Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is 37521389
Identifier: 37521389
GI number: 37521389
Start: 1940143
End: 1940574
Strand: Direct
Name: 37521389
Synonym: glr1820
Alternate gene names: NA
Gene position: 1940143-1940574 (Clockwise)
Preceding gene: 37521387
Following gene: 37521391
Centisome position: 41.64
GC content: 54.63
Gene sequence:
>432_bases ATGTCGGATAAATTGGACACAACGCTAAATGCTTTTCGCGAAAACATCGCCACTTTTGCCGTGGGCAAGGCGGTTCGCAA CATCGAGGCCTGGCGCAAGGATCTGCTTGAAGCCGGTCCCGAGTTTGAAGAGATTGCAGGAGAGCTGGAGAAGCTCGAAG GCTTGCTCAAGGAAGAACAGGTCGATGGCAAATCGGTCGGCAAACTCCTTGGCAAACTGAGTAAAGGCGTCAAAAAGGTG GCCAAGGGCGCTGAATCCGGCCTTGGCGACAAGCTCGAAGAGCTCAGCCAACTGATGGACAAGGCGGCCAAGGAAGACAT CGAGGACGGCGGCAAAGCCGGAAAATCCGACCGCGATGGCGGTAAGAAAGCCGACGCCAAAGCCGACGAAGAAGACAAAA CCAGCACCAAAAAGGCCGGCACCAAAAAGTAA
Upstream 100 bases:
>100_bases CTAAATTTCAGCCCTTGGAGCTTGCGCCGACCTTGACGGCAAATCCGTCCAAAGGCGGGCTCGAACCCTTCACAAACGCG CTTGCGTAGGAGCACTTTCA
Downstream 100 bases:
>100_bases CTTACGACCTGCGATGATGCACCGGGCGGCTGCGGGGTTCTCCTGGCAGCCGCCCGGTGTCTTCGCCGCGACTTACGGAC ATCGGCCGGCTTCAGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSDKLDTTLNAFRENIATFAVGKAVRNIEAWRKDLLEAGPEFEEIAGELEKLEGLLKEEQVDGKSVGKLLGKLSKGVKKV AKGAESGLGDKLEELSQLMDKAAKEDIEDGGKAGKSDRDGGKKADAKADEEDKTSTKKAGTKK
Sequences:
>Translated_143_residues MSDKLDTTLNAFRENIATFAVGKAVRNIEAWRKDLLEAGPEFEEIAGELEKLEGLLKEEQVDGKSVGKLLGKLSKGVKKV AKGAESGLGDKLEELSQLMDKAAKEDIEDGGKAGKSDRDGGKKADAKADEEDKTSTKKAGTKK >Mature_142_residues SDKLDTTLNAFRENIATFAVGKAVRNIEAWRKDLLEAGPEFEEIAGELEKLEGLLKEEQVDGKSVGKLLGKLSKGVKKVA KGAESGLGDKLEELSQLMDKAAKEDIEDGGKAGKSDRDGGKKADAKADEEDKTSTKKAGTKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15321; Mature: 15190
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKLDTTLNAFRENIATFAVGKAVRNIEAWRKDLLEAGPEFEEIAGELEKLEGLLKEEQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VDGKSVGKLLGKLSKGVKKVAKGAESGLGDKLEELSQLMDKAAKEDIEDGGKAGKSDRDG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GKKADAKADEEDKTSTKKAGTKK CCCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure SDKLDTTLNAFRENIATFAVGKAVRNIEAWRKDLLEAGPEFEEIAGELEKLEGLLKEEQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH VDGKSVGKLLGKLSKGVKKVAKGAESGLGDKLEELSQLMDKAAKEDIEDGGKAGKSDRDG CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GKKADAKADEEDKTSTKKAGTKK CCCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA