| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498246
Identifier: 34498246
GI number: 34498246
Start: 3025897
End: 3026511
Strand: Reverse
Name: 34498246
Synonym: CV_2791
Alternate gene names: NA
Gene position: 3026511-3025897 (Counterclockwise)
Preceding gene: 34498248
Following gene: 34498243
Centisome position: 63.7
GC content: 58.05
Gene sequence:
>615_bases ATGGATGCTGTGTTCTTCGATTTCGATGGCGTGTTGACCACCGATAAATACGGTTCCGACACCACCAATCGTTATCTGGG CGAAGCCACCGGGCTTGGATTTGATAGGATCGACCAAGCGCTGGAGCGTTACAACGACGACTTGTTGCTGGGCAGGCTGG GGCACCCTGATGTCTGGTCTGCGCTATGCTGCGAATTGGGTCTGGAAATGGATTACAACTTGCTTGATGCGGCTTTCCGC AGCACGCCGATGAACGAAGGGGTACTGGCGCTGGCGAGAAGGCTGCAGGGGCGTTTCCGGCTGGGCATTATTACGGACAA TAAATCGGACCGAATGGACTGTTTGCGCGCGATGCACGAACTGGACGCGTTGTTCGATCCCATCGTGGTATCGGCTGCGG TGGGTGCGAACAAGTCTGGAGGGGAAATTTTCCAACATGCGTTGGCGTTGTGCGGGCTGCGGCCGGAGCGGAGCCTGTTC ATCGATAACAGCCGGCGCAATCTGGAAGTGGCGGCGGGCTTGGGGATGGCGACGCTCTTCCACGACGATGTCCGCAACGA CGTGCTTGCGCTGCGCCAAGCGCTTGAGCGCATATTGGGCATCAGCCTGGCCTAA
Upstream 100 bases:
>100_bases ATGAGTGTCAGGATGCGGAGCCTTCGCGGCGGCGAGGCGTTCTTGACCGGGCGCGAACGCGCAATGCTTGATGGGCGATG TTTTGCAAGGATGTTATTTA
Downstream 100 bases:
>100_bases ACGATTGGGCAAAACAAAACCCGCCGGATTCGGCGGGTTTCGTACTTGCGAAGCGGGCGTTTACGGACGCTCGACCGCCA GCGCCACGCCCATGCCGCCG
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: HAD Family Hydrolase
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MDAVFFDFDGVLTTDKYGSDTTNRYLGEATGLGFDRIDQALERYNDDLLLGRLGHPDVWSALCCELGLEMDYNLLDAAFR STPMNEGVLALARRLQGRFRLGIITDNKSDRMDCLRAMHELDALFDPIVVSAAVGANKSGGEIFQHALALCGLRPERSLF IDNSRRNLEVAAGLGMATLFHDDVRNDVLALRQALERILGISLA
Sequences:
>Translated_204_residues MDAVFFDFDGVLTTDKYGSDTTNRYLGEATGLGFDRIDQALERYNDDLLLGRLGHPDVWSALCCELGLEMDYNLLDAAFR STPMNEGVLALARRLQGRFRLGIITDNKSDRMDCLRAMHELDALFDPIVVSAAVGANKSGGEIFQHALALCGLRPERSLF IDNSRRNLEVAAGLGMATLFHDDVRNDVLALRQALERILGISLA >Mature_204_residues MDAVFFDFDGVLTTDKYGSDTTNRYLGEATGLGFDRIDQALERYNDDLLLGRLGHPDVWSALCCELGLEMDYNLLDAAFR STPMNEGVLALARRLQGRFRLGIITDNKSDRMDCLRAMHELDALFDPIVVSAAVGANKSGGEIFQHALALCGLRPERSLF IDNSRRNLEVAAGLGMATLFHDDVRNDVLALRQALERILGISLA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22539; Mature: 22539
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVFFDFDGVLTTDKYGSDTTNRYLGEATGLGFDRIDQALERYNDDLLLGRLGHPDVWS CCCEEEECCCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCHHHH ALCCELGLEMDYNLLDAAFRSTPMNEGVLALARRLQGRFRLGIITDNKSDRMDCLRAMHE HHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH LDALFDPIVVSAAVGANKSGGEIFQHALALCGLRPERSLFIDNSRRNLEVAAGLGMATLF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEHHHCCCHHHHH HDDVRNDVLALRQALERILGISLA HHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDAVFFDFDGVLTTDKYGSDTTNRYLGEATGLGFDRIDQALERYNDDLLLGRLGHPDVWS CCCEEEECCCEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCHHHH ALCCELGLEMDYNLLDAAFRSTPMNEGVLALARRLQGRFRLGIITDNKSDRMDCLRAMHE HHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHH LDALFDPIVVSAAVGANKSGGEIFQHALALCGLRPERSLFIDNSRRNLEVAAGLGMATLF HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEHHHCCCHHHHH HDDVRNDVLALRQALERILGISLA HHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA