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The map label for this gene is csgD [C]

Identifier: 37521368

GI number: 37521368

Start: 1919075

End: 1919299

Strand: Direct

Name: csgD [C]

Synonym: gsr1799

Alternate gene names: 37521368

Gene position: 1919075-1919299 (Clockwise)

Preceding gene: 37521359

Following gene: 37521369

Centisome position: 41.19

GC content: 67.56

Gene sequence:

>225_bases
GTGCGATCCCAGCCGCCGCCCGCTGCCCTGACGGCCCTGACTCCCCGCGAGCGGCAGGTCTCGGGACTGATCGCCCGGGG
AGCGAGCAACGCCGAGATTGCCAGGTCGCTCTACATCTCAGAAGGAACGGTGAAGTTCCACATCACCAAGATCCTCAGCC
GGCTCGGGGTGCGCGACCGCACCCAGGCGGCGATTCTGGCCAACGCCTGTGCCGAGTGGCTTTGA

Upstream 100 bases:

>100_bases
ATACTTATGAATCGAGAGCGCGCGGACTTGTGTAGCTTTCCTACCGGAGAATAGCGCTATTCTCCAGCAGGACATTGGGG
TTACGGCCGCTTCTCCCCCG

Downstream 100 bases:

>100_bases
AGGTTCCCAGCTGCAAAGGACAGGTACAGACCTGCGCATCCGACTTGCGAGGGAAGCGTCCGCCCTACCGGCTGTGCGAT
GTTCATGACAATCGAGTAGG

Product: transcriptional regulator

Products: NA

Alternate protein names: Response Regulator Receiver Domain Protein; Two Component LuxR Family Transcriptional Regulator; Two Component Transcriptional Regulator LuxR Family; Transcriptional Regulator; LuxR Family Two Component Transcriptional Regulator; Two-Component LuxR Family Transcriptional Regulator

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MRSQPPPAALTALTPRERQVSGLIARGASNAEIARSLYISEGTVKFHITKILSRLGVRDRTQAAILANACAEWL

Sequences:

>Translated_74_residues
MRSQPPPAALTALTPRERQVSGLIARGASNAEIARSLYISEGTVKFHITKILSRLGVRDRTQAAILANACAEWL
>Mature_74_residues
MRSQPPPAALTALTPRERQVSGLIARGASNAEIARSLYISEGTVKFHITKILSRLGVRDRTQAAILANACAEWL

Specific function: Necessary For Transcription Of The Csgab Operon. May Have The Capability To Respond To Starvation And/Or High Cell Density By Activating Csgba Transcription. [C]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8015; Mature: 8015

Theoretical pI: Translated: 11.33; Mature: 11.33

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSQPPPAALTALTPRERQVSGLIARGASNAEIARSLYISEGTVKFHITKILSRLGVRDR
CCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHHCCCCCC
TQAAILANACAEWL
HHHHHHHHHHHHCC
>Mature Secondary Structure
MRSQPPPAALTALTPRERQVSGLIARGASNAEIARSLYISEGTVKFHITKILSRLGVRDR
CCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHHCCCCCC
TQAAILANACAEWL
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA