Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is 37521420
Identifier: 37521420
GI number: 37521420
Start: 1971038
End: 1971943
Strand: Reverse
Name: 37521420
Synonym: gll1851
Alternate gene names: NA
Gene position: 1971943-1971038 (Counterclockwise)
Preceding gene: 37521421
Following gene: 37521416
Centisome position: 42.33
GC content: 59.16
Gene sequence:
>906_bases ATGGGAACGGTTCGAGAATTTTTGCGGCGCACGGGTTTGCGATGGTCACTGGTGTGCGTGCTTTTCTGGATGGCACTTTG CGCACCGGCGTTCAGCCAGACCGGCGATGTGACTTTAAAACAACTGGACTACAACGGAACCGAACGCAGTTATTACGAGC ACGTTCCATCCTCCTACAGCAGTGCTTCCAGCAGCGTTCCGCTGGTCATCTTCCTGCACGGTTCGGTCAACGGCCGCACC GCCACGGTGGAAGGGGCCGCCAAACTCGCCGGCTGGACCACCCGTTCCGACGAAAAAGGCTTCATCGCCGTTTATCCGGT CGGGGGCATCGTCGTCGCCAACGGCACCAGTTCCCCCGGCTACAAATGGAACACCTACGTGTTCAACGGTGAGTCCCCGG ACGACGTCGGCTATCTGCTCGCGCTGATTAATCAACTCAAAAGCACCTACCGCATCGACCCCAACCGGATCTATATGACT GGGCATTCCAGTGGCGGGGCGATGGTCAACACCTTCATCGGCAACGGTCACGCTTCGCTGATCGCCGCCTCAGCCCCGGT CTCCGGCCCCTGGATCACCACCTTTCGCAAGTCCGAATCGTTGATGGAGCCCGGTGGGCCGATTCCAGTCTGGATCTGGC GCGGCGAAGAAGAAGACCAGATTACCGGCACGATCCCACGGGACGTCCAGGACGAGGACCAGAAGCAATTTTGGATCCAG TACAACCAGACCGACCAATCCCAGAGGACGGTCAGCGGCTCGTACGTCACCGATGTATTCACCGGCGGCAATGCAGAGGT GCGCTTTACGGAGGTCACCGGAGCGGGCCACCTCAACGACGACGATTACAGCAGCGAGATCTGGGACGAATTTTTTAGCC GCCTGACGCTCAGCGATCGCAACTGA
Upstream 100 bases:
>100_bases CGGTGATCTTTGCCCCCGTCGGCCTAATTTGTGGTGCACCCGGCCTCCGCCCCGGAGCGCCAATTTCGCTTAACCGCATT ACTACACTGAGGATCTAGCC
Downstream 100 bases:
>100_bases ATCAAGCTCAAAATCGCATTCGTAAACGGCCTCTCCGTGCGAGAGCCAGGCGTCGGTCAGCGACGAGTGACGCCTGGCTC TCGCACGCTTACGACGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MGTVREFLRRTGLRWSLVCVLFWMALCAPAFSQTGDVTLKQLDYNGTERSYYEHVPSSYSSASSSVPLVIFLHGSVNGRT ATVEGAAKLAGWTTRSDEKGFIAVYPVGGIVVANGTSSPGYKWNTYVFNGESPDDVGYLLALINQLKSTYRIDPNRIYMT GHSSGGAMVNTFIGNGHASLIAASAPVSGPWITTFRKSESLMEPGGPIPVWIWRGEEEDQITGTIPRDVQDEDQKQFWIQ YNQTDQSQRTVSGSYVTDVFTGGNAEVRFTEVTGAGHLNDDDYSSEIWDEFFSRLTLSDRN
Sequences:
>Translated_301_residues MGTVREFLRRTGLRWSLVCVLFWMALCAPAFSQTGDVTLKQLDYNGTERSYYEHVPSSYSSASSSVPLVIFLHGSVNGRT ATVEGAAKLAGWTTRSDEKGFIAVYPVGGIVVANGTSSPGYKWNTYVFNGESPDDVGYLLALINQLKSTYRIDPNRIYMT GHSSGGAMVNTFIGNGHASLIAASAPVSGPWITTFRKSESLMEPGGPIPVWIWRGEEEDQITGTIPRDVQDEDQKQFWIQ YNQTDQSQRTVSGSYVTDVFTGGNAEVRFTEVTGAGHLNDDDYSSEIWDEFFSRLTLSDRN >Mature_300_residues GTVREFLRRTGLRWSLVCVLFWMALCAPAFSQTGDVTLKQLDYNGTERSYYEHVPSSYSSASSSVPLVIFLHGSVNGRTA TVEGAAKLAGWTTRSDEKGFIAVYPVGGIVVANGTSSPGYKWNTYVFNGESPDDVGYLLALINQLKSTYRIDPNRIYMTG HSSGGAMVNTFIGNGHASLIAASAPVSGPWITTFRKSESLMEPGGPIPVWIWRGEEEDQITGTIPRDVQDEDQKQFWIQY NQTDQSQRTVSGSYVTDVFTGGNAEVRFTEVTGAGHLNDDDYSSEIWDEFFSRLTLSDRN
Specific function: Unknown
COG id: COG3509
COG function: function code Q; Poly(3-hydroxybutyrate) depolymerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33208; Mature: 33077
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTVREFLRRTGLRWSLVCVLFWMALCAPAFSQTGDVTLKQLDYNGTERSYYEHVPSSYS CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHCCCCCC SASSSVPLVIFLHGSVNGRTATVEGAAKLAGWTTRSDEKGFIAVYPVGGIVVANGTSSPG CCCCCCCEEEEEECCCCCCEEEECCHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCCC YKWNTYVFNGESPDDVGYLLALINQLKSTYRIDPNRIYMTGHSSGGAMVNTFIGNGHASL CEEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCEEEEEECCCCEEE IAASAPVSGPWITTFRKSESLMEPGGPIPVWIWRGEEEDQITGTIPRDVQDEDQKQFWIQ EEECCCCCCCEEEEEECCCHHCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCEEEEEE YNQTDQSQRTVSGSYVTDVFTGGNAEVRFTEVTGAGHLNDDDYSSEIWDEFFSRLTLSDR ECCCCCCHHEECCCEEEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC N C >Mature Secondary Structure GTVREFLRRTGLRWSLVCVLFWMALCAPAFSQTGDVTLKQLDYNGTERSYYEHVPSSYS CHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHCCCCCC SASSSVPLVIFLHGSVNGRTATVEGAAKLAGWTTRSDEKGFIAVYPVGGIVVANGTSSPG CCCCCCCEEEEEECCCCCCEEEECCHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCCC YKWNTYVFNGESPDDVGYLLALINQLKSTYRIDPNRIYMTGHSSGGAMVNTFIGNGHASL CEEEEEEECCCCCHHHHHHHHHHHHHHHHEEECCCEEEEEECCCCCCEEEEEECCCCEEE IAASAPVSGPWITTFRKSESLMEPGGPIPVWIWRGEEEDQITGTIPRDVQDEDQKQFWIQ EEECCCCCCCEEEEEECCCHHCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCEEEEEE YNQTDQSQRTVSGSYVTDVFTGGNAEVRFTEVTGAGHLNDDDYSSEIWDEFFSRLTLSDR ECCCCCCHHEECCCEEEEEEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA