Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
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Accession | NC_005125 |
Length | 4,659,019 |
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The map label for this gene is 37521307
Identifier: 37521307
GI number: 37521307
Start: 1843244
End: 1843717
Strand: Reverse
Name: 37521307
Synonym: gll1738
Alternate gene names: NA
Gene position: 1843717-1843244 (Counterclockwise)
Preceding gene: 37521308
Following gene: 37521306
Centisome position: 39.57
GC content: 66.03
Gene sequence:
>474_bases ATGGACCCGCATCGCTTCGAACAACTGAGCGCTTATCTGGACGGCGAACTGTCCACCGCCGAACAACAACAGGTCGAGCA GTGGCTCCAGGCGGATCCGGCGGCCCGCAAGCTCTACGAAGACCTGCTTAAACTGCAGCGCTCCAGCCGCGCATTGGGCG CTCCGGCTTTGCCGCCGCGGCTGTCCGATCGAGTGTTTGACCGTCTCGAGGCCCGGCGGCGGTGGCTGAGCGGCTCCCTT ACCACCGCCGCCGCCCTGCTCTTCGCCGTGGTAGGGTACTGGTGGCAAAGTCCCGACCGCAAACCGATCCTCACCGCCGG CTCCGACCTTACCGGAGTTGAAGTCGCCCGCGAGCCCGCCCCACCACTGATGGAGATGGCGGCTCGCAGCTACCTGTTGG AGGATCGTGCCCCCGAGGATGCCTACGCCATTCTCCTCGAGCGCGAGGAGATCTCGCTGCCGAACGAGCGCTGA
Upstream 100 bases:
>100_bases TCTCCGTCGGCACCGTCAAGTCCCGCATCGCCCGGGCCCGGCGCCGTCTGCAGTCGCAACTGAACGCTTACCTGTAAGCT CCCCTGCCCCCTGTAATTCC
Downstream 100 bases:
>100_bases TGAACTGGTTGTTACACTGCGCTGAGCGACGATTCGGGTGGGCGCTTGTCTACCTGGGCTGTCTGGTGTTGCTCTTGGGC CATGCCCTACCGGTGAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MDPHRFEQLSAYLDGELSTAEQQQVEQWLQADPAARKLYEDLLKLQRSSRALGAPALPPRLSDRVFDRLEARRRWLSGSL TTAAALLFAVVGYWWQSPDRKPILTAGSDLTGVEVAREPAPPLMEMAARSYLLEDRAPEDAYAILLEREEISLPNER
Sequences:
>Translated_157_residues MDPHRFEQLSAYLDGELSTAEQQQVEQWLQADPAARKLYEDLLKLQRSSRALGAPALPPRLSDRVFDRLEARRRWLSGSL TTAAALLFAVVGYWWQSPDRKPILTAGSDLTGVEVAREPAPPLMEMAARSYLLEDRAPEDAYAILLEREEISLPNER >Mature_157_residues MDPHRFEQLSAYLDGELSTAEQQQVEQWLQADPAARKLYEDLLKLQRSSRALGAPALPPRLSDRVFDRLEARRRWLSGSL TTAAALLFAVVGYWWQSPDRKPILTAGSDLTGVEVAREPAPPLMEMAARSYLLEDRAPEDAYAILLEREEISLPNER
Specific function: Unknown
COG id: COG5662
COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17775; Mature: 17775
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPHRFEQLSAYLDGELSTAEQQQVEQWLQADPAARKLYEDLLKLQRSSRALGAPALPPR CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH LSDRVFDRLEARRRWLSGSLTTAAALLFAVVGYWWQSPDRKPILTAGSDLTGVEVAREPA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCCC PPLMEMAARSYLLEDRAPEDAYAILLEREEISLPNER CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDPHRFEQLSAYLDGELSTAEQQQVEQWLQADPAARKLYEDLLKLQRSSRALGAPALPPR CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCH LSDRVFDRLEARRRWLSGSLTTAAALLFAVVGYWWQSPDRKPILTAGSDLTGVEVAREPA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHCCCC PPLMEMAARSYLLEDRAPEDAYAILLEREEISLPNER CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA