Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

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The map label for this gene is 37521307

Identifier: 37521307

GI number: 37521307

Start: 1843244

End: 1843717

Strand: Reverse

Name: 37521307

Synonym: gll1738

Alternate gene names: NA

Gene position: 1843717-1843244 (Counterclockwise)

Preceding gene: 37521308

Following gene: 37521306

Centisome position: 39.57

GC content: 66.03

Gene sequence:

>474_bases
ATGGACCCGCATCGCTTCGAACAACTGAGCGCTTATCTGGACGGCGAACTGTCCACCGCCGAACAACAACAGGTCGAGCA
GTGGCTCCAGGCGGATCCGGCGGCCCGCAAGCTCTACGAAGACCTGCTTAAACTGCAGCGCTCCAGCCGCGCATTGGGCG
CTCCGGCTTTGCCGCCGCGGCTGTCCGATCGAGTGTTTGACCGTCTCGAGGCCCGGCGGCGGTGGCTGAGCGGCTCCCTT
ACCACCGCCGCCGCCCTGCTCTTCGCCGTGGTAGGGTACTGGTGGCAAAGTCCCGACCGCAAACCGATCCTCACCGCCGG
CTCCGACCTTACCGGAGTTGAAGTCGCCCGCGAGCCCGCCCCACCACTGATGGAGATGGCGGCTCGCAGCTACCTGTTGG
AGGATCGTGCCCCCGAGGATGCCTACGCCATTCTCCTCGAGCGCGAGGAGATCTCGCTGCCGAACGAGCGCTGA

Upstream 100 bases:

>100_bases
TCTCCGTCGGCACCGTCAAGTCCCGCATCGCCCGGGCCCGGCGCCGTCTGCAGTCGCAACTGAACGCTTACCTGTAAGCT
CCCCTGCCCCCTGTAATTCC

Downstream 100 bases:

>100_bases
TGAACTGGTTGTTACACTGCGCTGAGCGACGATTCGGGTGGGCGCTTGTCTACCTGGGCTGTCTGGTGTTGCTCTTGGGC
CATGCCCTACCGGTGAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MDPHRFEQLSAYLDGELSTAEQQQVEQWLQADPAARKLYEDLLKLQRSSRALGAPALPPRLSDRVFDRLEARRRWLSGSL
TTAAALLFAVVGYWWQSPDRKPILTAGSDLTGVEVAREPAPPLMEMAARSYLLEDRAPEDAYAILLEREEISLPNER

Sequences:

>Translated_157_residues
MDPHRFEQLSAYLDGELSTAEQQQVEQWLQADPAARKLYEDLLKLQRSSRALGAPALPPRLSDRVFDRLEARRRWLSGSL
TTAAALLFAVVGYWWQSPDRKPILTAGSDLTGVEVAREPAPPLMEMAARSYLLEDRAPEDAYAILLEREEISLPNER
>Mature_157_residues
MDPHRFEQLSAYLDGELSTAEQQQVEQWLQADPAARKLYEDLLKLQRSSRALGAPALPPRLSDRVFDRLEARRRWLSGSL
TTAAALLFAVVGYWWQSPDRKPILTAGSDLTGVEVAREPAPPLMEMAARSYLLEDRAPEDAYAILLEREEISLPNER

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17775; Mature: 17775

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPHRFEQLSAYLDGELSTAEQQQVEQWLQADPAARKLYEDLLKLQRSSRALGAPALPPR
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH
LSDRVFDRLEARRRWLSGSLTTAAALLFAVVGYWWQSPDRKPILTAGSDLTGVEVAREPA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCCC
PPLMEMAARSYLLEDRAPEDAYAILLEREEISLPNER
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDPHRFEQLSAYLDGELSTAEQQQVEQWLQADPAARKLYEDLLKLQRSSRALGAPALPPR
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH
LSDRVFDRLEARRRWLSGSLTTAAALLFAVVGYWWQSPDRKPILTAGSDLTGVEVAREPA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCCC
PPLMEMAARSYLLEDRAPEDAYAILLEREEISLPNER
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA