Click here to switch to the map view.

The map label for this gene is smf [H]

Identifier: 37521330

GI number: 37521330

Start: 1867600

End: 1868682

Strand: Reverse

Name: smf [H]

Synonym: gll1761

Alternate gene names: 37521330

Gene position: 1868682-1867600 (Counterclockwise)

Preceding gene: 37521331

Following gene: 37521328

Centisome position: 40.11

GC content: 66.02

Gene sequence:

>1083_bases
TTGACAAGTGAGCGGGCTTATTGGGTCGCCTGGCGGCAATCGCCGGGGGTTGGTCCTCTGACAATCCGGCGGCTCAGGGA
GCATTTCGGGTCGTTGCAGGCGGCCTGGGAAGCGGCAGAGACCGAGTTCTCGGCGGTCGAGGGCTGGAGCGCCCGCAAAG
GGCTCGAAAGCCGTCGCTACCGCGAGCGCACCGATCCGGGGCTTTTGCTCGAAGCACTGGAGGACCGTTGGCCATCCTTC
TGGACGCCGGCCGACGGGGATTATCCACCGCTGTTGCGCGAGATTCCCGACCCGCCCCCTTTGCTTTTTTACCGCGGGCC
GCTGCGGCAACTGTCGCCCGCGGTCGCGGTGGTGGGAACCCGTCACCCAAGCGACTACGGCAGGCGCTGGGCCGCCCAAA
TCGCCGAAACCTTGGCTGCGGCAGGCTTTCTGGTGATTTCCGGTCTGGCTGCAGGCATCGACGGTATCGCCCACGAGGCC
GCCCTTGGGGTCGGGAAGACCGCAGCGGTGCTCGCAACCAGCCTGACGCGCGTCTATCCGCCTGAGCACGCGGGTATGGC
TGCCGAGATTGCCCATAGCGGTCTGTTGCTGAGCGAATATGCCCCTGAGGAAGAAACCCTCACCCACAACTTTCCCCGCC
GCAACCGGATTGTCGTGGGCATGAGCCTCGCCACGATCGTCATCGAAGCGCCCGAGCGCTCCGGTGCGCTCATCTCGGCG
TATCTGGCCTGCGATTACAACCGGGAATTGTTCGCTCTGCCCGGGGCCATCGATACGCCCCAGGCGCAAGGGTGCCTCAA
GCTGATTTCCCAGGGGGCGCGGGTCATCCTTGGCCTCGAAGCGCTGCTTGCCGATCTGGGAGCCCAACTGGTGCGCGCCA
CGGTGCCTTCCGCGCTACCCCCGGTGCTCGACGGCGACGAGAAGCGCATCTGGGATCAGATCCAGGGCGACGGCTGCTCC
TTCGACGAATTGGCTTTGGGGACGGGACTTACTACCGACCGGCTCGCAAGCGCCCTACTCACCCTCGAACTGCGGGGACT
GCTCGTGCAGCAGGCCGGGTCGCGCTACGGCCGGGCACTTTGA

Upstream 100 bases:

>100_bases
GATTGACCACGCACCTGTCCGGTGGGCGGCTGGCAGCGCCGAACCGTTGCCGGTAAGGGCGAGGCGGGGTGATGCTGCCA
TCGTCGGATGGAGTGGGGCA

Downstream 100 bases:

>100_bases
GCCGGGGCGTCCGCCAGGGCAAAAGTCAGCGAACTCCAGAAGCTTTCCCAATCGACATTGCGGCAGTCCCGGGCGCAGGC
GCGCATGTGCACCAGCCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MTSERAYWVAWRQSPGVGPLTIRRLREHFGSLQAAWEAAETEFSAVEGWSARKGLESRRYRERTDPGLLLEALEDRWPSF
WTPADGDYPPLLREIPDPPPLLFYRGPLRQLSPAVAVVGTRHPSDYGRRWAAQIAETLAAAGFLVISGLAAGIDGIAHEA
ALGVGKTAAVLATSLTRVYPPEHAGMAAEIAHSGLLLSEYAPEEETLTHNFPRRNRIVVGMSLATIVIEAPERSGALISA
YLACDYNRELFALPGAIDTPQAQGCLKLISQGARVILGLEALLADLGAQLVRATVPSALPPVLDGDEKRIWDQIQGDGCS
FDELALGTGLTTDRLASALLTLELRGLLVQQAGSRYGRAL

Sequences:

>Translated_360_residues
MTSERAYWVAWRQSPGVGPLTIRRLREHFGSLQAAWEAAETEFSAVEGWSARKGLESRRYRERTDPGLLLEALEDRWPSF
WTPADGDYPPLLREIPDPPPLLFYRGPLRQLSPAVAVVGTRHPSDYGRRWAAQIAETLAAAGFLVISGLAAGIDGIAHEA
ALGVGKTAAVLATSLTRVYPPEHAGMAAEIAHSGLLLSEYAPEEETLTHNFPRRNRIVVGMSLATIVIEAPERSGALISA
YLACDYNRELFALPGAIDTPQAQGCLKLISQGARVILGLEALLADLGAQLVRATVPSALPPVLDGDEKRIWDQIQGDGCS
FDELALGTGLTTDRLASALLTLELRGLLVQQAGSRYGRAL
>Mature_359_residues
TSERAYWVAWRQSPGVGPLTIRRLREHFGSLQAAWEAAETEFSAVEGWSARKGLESRRYRERTDPGLLLEALEDRWPSFW
TPADGDYPPLLREIPDPPPLLFYRGPLRQLSPAVAVVGTRHPSDYGRRWAAQIAETLAAAGFLVISGLAAGIDGIAHEAA
LGVGKTAAVLATSLTRVYPPEHAGMAAEIAHSGLLLSEYAPEEETLTHNFPRRNRIVVGMSLATIVIEAPERSGALISAY
LACDYNRELFALPGAIDTPQAQGCLKLISQGARVILGLEALLADLGAQLVRATVPSALPPVLDGDEKRIWDQIQGDGCSF
DELALGTGLTTDRLASALLTLELRGLLVQQAGSRYGRAL

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=208, Percent_Identity=46.1538461538462, Blast_Score=153, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 38890; Mature: 38759

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSERAYWVAWRQSPGVGPLTIRRLREHFGSLQAAWEAAETEFSAVEGWSARKGLESRRY
CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHH
RERTDPGLLLEALEDRWPSFWTPADGDYPPLLREIPDPPPLLFYRGPLRQLSPAVAVVGT
HHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCHHHHCCCEEEEEC
RHPSDYGRRWAAQIAETLAAAGFLVISGLAAGIDGIAHEAALGVGKTAAVLATSLTRVYP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PEHAGMAAEIAHSGLLLSEYAPEEETLTHNFPRRNRIVVGMSLATIVIEAPERSGALISA
CCCCCHHHHHHHCCEEHHHCCCCHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEE
YLACDYNRELFALPGAIDTPQAQGCLKLISQGARVILGLEALLADLGAQLVRATVPSALP
EEEECCCCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHCC
PVLDGDEKRIWDQIQGDGCSFDELALGTGLTTDRLASALLTLELRGLLVQQAGSRYGRAL
CCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSERAYWVAWRQSPGVGPLTIRRLREHFGSLQAAWEAAETEFSAVEGWSARKGLESRRY
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHH
RERTDPGLLLEALEDRWPSFWTPADGDYPPLLREIPDPPPLLFYRGPLRQLSPAVAVVGT
HHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCHHHHCCCEEEEEC
RHPSDYGRRWAAQIAETLAAAGFLVISGLAAGIDGIAHEAALGVGKTAAVLATSLTRVYP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PEHAGMAAEIAHSGLLLSEYAPEEETLTHNFPRRNRIVVGMSLATIVIEAPERSGALISA
CCCCCHHHHHHHCCEEHHHCCCCHHHHHCCCCCCCEEEEEEEEEEEEEECCCCCCCEEEE
YLACDYNRELFALPGAIDTPQAQGCLKLISQGARVILGLEALLADLGAQLVRATVPSALP
EEEECCCCCEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHCC
PVLDGDEKRIWDQIQGDGCSFDELALGTGLTTDRLASALLTLELRGLLVQQAGSRYGRAL
CCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]