Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37522540

Identifier: 37522540

GI number: 37522540

Start: 3170904

End: 3171482

Strand: Direct

Name: 37522540

Synonym: glr2971

Alternate gene names: NA

Gene position: 3170904-3171482 (Clockwise)

Preceding gene: 37522539

Following gene: 37522546

Centisome position: 68.06

GC content: 58.2

Gene sequence:

>579_bases
ATGACCACAGCCGCCGGAAAAATGACCCTGGAGCAATTTCTCGCCTTCGACGACGGGACGGACACCCGCTACGAACTGGT
CGATGGAGAACTCGTCGCCATGCCCCCGGAAACCGACAGCAACAATGTGATCTCCATCTACTTGCTTGCTCAACTGCTCC
GGTTTGTTCCCCTGCGGCTTGTGCGCCACAAAGATACGGAAATCGTGGTGACCGGAAGTCGTCCGCGCGTGCGGATACCG
GATGTGCTGGTGTTGAGTGAGGAATTGTTTGCAGCCATCGGCGGCGGACGGGCGACGATCACCGCAGAAATGCCGTCTCC
GGTACTGGCGATCGAAGTCGTCTCTCCCGGCAAAGCCAGCGAAGATCGGGACTACCGCTACAAGCGCTCGGAGTACGCAG
CCAGGGGAATTACCGAATACTGGATAGTCGATCCTGGCCGGGAGCGGGTCACGGTATTGAGTTTGGTGGATGGGCTATAC
GAAGAGAGAGCCTTCGTCGGCGAGGAGACCATTGCGTTCGATATCCTCCCGCAACTGGCTCTGACAGCACAGCAAATATT
CGAAGCCGGGCGGGTATAG

Upstream 100 bases:

>100_bases
GGACCAGCCTGGTGGGCTACAAAATCGAGCGCCGGGGCAAGCAGTCGCTCCTGGTGCCCGCTAGCGTCTCGACCAACGCC
AACAGTGCAGGGCAATCGCC

Downstream 100 bases:

>100_bases
CTACAGTCTGGAGCGCACTTCACTGTTGGCGAAACAAATAATTGCAGCGCTTCAAGATGCGCAGCACTTCACCAAGTTCC
TGACTGGAGGGGCTTACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTTAAGKMTLEQFLAFDDGTDTRYELVDGELVAMPPETDSNNVISIYLLAQLLRFVPLRLVRHKDTEIVVTGSRPRVRIP
DVLVLSEELFAAIGGGRATITAEMPSPVLAIEVVSPGKASEDRDYRYKRSEYAARGITEYWIVDPGRERVTVLSLVDGLY
EERAFVGEETIAFDILPQLALTAQQIFEAGRV

Sequences:

>Translated_192_residues
MTTAAGKMTLEQFLAFDDGTDTRYELVDGELVAMPPETDSNNVISIYLLAQLLRFVPLRLVRHKDTEIVVTGSRPRVRIP
DVLVLSEELFAAIGGGRATITAEMPSPVLAIEVVSPGKASEDRDYRYKRSEYAARGITEYWIVDPGRERVTVLSLVDGLY
EERAFVGEETIAFDILPQLALTAQQIFEAGRV
>Mature_191_residues
TTAAGKMTLEQFLAFDDGTDTRYELVDGELVAMPPETDSNNVISIYLLAQLLRFVPLRLVRHKDTEIVVTGSRPRVRIPD
VLVLSEELFAAIGGGRATITAEMPSPVLAIEVVSPGKASEDRDYRYKRSEYAARGITEYWIVDPGRERVTVLSLVDGLYE
ERAFVGEETIAFDILPQLALTAQQIFEAGRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21321; Mature: 21189

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAAGKMTLEQFLAFDDGTDTRYELVDGELVAMPPETDSNNVISIYLLAQLLRFVPLRL
CCCCCHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHH
VRHKDTEIVVTGSRPRVRIPDVLVLSEELFAAIGGGRATITAEMPSPVLAIEVVSPGKAS
HCCCCCEEEEECCCCCEECCCEEEEHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCC
EDRDYRYKRSEYAARGITEYWIVDPGRERVTVLSLVDGLYEERAFVGEETIAFDILPQLA
CCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LTAQQIFEAGRV
HHHHHHHHCCCC
>Mature Secondary Structure 
TTAAGKMTLEQFLAFDDGTDTRYELVDGELVAMPPETDSNNVISIYLLAQLLRFVPLRL
CCCCHHHHHHHHHHCCCCCCCEEEEECCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHH
VRHKDTEIVVTGSRPRVRIPDVLVLSEELFAAIGGGRATITAEMPSPVLAIEVVSPGKAS
HCCCCCEEEEECCCCCEECCCEEEEHHHHHHHHCCCEEEEEECCCCCEEEEEEECCCCCC
EDRDYRYKRSEYAARGITEYWIVDPGRERVTVLSLVDGLYEERAFVGEETIAFDILPQLA
CCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
LTAQQIFEAGRV
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA