Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37521359

Identifier: 37521359

GI number: 37521359

Start: 1906336

End: 1907988

Strand: Direct

Name: 37521359

Synonym: glr1790

Alternate gene names: NA

Gene position: 1906336-1907988 (Clockwise)

Preceding gene: 37521347

Following gene: 37521368

Centisome position: 40.92

GC content: 57.47

Gene sequence:

>1653_bases
ATGCGCCTCAAGTTAGCGTTTGTTTGTGGATTTTCAGCGCTTTTTGCATTAAATCCTGTGCAGTTGCCAGAGCACTTCAT
GGGTTTGGTTATAGATCAGCCTTCTGCCTGGGCGGCCTCGTCGCCGACCGTGAGCAGCTTCTCACCGACCAGTGGCGGAC
CTGGCACTCAAGTCACCATCAACGGCAGCAACTTCGACGGTCTCGAAAATATCAACTTCAACGGTGCCTACGCAGCCTAT
ATCTGGGTGTCTTCCAGCCAACTGAAGGCGACGGTTCCATCGGGGGCAACCACTGGTAAAATCCAAGTCAAAACAACTGT
CGGTTCCGCCAGTAGCTCCAGTCAATTTACGGTGCCTGAGGTGATCAGCAGTTTCTCGCCATCCAGCGGTCCAGTCGGAA
CTTCGGTGACCATCAACGGCAGCGGATTCAGCAATAGCGTCAGTTCTGTTAAATTCGGAGACGGCTACGTCAGTTTCGTG
CGCGAATCTGCGGGAAAGATTCAAGCAACGACCAATACCAGTGCCTCCACCGGCAAGATCATCATCAACAATGGAGGCAC
CCTGATCAGCAGTTCCGGAACTTTTACAGTGACCACACTCCAACCGAGAGTGGATAGCTTCACGCCGACCAACGGGCCAC
CGGGTACTAAAGTCGTCATCAAGGGTGCAAATTTTATCAACGTGAACTCTGTTCAAATCGGCAGCATCTACCTTGCCTTC
ACGGTAGATTCTGAAACCCAGATCACGGCCACCACCAAAACCGGCAACGTGAGCGGGAAGATTACAGTCACCACCCTGGA
CAACGGTTCGGCCAGCAGTGCGGGCAGTTTCACCAGTGATCCGCCCAAGATCACGAGCTTTTCTCCCATGAGCGGCTCGG
CTTATCCTGTGACCACTGTCACGATTAACGGCCTCAACCTGGTCGGGATCAGCGGCGTTTCCTTTGATGGCGCCCCAACC
AGTTACCGGATCCTCTCCGACAAGAAGTTGGAGGCTGAAGTCCCCTGCCCGGCCCGCACCGGGACGATCTCCGTCAAAAC
CTTCGCCGGGACCATTTACAGCACCTCCAACTTTGGGGTGCAAGACGCCGGGGTTCCCGAAGACATCCCGACTCCGATCG
CCTGCCTGGTCACTCCCACCACTCCTCCGCCGGGCTTCACCGCCGCGACCTACTGGGCGGTGGCCCTCGTCGACACGGCC
AAATCGGGCACCGGTTCGGTCGAGGTGGCCTACACCCAACTGTGGTGCACCATCGACGGGGTCGATACCAAACTGGCGGA
CGACGTGGGTACGCTGTTCGGGGGGCTTTTCTCCCGCGACACCTGGGATGGCGCCCCCGTATCCACCCCGATGCCCTGGA
CGTACAACCCCACCAACAATTCGGCCATCGTCTATCCTTCCGAGAACCCGGATTTGTTTTACCACTGGTACATGCCTACA
CCCCGCGCCTCCTGGCCCTCCGATGCTTCGGTCACCAGCTGCCGGGTCAAGACTCGGGTGAAAATTTCTGGTTCGGCGCT
GTTGCAGATGGGCGGGGACTGGTGGTTGAACTCGACCGCCGCCTGGAACGGCGAACAGGTCAACAACCGGGCCATGGGCA
ACACCAACTGGTACTTCCCGAACGGGGAATGGCAGGACATTACGTTCCCCTAA

Upstream 100 bases:

>100_bases
GGTTTTAGGCTTATCGATTATGCGTAAATGTGTTCAGGCTTTGTAGCTGTTCGCGTTCTTGCCAAGAGTTTGTCGAATCA
ACAGAATTTCCGGAGAATTT

Downstream 100 bases:

>100_bases
CACCTTCAAACTCCTTGACTGCCGCTCCGCCCAAGCAGGCGGAGCGTTTTGTTTGCGATCAAATCGAGCATCACGTTGCG
GTAGGCAAGGGCCACCCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MRLKLAFVCGFSALFALNPVQLPEHFMGLVIDQPSAWAASSPTVSSFSPTSGGPGTQVTINGSNFDGLENINFNGAYAAY
IWVSSSQLKATVPSGATTGKIQVKTTVGSASSSSQFTVPEVISSFSPSSGPVGTSVTINGSGFSNSVSSVKFGDGYVSFV
RESAGKIQATTNTSASTGKIIINNGGTLISSSGTFTVTTLQPRVDSFTPTNGPPGTKVVIKGANFINVNSVQIGSIYLAF
TVDSETQITATTKTGNVSGKITVTTLDNGSASSAGSFTSDPPKITSFSPMSGSAYPVTTVTINGLNLVGISGVSFDGAPT
SYRILSDKKLEAEVPCPARTGTISVKTFAGTIYSTSNFGVQDAGVPEDIPTPIACLVTPTTPPPGFTAATYWAVALVDTA
KSGTGSVEVAYTQLWCTIDGVDTKLADDVGTLFGGLFSRDTWDGAPVSTPMPWTYNPTNNSAIVYPSENPDLFYHWYMPT
PRASWPSDASVTSCRVKTRVKISGSALLQMGGDWWLNSTAAWNGEQVNNRAMGNTNWYFPNGEWQDITFP

Sequences:

>Translated_550_residues
MRLKLAFVCGFSALFALNPVQLPEHFMGLVIDQPSAWAASSPTVSSFSPTSGGPGTQVTINGSNFDGLENINFNGAYAAY
IWVSSSQLKATVPSGATTGKIQVKTTVGSASSSSQFTVPEVISSFSPSSGPVGTSVTINGSGFSNSVSSVKFGDGYVSFV
RESAGKIQATTNTSASTGKIIINNGGTLISSSGTFTVTTLQPRVDSFTPTNGPPGTKVVIKGANFINVNSVQIGSIYLAF
TVDSETQITATTKTGNVSGKITVTTLDNGSASSAGSFTSDPPKITSFSPMSGSAYPVTTVTINGLNLVGISGVSFDGAPT
SYRILSDKKLEAEVPCPARTGTISVKTFAGTIYSTSNFGVQDAGVPEDIPTPIACLVTPTTPPPGFTAATYWAVALVDTA
KSGTGSVEVAYTQLWCTIDGVDTKLADDVGTLFGGLFSRDTWDGAPVSTPMPWTYNPTNNSAIVYPSENPDLFYHWYMPT
PRASWPSDASVTSCRVKTRVKISGSALLQMGGDWWLNSTAAWNGEQVNNRAMGNTNWYFPNGEWQDITFP
>Mature_550_residues
MRLKLAFVCGFSALFALNPVQLPEHFMGLVIDQPSAWAASSPTVSSFSPTSGGPGTQVTINGSNFDGLENINFNGAYAAY
IWVSSSQLKATVPSGATTGKIQVKTTVGSASSSSQFTVPEVISSFSPSSGPVGTSVTINGSGFSNSVSSVKFGDGYVSFV
RESAGKIQATTNTSASTGKIIINNGGTLISSSGTFTVTTLQPRVDSFTPTNGPPGTKVVIKGANFINVNSVQIGSIYLAF
TVDSETQITATTKTGNVSGKITVTTLDNGSASSAGSFTSDPPKITSFSPMSGSAYPVTTVTINGLNLVGISGVSFDGAPT
SYRILSDKKLEAEVPCPARTGTISVKTFAGTIYSTSNFGVQDAGVPEDIPTPIACLVTPTTPPPGFTAATYWAVALVDTA
KSGTGSVEVAYTQLWCTIDGVDTKLADDVGTLFGGLFSRDTWDGAPVSTPMPWTYNPTNNSAIVYPSENPDLFYHWYMPT
PRASWPSDASVTSCRVKTRVKISGSALLQMGGDWWLNSTAAWNGEQVNNRAMGNTNWYFPNGEWQDITFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57504; Mature: 57504

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLKLAFVCGFSALFALNPVQLPEHFMGLVIDQPSAWAASSPTVSSFSPTSGGPGTQVTI
CEEEEEEEECCHHHHCCCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE
NGSNFDGLENINFNGAYAAYIWVSSSQLKATVPSGATTGKIQVKTTVGSASSSSQFTVPE
CCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCEEEEEEEECCCCCCCCEEHHH
VISSFSPSSGPVGTSVTINGSGFSNSVSSVKFGDGYVSFVRESAGKIQATTNTSASTGKI
HHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHCCCEEEEECCCCCCCCEE
IINNGGTLISSSGTFTVTTLQPRVDSFTPTNGPPGTKVVIKGANFINVNSVQIGSIYLAF
EEECCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEECEEEEEEEEEEE
TVDSETQITATTKTGNVSGKITVTTLDNGSASSAGSFTSDPPKITSFSPMSGSAYPVTTV
EECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEE
TINGLNLVGISGVSFDGAPTSYRILSDKKLEAEVPCPARTGTISVKTFAGTIYSTSNFGV
EECCEEEEEEECEECCCCCCEEEEECCCCEEECCCCCCCCCEEEEEEEEEEEEECCCCCC
QDAGVPEDIPTPIACLVTPTTPPPGFTAATYWAVALVDTAKSGTGSVEVAYTQLWCTIDG
CCCCCCCCCCCCEEEEEECCCCCCCCCHHHEEEEEEEECCCCCCCEEEEEEEEEEEEECC
VDTKLADDVGTLFGGLFSRDTWDGAPVSTPMPWTYNPTNNSAIVYPSENPDLFYHWYMPT
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCEEEEEECCC
PRASWPSDASVTSCRVKTRVKISGSALLQMGGDWWLNSTAAWNGEQVNNRAMGNTNWYFP
CCCCCCCCCCEEEEEEEEEEEECCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCEECC
NGEWQDITFP
CCCEEECCCC
>Mature Secondary Structure
MRLKLAFVCGFSALFALNPVQLPEHFMGLVIDQPSAWAASSPTVSSFSPTSGGPGTQVTI
CEEEEEEEECCHHHHCCCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEE
NGSNFDGLENINFNGAYAAYIWVSSSQLKATVPSGATTGKIQVKTTVGSASSSSQFTVPE
CCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCCCCCEEEEEEEECCCCCCCCEEHHH
VISSFSPSSGPVGTSVTINGSGFSNSVSSVKFGDGYVSFVRESAGKIQATTNTSASTGKI
HHHHCCCCCCCCCEEEEECCCCCCCCCCEEEECCHHHHHHHHCCCEEEEECCCCCCCCEE
IINNGGTLISSSGTFTVTTLQPRVDSFTPTNGPPGTKVVIKGANFINVNSVQIGSIYLAF
EEECCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCEEEECEEEEEEEEEEE
TVDSETQITATTKTGNVSGKITVTTLDNGSASSAGSFTSDPPKITSFSPMSGSAYPVTTV
EECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEE
TINGLNLVGISGVSFDGAPTSYRILSDKKLEAEVPCPARTGTISVKTFAGTIYSTSNFGV
EECCEEEEEEECEECCCCCCEEEEECCCCEEECCCCCCCCCEEEEEEEEEEEEECCCCCC
QDAGVPEDIPTPIACLVTPTTPPPGFTAATYWAVALVDTAKSGTGSVEVAYTQLWCTIDG
CCCCCCCCCCCCEEEEEECCCCCCCCCHHHEEEEEEEECCCCCCCEEEEEEEEEEEEECC
VDTKLADDVGTLFGGLFSRDTWDGAPVSTPMPWTYNPTNNSAIVYPSENPDLFYHWYMPT
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCEEEEEECCC
PRASWPSDASVTSCRVKTRVKISGSALLQMGGDWWLNSTAAWNGEQVNNRAMGNTNWYFP
CCCCCCCCCCEEEEEEEEEEEECCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCEECC
NGEWQDITFP
CCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA