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The map label for this gene is ndhM

Identifier: 37521091

GI number: 37521091

Start: 1640525

End: 1640884

Strand: Direct

Name: ndhM

Synonym: glr1522

Alternate gene names: 37521091

Gene position: 1640525-1640884 (Clockwise)

Preceding gene: 37521088

Following gene: 37521092

Centisome position: 35.21

GC content: 57.5

Gene sequence:

>360_bases
ATGTTGAAGTCCACCACCCGCCACGTCCACATCTTTGCTGCCGACATCCGCAACGACAATTTCATCGCAAGCGACACCAA
GCTCACCCTCGATGTCGATCCGGACAACGAATTTATCTGGAACGACCCGGCGCTGCAAAAGGTTTACAGTGAGTTCGATC
GGCTGGTCGCCGCCTACACTGGCCTGGCCCTCACCGAGTACAACCTGCGTCGCATCGGTTCGGATCTTGAAAATTTTATC
CGCGGCCTTTTGCAGCAGGGCGAAATCGCCTACAACCTCGACAGCCGCGTACTCAACTTCAGCATGGGCCGTCCGCAGGT
CAGAGGCCCCGGCCAGATTGAAAACCGCCCCGGCCAATAG

Upstream 100 bases:

>100_bases
CCAGGGTATCCGCCCGCTTCCATCCCGGCACAGCGGGCACCGGGAGCCACAAAAGCCGGTGTTACAATCCAAGTTGAAAT
GCCCGAGCCAGGCGACGCCG

Downstream 100 bases:

>100_bases
CTTCACTCCCGGATCGGTATAGAATTTCCGGCTGCGGGAAATTTCAACCGACTCACGCCGCCTGACCGAATCCGCAAAAT
GCAGGAAGCGCGCCAAACCA

Product: hypothetical protein

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I subunit M; NDH-1 subunit M; NDH-M

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MLKSTTRHVHIFAADIRNDNFIASDTKLTLDVDPDNEFIWNDPALQKVYSEFDRLVAAYTGLALTEYNLRRIGSDLENFI
RGLLQQGEIAYNLDSRVLNFSMGRPQVRGPGQIENRPGQ

Sequences:

>Translated_119_residues
MLKSTTRHVHIFAADIRNDNFIASDTKLTLDVDPDNEFIWNDPALQKVYSEFDRLVAAYTGLALTEYNLRRIGSDLENFI
RGLLQQGEIAYNLDSRVLNFSMGRPQVRGPGQIENRPGQ
>Mature_119_residues
MLKSTTRHVHIFAADIRNDNFIASDTKLTLDVDPDNEFIWNDPALQKVYSEFDRLVAAYTGLALTEYNLRRIGSDLENFI
RGLLQQGEIAYNLDSRVLNFSMGRPQVRGPGQIENRPGQ

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhM subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDHM_GLOVI (Q7NKF6)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_924468.1
- GeneID:   2598596
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:glr1522
- NMPDR:   fig|251221.1.peg.1522
- HOGENOM:   HBG286965
- OMA:   NYSMGLP
- ProtClustDB:   CLSK893267
- BioCyc:   GVIO251221:GLR1522-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01352
- InterPro:   IPR018922

Pfam domain/function: PF10664 DUF2485

EC number: 1.6.5.3

Molecular weight: Translated: 13555; Mature: 13555

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSTTRHVHIFAADIRNDNFIASDTKLTLDVDPDNEFIWNDPALQKVYSEFDRLVAAYT
CCCCCCCEEEEEEEECCCCCEEECCCEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHH
GLALTEYNLRRIGSDLENFIRGLLQQGEIAYNLDSRVLNFSMGRPQVRGPGQIENRPGQ
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLKSTTRHVHIFAADIRNDNFIASDTKLTLDVDPDNEFIWNDPALQKVYSEFDRLVAAYT
CCCCCCCEEEEEEEECCCCCEEECCCEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHH
GLALTEYNLRRIGSDLENFIRGLLQQGEIAYNLDSRVLNFSMGRPQVRGPGQIENRPGQ
CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 14621292