGTGCTGCCGCGTTCGTCTTAAGCTTCC
TCGTGCTCACAAGGCTTCGGAAATAG

Upstream 100 bases:

>100_bases
AACCCTGAATCAGCCTCTTTCTTGGGAGGGACAGCCACAGCCGCACTTCCCACCTGGGGAAGACGAAGCTCGCGCCACCC
GAATGGGATGATATCGGGGT

Downstream 100 bases:

>100_bases
CTCGAGTTTCAGCCTTGCTGTTCATGTAATGGCTCTGTTGATCGATATGTGAGCAGCACCGGACGATGGTGGGGCTTCAA
AGCTTGGCCCAAGGGGTTGG

Product: ribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MHYSSKPMTNPQPAPLPLWQKGLDLLKETGQEWSNDKVPRLAAALAYYTFFSLAPLLVVVIAVAGFFLGPDAVRGQLDNQ
IAGLVGQQSASAIQELVKSAYHPASGFTATAIALGAILFGVSGLFGELQDALNTIWGVAPKPDRSWVEVVKQRFVSFSMV
FGIAFLMLVSLVVSAVVSAVTGYFGALLPMPGFVPGLVDVLVSVAITTLLFAMIYKVLPDVKIAWQDVAIGAAMTAILFV
LGKSLIGLYLGQSSFGSSYGAAGSLVVVLVWVYYTVQILFFGAEFTKVFAKKYGSQIVPSDNAMPIEQSVLARQGIGPSQ
YSQAVEAPAEPAALPALQAVGAEARLGPDARHSAGRPEPTNPLKRAAAFVLSFLVLTRLRK

Sequences:

>Translated_381_residues
MHYSSKPMTNPQPAPLPLWQKGLDLLKETGQEWSNDKVPRLAAALAYYTFFSLAPLLVVVIAVAGFFLGPDAVRGQLDNQ
IAGLVGQQSASAIQELVKSAYHPASGFTATAIALGAILFGVSGLFGELQDALNTIWGVAPKPDRSWVEVVKQRFVSFSMV
FGIAFLMLVSLVVSAVVSAVTGYFGALLPMPGFVPGLVDVLVSVAITTLLFAMIYKVLPDVKIAWQDVAIGAAMTAILFV
LGKSLIGLYLGQSSFGSSYGAAGSLVVVLVWVYYTVQILFFGAEFTKVFAKKYGSQIVPSDNAMPIEQSVLARQGIGPSQ
YSQAVEAPAEPAALPALQAVGAEARLGPDARHSAGRPEPTNPLKRAAAFVLSFLVLTRLRK
>Mature_381_residues
MHYSSKPMTNPQPAPLPLWQKGLDLLKETGQEWSNDKVPRLAAALAYYTFFSLAPLLVVVIAVAGFFLGPDAVRGQLDNQ
IAGLVGQQSASAIQELVKSAYHPASGFTATAIALGAILFGVSGLFGELQDALNTIWGVAPKPDRSWVEVVKQRFVSFSMV
FGIAFLMLVSLVVSAVVSAVTGYFGALLPMPGFVPGLVDVLVSVAITTLLFAMIYKVLPDVKIAWQDVAIGAAMTAILFV
LGKSLIGLYLGQSSFGSSYGAAGSLVVVLVWVYYTVQILFFGAEFTKVFAKKYGSQIVPSDNAMPIEQSVLARQGIGPSQ
YSQAVEAPAEPAALPALQAVGAEARLGPDARHSAGRPEPTNPLKRAAAFVLSFLVLTRLRK

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=273, Percent_Identity=27.8388278388278, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 40450; Mature: 40450

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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CHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA