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The map label for this gene is ykgJ [C]

Identifier: 34498305

GI number: 34498305

Start: 3105668

End: 3106039

Strand: Reverse

Name: ykgJ [C]

Synonym: CV_2850

Alternate gene names: 34498305

Gene position: 3106039-3105668 (Counterclockwise)

Preceding gene: 34498306

Following gene: 34498298

Centisome position: 65.38

GC content: 70.16

Gene sequence:

>372_bases
TTGCTTGCCATGAGTGAAAAAAGCAATCCCTGCCAATCCTGCGGCGCGTGCTGCGCCAGCTTCCGCGTTTCTTTCTACTG
GGCCGAGGCCGATGACGGCGGCGGCCTGGTGCCCGGCCATCTTACCGAAAAACTCAACGACTGGACCCGCTGCATGCGCG
GCACCTGGTCCACCAGCCCGCGCTGCGTCGCCTTGCGGGGCGAAGTGGGCGGCAGCGTCGGCTGCGGCGTCTATCCGCTG
CGGCCCAGTCCCTGCCGCGAAGTGGAGGCCGGTTCGGCGCAGTGCCTGAAGGCGCGCGCCAGCCACGGCCTGCCCGCGCT
GTGGGAAGCGCCGGTCGCGGCCAACGAGGCCGAGCCGCTGCTGGCCGGCTAG

Upstream 100 bases:

>100_bases
GCGGCAAGATAGTTTTACTTGAGGGCGGCAGGCAGGTCTGACAAAATACCCGGATCGCATTTTTTCGCCCATCCCGGGCG
CGATCCGCAACCTGTTTTTC

Downstream 100 bases:

>100_bases
GCCAGGCTAAGGTCGAAGAAAACTTTCAGCCTGGCCGCCGCGGCGGCCACGCAGGGCTCGCGGTCGTACAGGTCGAAGTG
CGAGGCCCAGGCGATCAGGC

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MLAMSEKSNPCQSCGACCASFRVSFYWAEADDGGGLVPGHLTEKLNDWTRCMRGTWSTSPRCVALRGEVGGSVGCGVYPL
RPSPCREVEAGSAQCLKARASHGLPALWEAPVAANEAEPLLAG

Sequences:

>Translated_123_residues
MLAMSEKSNPCQSCGACCASFRVSFYWAEADDGGGLVPGHLTEKLNDWTRCMRGTWSTSPRCVALRGEVGGSVGCGVYPL
RPSPCREVEAGSAQCLKARASHGLPALWEAPVAANEAEPLLAG
>Mature_123_residues
MLAMSEKSNPCQSCGACCASFRVSFYWAEADDGGGLVPGHLTEKLNDWTRCMRGTWSTSPRCVALRGEVGGSVGCGVYPL
RPSPCREVEAGSAQCLKARASHGLPALWEAPVAANEAEPLLAG

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ykgJ [H]

Homologues:

Organism=Escherichia coli, GI2367105, Length=105, Percent_Identity=52.3809523809524, Blast_Score=108, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 12930; Mature: 12930

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
7.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAMSEKSNPCQSCGACCASFRVSFYWAEADDGGGLVPGHLTEKLNDWTRCMRGTWSTSP
CCCCCCCCCHHHHHHHHHHHCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
RCVALRGEVGGSVGCGVYPLRPSPCREVEAGSAQCLKARASHGLPALWEAPVAANEAEPL
CEEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LAG
CCC
>Mature Secondary Structure
MLAMSEKSNPCQSCGACCASFRVSFYWAEADDGGGLVPGHLTEKLNDWTRCMRGTWSTSP
CCCCCCCCCHHHHHHHHHHHCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
RCVALRGEVGGSVGCGVYPLRPSPCREVEAGSAQCLKARASHGLPALWEAPVAANEAEPL
CEEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
LAG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA