Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
---|---|
Accession | NC_005125 |
Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is 37521088
Identifier: 37521088
GI number: 37521088
Start: 1637424
End: 1638065
Strand: Direct
Name: 37521088
Synonym: glr1519
Alternate gene names: NA
Gene position: 1637424-1638065 (Clockwise)
Preceding gene: 37521087
Following gene: 37521091
Centisome position: 35.15
GC content: 62.15
Gene sequence:
>642_bases TTGGGAGTAGAACTGCGCAGTTACGTCTACCTCGATAACCTGCAAGCGCAGTTCGCGGCTTTCCTGGGGACGATCGCACC GGGGTTTTTGCCGCTGCCTGGGGACGCTTCGCTGTGGATCGAGATTTCCCCGGGCATCGAGATTAACCGGATCACCGATA TCGCCCTCAAAGCCGCCGTCGTGCGGCCGGGGCTGCAGGTGGTCGAGCGGCTGTTCGGTAGCCTTGAAATTCACTCCAAC CGCCAGGGGGAGACCAAGACTGCCGGTCAGGCGATTCTTGAGTACCTCGGAGTGCGCGAGCGCGAGCGCCTCAAGCCGCG CGTCATTTCAAGCCAGATTATCCGCAACGTCGACCCGCACCAGACCCAGCTCATCAACCGCTTCAAGCGCGGTCAGATGA TCCTGGCGGGCCAGACATTGTTCGTGCTGGAGGTGGAACCCGCCGCCTACATTGCCCTCGCCGCCAACGAAGCCGAAAAA GCCGCCAACATCAACATCCTGGAAGTGTTGCCCTTCGGCAGCTTCGGGCGGATGTACCTGGGGGGCGAGGAGCGCGACAT CATGGTCAGCTATTCCGCCTCCATCGCCGCGGTCGAAAATGTCTTCGGGCGCGAAGATCCGGCGGCCGGGCGCCGGGAAT AA
Upstream 100 bases:
>100_bases GGAGAGCCTGGCCTATTTGATGGTGGAACCTGTGGGATGATGGGGCAGTGCACGTCGGCCCAGAAGCGCTGCCGCGCCCG GAGCCGATGGAGAGGAAATT
Downstream 100 bases:
>100_bases ACACTACAAACGGCGCGATATCACTCAGTGCTCCCGAATAGGGCAAACCCGGCCGCTGCAGCGAGCGACCGGGCGATGTA CTCGAAGACGGCTACTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Bacterial Microcompartments Protein Family; Microcompartments Protein Family Protein
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MGVELRSYVYLDNLQAQFAAFLGTIAPGFLPLPGDASLWIEISPGIEINRITDIALKAAVVRPGLQVVERLFGSLEIHSN RQGETKTAGQAILEYLGVRERERLKPRVISSQIIRNVDPHQTQLINRFKRGQMILAGQTLFVLEVEPAAYIALAANEAEK AANINILEVLPFGSFGRMYLGGEERDIMVSYSASIAAVENVFGREDPAAGRRE
Sequences:
>Translated_213_residues MGVELRSYVYLDNLQAQFAAFLGTIAPGFLPLPGDASLWIEISPGIEINRITDIALKAAVVRPGLQVVERLFGSLEIHSN RQGETKTAGQAILEYLGVRERERLKPRVISSQIIRNVDPHQTQLINRFKRGQMILAGQTLFVLEVEPAAYIALAANEAEK AANINILEVLPFGSFGRMYLGGEERDIMVSYSASIAAVENVFGREDPAAGRRE >Mature_212_residues GVELRSYVYLDNLQAQFAAFLGTIAPGFLPLPGDASLWIEISPGIEINRITDIALKAAVVRPGLQVVERLFGSLEIHSNR QGETKTAGQAILEYLGVRERERLKPRVISSQIIRNVDPHQTQLINRFKRGQMILAGQTLFVLEVEPAAYIALAANEAEKA ANINILEVLPFGSFGRMYLGGEERDIMVSYSASIAAVENVFGREDPAAGRRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23450; Mature: 23319
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVELRSYVYLDNLQAQFAAFLGTIAPGFLPLPGDASLWIEISPGIEINRITDIALKAAV CCCCEEHEEEEHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCEEEEHHHHHHHHHHH VRPGLQVVERLFGSLEIHSNRQGETKTAGQAILEYLGVRERERLKPRVISSQIIRNVDPH HCCCHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCHH QTQLINRFKRGQMILAGQTLFVLEVEPAAYIALAANEAEKAANINILEVLPFGSFGRMYL HHHHHHHHHCCCEEEECCEEEEEEECCCEEEEEECCCHHHHCCCEEEEEECCCCCCCEEE GGEERDIMVSYSASIAAVENVFGREDPAAGRRE CCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GVELRSYVYLDNLQAQFAAFLGTIAPGFLPLPGDASLWIEISPGIEINRITDIALKAAV CCCEEHEEEEHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCEEEEHHHHHHHHHHH VRPGLQVVERLFGSLEIHSNRQGETKTAGQAILEYLGVRERERLKPRVISSQIIRNVDPH HCCCHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHCCCHH QTQLINRFKRGQMILAGQTLFVLEVEPAAYIALAANEAEKAANINILEVLPFGSFGRMYL HHHHHHHHHCCCEEEECCEEEEEEECCCEEEEEECCCHHHHCCCEEEEEECCCCCCCEEE GGEERDIMVSYSASIAAVENVFGREDPAAGRRE CCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA