| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498208
Identifier: 34498208
GI number: 34498208
Start: 2988730
End: 2990259
Strand: Reverse
Name: 34498208
Synonym: CV_2753
Alternate gene names: NA
Gene position: 2990259-2988730 (Counterclockwise)
Preceding gene: 34498211
Following gene: 34498207
Centisome position: 62.94
GC content: 67.71
Gene sequence:
>1530_bases ATGAAGCGAACCTTGTTGGCGATGGCCCTGGCGCTGGCCGGTTTGATGCCGCTCGCGCATGCGGATGTCAGCGACGGCCA CGCTTTGCCGCCGGGCATCAGCTGGCAGCAGGGCGATGTGCCGGCGGCGTTCGCCCGCGCGAAGGCGGAGAACAAGCCGG TGTTCCTGTACTGGGGCGCGGTATGGTGCCCGCCATGCAACCAGGTGAAGTCCACCATCTTCAATCGTCCGGACTTCATC GCCGCCACCCGCCAGTTCGTGCCGGTTTACCTGGACGGCGACAGCGAGAATGCGCAGCAGCTGGGCGAAAAATTCAAGGT GCGAGGCTACCCGACCATGATCCTGTTCCGTCCGGACGGCGCCGAGATCACCCGCCTGCCGGGCGAGGTGGATCCGGAAC GTTACCTGCGCACGCTGCAGCTGGGACTGACCGCGGTGAAGCCGGTCAAGGCGCTGTTGTCCGACGCCTTGGCCGGCAAC ACGCTGGCGGCGGCCGACTGGCAGTTGCTGGCCGATTACGCCTGGGATGTGGACCGCGGCCAGCTGTTGCCGGAGAAGGA CGTGCCCGCCACCCTGGCGCAATTGGCGGAGCGTGTGCCAGCCGAGCCGGCCGCGGTCGCGACCCGGTTGCAACTGAAGG CGCTGGCCGCCCAGGCAGGAGAGAAGGCGCCGCCGGCGTTCGACAAGCGCCAGGCGCGCGGGCGCCTGTTGCGGGTATTG GCCGATGACAAGCTGAGCCGCGCCAACGCCGACGTGGTCATTTACGCCGCAAGCGACGCGCTGAAGCTGCTGGGCGACGA CGCGGCGCTGCGCCAGGCTTTCGACGCCCAGCTGAAGAAGCTGGAGGCCGATTCGACCTTGTCCTGGAGCGACAGGCTGG GCGCGGCCTCCACGCTGCTGTCCCTGTACAAGCAGCAGCATCCCAAGCAGCCGTTGCCGGCCGGGTTGGTGGCCGACGTG AAAGCCAAGGCGGCGGAGGCCGACAAGGCCAGCGCCAACCCTTATCAGCGCCAGGCGGTGATCACCGCCGCCGGCGAGCT GCTGTCCGACGCCGGCCTGCTGGACGAATCCGACACCCTGCTGAAGGGCGAGCTGAAAACCTCGCACGCCCCGTATTACC ATATGCTGATCCTGGCCTCCAACGCCAAGGAGCGCGGCGACAAGGCCGCCGCGCTGGACTGGTACCAGAAGGCCTACCAG GCGTCGGAAGGGCAGGCTACCCGCTTGCAGTGGGGCGCTAGCTACGTCAGCAACGCGGTGGAGCTGGCGCCGCAGGACGC TGGCCGGATCGAGCTTGCGGCCAGCGAGGTGTTCGCCGACGCGGGCAAGTCGGGCAGCGCCTTCTACGAACGCAGCCGCC GCTCGCTGGAAAAGGTGGCCGGCCGGCTCAAGACCTGGAACCAGGACGGCAAGCACGCGGACGCCGTCGGCAGGCTGGCC GGTCAACTGAATGGCGTATGCGAGAAGCTGTCTGCCGAGGATGCGCAGAAACCGGTGTGCGACGGCCTGGTGAAGGAACT GAAGTCTTGA
Upstream 100 bases:
>100_bases GCAGCGGCGCTGCTAAGCAAATCGCCAGCCTGTCTTTATGCTTCGTGAATATTCGGTGTAGCATGGAGCCACGCATACAA AGACAGAAAGAGGCAGAGAC
Downstream 100 bases:
>100_bases TCGGCTCGGCCTGATCGAGACCCGCCCGCCCGCCAGCCCGGCGCGGCGGGTCTCGCCGTTTTCAGCCGGCCGGCAGGGTG CAGCGGCACCAGCGCTTCGC
Product: disulphide-isomerase
Products: NA
Alternate protein names: Disulphide-Isomerase; Disulphide-Isomerase Oxidoreductase Protein; Thiol-Disulfide Isomerase And Thioredoxin; Lipoprotein
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MKRTLLAMALALAGLMPLAHADVSDGHALPPGISWQQGDVPAAFARAKAENKPVFLYWGAVWCPPCNQVKSTIFNRPDFI AATRQFVPVYLDGDSENAQQLGEKFKVRGYPTMILFRPDGAEITRLPGEVDPERYLRTLQLGLTAVKPVKALLSDALAGN TLAAADWQLLADYAWDVDRGQLLPEKDVPATLAQLAERVPAEPAAVATRLQLKALAAQAGEKAPPAFDKRQARGRLLRVL ADDKLSRANADVVIYAASDALKLLGDDAALRQAFDAQLKKLEADSTLSWSDRLGAASTLLSLYKQQHPKQPLPAGLVADV KAKAAEADKASANPYQRQAVITAAGELLSDAGLLDESDTLLKGELKTSHAPYYHMLILASNAKERGDKAAALDWYQKAYQ ASEGQATRLQWGASYVSNAVELAPQDAGRIELAASEVFADAGKSGSAFYERSRRSLEKVAGRLKTWNQDGKHADAVGRLA GQLNGVCEKLSAEDAQKPVCDGLVKELKS
Sequences:
>Translated_509_residues MKRTLLAMALALAGLMPLAHADVSDGHALPPGISWQQGDVPAAFARAKAENKPVFLYWGAVWCPPCNQVKSTIFNRPDFI AATRQFVPVYLDGDSENAQQLGEKFKVRGYPTMILFRPDGAEITRLPGEVDPERYLRTLQLGLTAVKPVKALLSDALAGN TLAAADWQLLADYAWDVDRGQLLPEKDVPATLAQLAERVPAEPAAVATRLQLKALAAQAGEKAPPAFDKRQARGRLLRVL ADDKLSRANADVVIYAASDALKLLGDDAALRQAFDAQLKKLEADSTLSWSDRLGAASTLLSLYKQQHPKQPLPAGLVADV KAKAAEADKASANPYQRQAVITAAGELLSDAGLLDESDTLLKGELKTSHAPYYHMLILASNAKERGDKAAALDWYQKAYQ ASEGQATRLQWGASYVSNAVELAPQDAGRIELAASEVFADAGKSGSAFYERSRRSLEKVAGRLKTWNQDGKHADAVGRLA GQLNGVCEKLSAEDAQKPVCDGLVKELKS >Mature_509_residues MKRTLLAMALALAGLMPLAHADVSDGHALPPGISWQQGDVPAAFARAKAENKPVFLYWGAVWCPPCNQVKSTIFNRPDFI AATRQFVPVYLDGDSENAQQLGEKFKVRGYPTMILFRPDGAEITRLPGEVDPERYLRTLQLGLTAVKPVKALLSDALAGN TLAAADWQLLADYAWDVDRGQLLPEKDVPATLAQLAERVPAEPAAVATRLQLKALAAQAGEKAPPAFDKRQARGRLLRVL ADDKLSRANADVVIYAASDALKLLGDDAALRQAFDAQLKKLEADSTLSWSDRLGAASTLLSLYKQQHPKQPLPAGLVADV KAKAAEADKASANPYQRQAVITAAGELLSDAGLLDESDTLLKGELKTSHAPYYHMLILASNAKERGDKAAALDWYQKAYQ ASEGQATRLQWGASYVSNAVELAPQDAGRIELAASEVFADAGKSGSAFYERSRRSLEKVAGRLKTWNQDGKHADAVGRLA GQLNGVCEKLSAEDAQKPVCDGLVKELKS
Specific function: Unknown
COG id: COG4232
COG function: function code OC; Thiol:disulfide interchange protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54812; Mature: 54812
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRTLLAMALALAGLMPLAHADVSDGHALPPGISWQQGDVPAAFARAKAENKPVFLYWGA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECC VWCPPCNQVKSTIFNRPDFIAATRQFVPVYLDGDSENAQQLGEKFKVRGYPTMILFRPDG EECCCHHHHHHHHCCCCCHHHHHCCEEEEEECCCCHHHHHHHHHHEECCCCEEEEECCCC AEITRLPGEVDPERYLRTLQLGLTAVKPVKALLSDALAGNTLAAADWQLLADYAWDVDRG CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCC QLLPEKDVPATLAQLAERVPAEPAAVATRLQLKALAAQAGEKAPPAFDKRQARGRLLRVL CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ADDKLSRANADVVIYAASDALKLLGDDAALRQAFDAQLKKLEADSTLSWSDRLGAASTLL HHHHHHCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH SLYKQQHPKQPLPAGLVADVKAKAAEADKASANPYQRQAVITAAGELLSDAGLLDESDTL HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE LKGELKTSHAPYYHMLILASNAKERGDKAAALDWYQKAYQASEGQATRLQWGASYVSNAV EECCCCCCCCCEEEEEEEECCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ELAPQDAGRIELAASEVFADAGKSGSAFYERSRRSLEKVAGRLKTWNQDGKHADAVGRLA HHCCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH GQLNGVCEKLSAEDAQKPVCDGLVKELKS HHHHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MKRTLLAMALALAGLMPLAHADVSDGHALPPGISWQQGDVPAAFARAKAENKPVFLYWGA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECC VWCPPCNQVKSTIFNRPDFIAATRQFVPVYLDGDSENAQQLGEKFKVRGYPTMILFRPDG EECCCHHHHHHHHCCCCCHHHHHCCEEEEEECCCCHHHHHHHHHHEECCCCEEEEECCCC AEITRLPGEVDPERYLRTLQLGLTAVKPVKALLSDALAGNTLAAADWQLLADYAWDVDRG CCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCC QLLPEKDVPATLAQLAERVPAEPAAVATRLQLKALAAQAGEKAPPAFDKRQARGRLLRVL CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ADDKLSRANADVVIYAASDALKLLGDDAALRQAFDAQLKKLEADSTLSWSDRLGAASTLL HHHHHHCCCCCEEEEECCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH SLYKQQHPKQPLPAGLVADVKAKAAEADKASANPYQRQAVITAAGELLSDAGLLDESDTL HHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE LKGELKTSHAPYYHMLILASNAKERGDKAAALDWYQKAYQASEGQATRLQWGASYVSNAV EECCCCCCCCCEEEEEEEECCCHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ELAPQDAGRIELAASEVFADAGKSGSAFYERSRRSLEKVAGRLKTWNQDGKHADAVGRLA HHCCCCCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH GQLNGVCEKLSAEDAQKPVCDGLVKELKS HHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA