| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is btuB [H]
Identifier: 37521057
GI number: 37521057
Start: 1596824
End: 1599244
Strand: Direct
Name: btuB [H]
Synonym: glr1488
Alternate gene names: 37521057
Gene position: 1596824-1599244 (Clockwise)
Preceding gene: 37521056
Following gene: 37521060
Centisome position: 34.27
GC content: 65.43
Gene sequence:
>2421_bases GTGCGCTGGATCTGTTTTTCGTTATCTCTGAGCGCCGCCTGGGGACTCACCGCTGCCCCAACCCTCGCCCACACCGCCCA GGATTTGCGCGAAACGGCCAGCCTGAGTGCTATGGACCTGGCCGCTCCACTCCCGGAGGCCGCCCTCGCCCAGGCCGGTG AACCGCAAAGCGCCCCCCCCGAGGCGGACTTGCTCGATGAGGTGACGGTGAGCGCCACCCGCCGCCCGACCCGCGAGCGC GACACCACCGCCACCACCTACACCGTCAAGCGTGAGGACTTCCAGGCCCTGGGGGCCAGGACGGTCCCGGACGCCCTGGC CCTCATTCCCGCCTTCGAGACCCAACCGGCCCTGGGCGGGGTGCGCAACGCCCGGGGTCTGTTTTTGCGCGGTTTCGACG ACGCCCGCTTCCAGGTGCTCAAGGACGGCCTGTCGCTCACCCGGCCCTCCAACGGCCGCAACGATCTTTCGCGCCTCCCG CTGGCGGACATCGAGCGCATCGAAGTCCTCACCGGCGGCGCCACGCTGCGCTACGGCGCCGGGGCGGTGGGAGGGGTGAT TAATCTGATCACCGAGACGCCCGCAGGAGCGCCCAAGCTTACCCTGGCCTACGAAGCGGGCTCCTACGGCAACAGCACCG CCACCGCCAAATACGGCGGCGGCGACAGCACCTTCAATTACCTGTTCACTTACACCGGCCTGGTCGCCTTCAACAACTAC CCGTTTCGCTTCACCCTGCCCAACACGGCCCTGTTCTATGGTCCCGAAGCGATCACCCCCGACGGCACCAGCCTCTTTGG CTTTTTGCGCCCCGAAGTCGGTCCGCCGCTCACGCTCACCGGTGTGGCCGATTCGGCCTTTAACGCGAGCGACACCTACA CCGGCAAACTGGTCTGGCGGCCCTCCGCCGAACATCGCCTCACCCTGCGCGCCAGCCACCAGAACAGCAAAAACGCCGGC AACGGCCCCGGTCTCTACGCCGCAGGCGCCTGCTTCGGCGGACCCGGCAGCGGCAACGCCACCCTCGAAAGTCAAACCCG CTTCCTTCCCCTCGATGCGGCTGGCCGGGAGTTGTCCTGCGACACCCAGCGCTATCTGGTGAGTACCCCGAGTGCCGCCG TCGCCATCCCCTACGCCTTCAAGCGCTCTGCGGACGGCACGGTCACCTTTGCACCCGGCCAATCCTACCCGGCCGCCGAG AGCGCCATCGGCACCATCGACTTTTACATCACCACCTTCCAGTCGCAGACTGAGACGGCCTTTTTCTGGGACTACGACTT GAGCCCAACCGCATCGATCAACAGCTACGCCGCCTACTACCGTTTCACTAGCCCCCGCACCCGCCCCGCCCGCTTCGCGG TGAACACCGACGTGCTCGGGGGCGAGACGGCCTTTGCCCTGGGCCAGTTGGGATCGCCCTTTACCGAGGACAGCAAACTG GAACTACAAAGCGCCCTCAACACCCAAATTTCCCCCGGCCAGACCCTTTCTTTTGGGGTGAATTTCATCGAGGACCGCTC GTTTCAGCAGCAACAGCGCGGCAGCACCTTTGTGGACCGGGCGATTGCGCGCACATCGCTGTTTTTGATCGACGACATCC GCTTTGGCGACCAGCTCGCGGCCAATCTGGGAGTGCGCTACACCGATTCGACCCAGTTCGGCGCGGTGCTCACCCCGGCA GCGGGCATCCGCTTCAGCCCCAGCCGCGCCTTTTCGCTCAGGGCCAACTGGTCGCAGGTCTTCAACGCCCCGAACATCTC GGATCTCTACACCGCCGGGGGCGTCTTTGTTCCCAACCCGGACCTCAGGCCCGAGACCGGCATCACCTACGATCTGGGCT TCGACTTCACGCCCGCGTCCAACCTGGGCTTGCGCTTCACCTACTTCAACACCACCCTGGACGGGGCAATCGCCACGGTC TTTTTTCGCAACCCCGACTCCGGCGATCCCAATCTGTTTTTGCAGCAGCAGCGCAACCTCGACACCCGCTACGCCTCGGG TCTCGAAGTGGTGGGCGACTGGCAAGTTGCCGACCAGTGGCGTCTGCGTCTCACCTGGACCAATACCGACGCGCGCTTCG TCGGAGCAGTCGATTCGAACGACACGCGCCTGTTTTTTGCCCAGTATCAAGATCCGAACATCCCCTTCAACCGGGTGGCC CTCGCCGCCACCTACGCCCACCGCGGCTGGAGCGCGACGCTGTTGGGCCGCTATGCAGGCGGACGCCGCCGGGGCGAGGA TCCTTTCGGCGTACCGGCCTACGCGAGCGTGGATCTTAACTTCGAGCTCCCGGTCGCCCCCCGATTCACCCTCACCGGCA ATCTGTTCAATCTCACCGATACCCAGTACGAATACGCCGCCGGTATCCCGGCCCCCGGATTCACCTTCCGCCTGGGCGGG CGTGTTGAGTTGGGCGGTTAA
Upstream 100 bases:
>100_bases CCCGGCTTTACCGGCAGCGTCGCCGTCGAGATCTGGCGCTGAGGGTCCGCTGCACCTGCCGCTCAAGCCACAATGGTCGG GGCGTCGCGGAGCAACACCT
Downstream 100 bases:
>100_bases TCAACTTATTTCATACACACAGCCATTTACAAAATGAATTTCTCAATATTCTCATGATTGCCATTGTTTGAATTCTGTAC GTAGCTCTTGAAGTAGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MRWICFSLSLSAAWGLTAAPTLAHTAQDLRETASLSAMDLAAPLPEAALAQAGEPQSAPPEADLLDEVTVSATRRPTRER DTTATTYTVKREDFQALGARTVPDALALIPAFETQPALGGVRNARGLFLRGFDDARFQVLKDGLSLTRPSNGRNDLSRLP LADIERIEVLTGGATLRYGAGAVGGVINLITETPAGAPKLTLAYEAGSYGNSTATAKYGGGDSTFNYLFTYTGLVAFNNY PFRFTLPNTALFYGPEAITPDGTSLFGFLRPEVGPPLTLTGVADSAFNASDTYTGKLVWRPSAEHRLTLRASHQNSKNAG NGPGLYAAGACFGGPGSGNATLESQTRFLPLDAAGRELSCDTQRYLVSTPSAAVAIPYAFKRSADGTVTFAPGQSYPAAE SAIGTIDFYITTFQSQTETAFFWDYDLSPTASINSYAAYYRFTSPRTRPARFAVNTDVLGGETAFALGQLGSPFTEDSKL ELQSALNTQISPGQTLSFGVNFIEDRSFQQQQRGSTFVDRAIARTSLFLIDDIRFGDQLAANLGVRYTDSTQFGAVLTPA AGIRFSPSRAFSLRANWSQVFNAPNISDLYTAGGVFVPNPDLRPETGITYDLGFDFTPASNLGLRFTYFNTTLDGAIATV FFRNPDSGDPNLFLQQQRNLDTRYASGLEVVGDWQVADQWRLRLTWTNTDARFVGAVDSNDTRLFFAQYQDPNIPFNRVA LAATYAHRGWSATLLGRYAGGRRRGEDPFGVPAYASVDLNFELPVAPRFTLTGNLFNLTDTQYEYAAGIPAPGFTFRLGG RVELGG
Sequences:
>Translated_806_residues MRWICFSLSLSAAWGLTAAPTLAHTAQDLRETASLSAMDLAAPLPEAALAQAGEPQSAPPEADLLDEVTVSATRRPTRER DTTATTYTVKREDFQALGARTVPDALALIPAFETQPALGGVRNARGLFLRGFDDARFQVLKDGLSLTRPSNGRNDLSRLP LADIERIEVLTGGATLRYGAGAVGGVINLITETPAGAPKLTLAYEAGSYGNSTATAKYGGGDSTFNYLFTYTGLVAFNNY PFRFTLPNTALFYGPEAITPDGTSLFGFLRPEVGPPLTLTGVADSAFNASDTYTGKLVWRPSAEHRLTLRASHQNSKNAG NGPGLYAAGACFGGPGSGNATLESQTRFLPLDAAGRELSCDTQRYLVSTPSAAVAIPYAFKRSADGTVTFAPGQSYPAAE SAIGTIDFYITTFQSQTETAFFWDYDLSPTASINSYAAYYRFTSPRTRPARFAVNTDVLGGETAFALGQLGSPFTEDSKL ELQSALNTQISPGQTLSFGVNFIEDRSFQQQQRGSTFVDRAIARTSLFLIDDIRFGDQLAANLGVRYTDSTQFGAVLTPA AGIRFSPSRAFSLRANWSQVFNAPNISDLYTAGGVFVPNPDLRPETGITYDLGFDFTPASNLGLRFTYFNTTLDGAIATV FFRNPDSGDPNLFLQQQRNLDTRYASGLEVVGDWQVADQWRLRLTWTNTDARFVGAVDSNDTRLFFAQYQDPNIPFNRVA LAATYAHRGWSATLLGRYAGGRRRGEDPFGVPAYASVDLNFELPVAPRFTLTGNLFNLTDTQYEYAAGIPAPGFTFRLGG RVELGG >Mature_806_residues MRWICFSLSLSAAWGLTAAPTLAHTAQDLRETASLSAMDLAAPLPEAALAQAGEPQSAPPEADLLDEVTVSATRRPTRER DTTATTYTVKREDFQALGARTVPDALALIPAFETQPALGGVRNARGLFLRGFDDARFQVLKDGLSLTRPSNGRNDLSRLP LADIERIEVLTGGATLRYGAGAVGGVINLITETPAGAPKLTLAYEAGSYGNSTATAKYGGGDSTFNYLFTYTGLVAFNNY PFRFTLPNTALFYGPEAITPDGTSLFGFLRPEVGPPLTLTGVADSAFNASDTYTGKLVWRPSAEHRLTLRASHQNSKNAG NGPGLYAAGACFGGPGSGNATLESQTRFLPLDAAGRELSCDTQRYLVSTPSAAVAIPYAFKRSADGTVTFAPGQSYPAAE SAIGTIDFYITTFQSQTETAFFWDYDLSPTASINSYAAYYRFTSPRTRPARFAVNTDVLGGETAFALGQLGSPFTEDSKL ELQSALNTQISPGQTLSFGVNFIEDRSFQQQQRGSTFVDRAIARTSLFLIDDIRFGDQLAANLGVRYTDSTQFGAVLTPA AGIRFSPSRAFSLRANWSQVFNAPNISDLYTAGGVFVPNPDLRPETGITYDLGFDFTPASNLGLRFTYFNTTLDGAIATV FFRNPDSGDPNLFLQQQRNLDTRYASGLEVVGDWQVADQWRLRLTWTNTDARFVGAVDSNDTRLFFAQYQDPNIPFNRVA LAATYAHRGWSATLLGRYAGGRRRGEDPFGVPAYASVDLNFELPVAPRFTLTGNLFNLTDTQYEYAAGIPAPGFTFRLGG RVELGG
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790405, Length=160, Percent_Identity=29.375, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010916 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 87000; Mature: 87000
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWICFSLSLSAAWGLTAAPTLAHTAQDLRETASLSAMDLAAPLPEAALAQAGEPQSAPP CEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHCCCCCCCCCC EADLLDEVTVSATRRPTRERDTTATTYTVKREDFQALGARTVPDALALIPAFETQPALGG CCHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCHHHEEECCCCCCCCCC VRNARGLFLRGFDDARFQVLKDGLSLTRPSNGRNDLSRLPLADIERIEVLTGGATLRYGA CCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCEEEECC GAVGGVINLITETPAGAPKLTLAYEAGSYGNSTATAKYGGGDSTFNYLFTYTGLVAFNNY CHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEEEEEEEEECCC PFRFTLPNTALFYGPEAITPDGTSLFGFLRPEVGPPLTLTGVADSAFNASDTYTGKLVWR CEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEEC PSAEHRLTLRASHQNSKNAGNGPGLYAAGACFGGPGSGNATLESQTRFLPLDAAGRELSC CCCCCEEEEEECCCCCCCCCCCCCEEEECEEECCCCCCCCEECCCCEEEEECCCCCCCCC DTQRYLVSTPSAAVAIPYAFKRSADGTVTFAPGQSYPAAESAIGTIDFYITTFQSQTETA CCCEEEEECCCCEEEECCHHCCCCCCEEEECCCCCCCCHHHCCEEEEEEEEEECCCCCEE FFWDYDLSPTASINSYAAYYRFTSPRTRPARFAVNTDVLGGETAFALGQLGSPFTEDSKL EEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCHH ELQSALNTQISPGQTLSFGVNFIEDRSFQQQQRGSTFVDRAIARTSLFLIDDIRFGDQLA HHHHHHCCCCCCCCEEEECCEEHHCCCHHHHHCCCHHHHHHHHHEEEEEEECCCCCCHHH ANLGVRYTDSTQFGAVLTPAAGIRFSPSRAFSLRANWSQVFNAPNISDLYTAGGVFVPNP HHCCEEEECCCCCCEEECCCCCCEECCCCEEEEECCHHHHCCCCCCHHHHCCCCEECCCC DLRPETGITYDLGFDFTPASNLGLRFTYFNTTLDGAIATVFFRNPDSGDPNLFLQQQRNL CCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEHHCCC DTRYASGLEVVGDWQVADQWRLRLTWTNTDARFVGAVDSNDTRLFFAQYQDPNIPFNRVA CHHHHCCCEEEECEEECCEEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCHHHEE LAATYAHRGWSATLLGRYAGGRRRGEDPFGVPAYASVDLNFELPVAPRFTLTGNLFNLTD EEEEHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEECCEEECCC TQYEYAAGIPAPGFTFRLGGRVELGG CCCCEECCCCCCCEEEEECCEEEECC >Mature Secondary Structure MRWICFSLSLSAAWGLTAAPTLAHTAQDLRETASLSAMDLAAPLPEAALAQAGEPQSAPP CEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHCCCCCCCCCC EADLLDEVTVSATRRPTRERDTTATTYTVKREDFQALGARTVPDALALIPAFETQPALGG CCHHHHHHHHHHCCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCHHHEEECCCCCCCCCC VRNARGLFLRGFDDARFQVLKDGLSLTRPSNGRNDLSRLPLADIERIEVLTGGATLRYGA CCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCCEEEECC GAVGGVINLITETPAGAPKLTLAYEAGSYGNSTATAKYGGGDSTFNYLFTYTGLVAFNNY CHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCEEEEEEEEEEEEECCC PFRFTLPNTALFYGPEAITPDGTSLFGFLRPEVGPPLTLTGVADSAFNASDTYTGKLVWR CEEEECCCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEEEEEC PSAEHRLTLRASHQNSKNAGNGPGLYAAGACFGGPGSGNATLESQTRFLPLDAAGRELSC CCCCCEEEEEECCCCCCCCCCCCCEEEECEEECCCCCCCCEECCCCEEEEECCCCCCCCC DTQRYLVSTPSAAVAIPYAFKRSADGTVTFAPGQSYPAAESAIGTIDFYITTFQSQTETA CCCEEEEECCCCEEEECCHHCCCCCCEEEECCCCCCCCHHHCCEEEEEEEEEECCCCCEE FFWDYDLSPTASINSYAAYYRFTSPRTRPARFAVNTDVLGGETAFALGQLGSPFTEDSKL EEEECCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCHH ELQSALNTQISPGQTLSFGVNFIEDRSFQQQQRGSTFVDRAIARTSLFLIDDIRFGDQLA HHHHHHCCCCCCCCEEEECCEEHHCCCHHHHHCCCHHHHHHHHHEEEEEEECCCCCCHHH ANLGVRYTDSTQFGAVLTPAAGIRFSPSRAFSLRANWSQVFNAPNISDLYTAGGVFVPNP HHCCEEEECCCCCCEEECCCCCCEECCCCEEEEECCHHHHCCCCCCHHHHCCCCEECCCC DLRPETGITYDLGFDFTPASNLGLRFTYFNTTLDGAIATVFFRNPDSGDPNLFLQQQRNL CCCCCCCCEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEHHCCC DTRYASGLEVVGDWQVADQWRLRLTWTNTDARFVGAVDSNDTRLFFAQYQDPNIPFNRVA CHHHHCCCEEEECEEECCEEEEEEEEECCCCEEEEEECCCCCEEEEEEECCCCCCHHHEE LAATYAHRGWSATLLGRYAGGRRRGEDPFGVPAYASVDLNFELPVAPRFTLTGNLFNLTD EEEEHHCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCEEEECCEEECCC TQYEYAAGIPAPGFTFRLGGRVELGG CCCCEECCCCCCCEEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA