Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is yhjQ [H]
Identifier: 34498134
GI number: 34498134
Start: 2902496
End: 2903254
Strand: Reverse
Name: yhjQ [H]
Synonym: CV_2679
Alternate gene names: 34498134
Gene position: 2903254-2902496 (Counterclockwise)
Preceding gene: 34498135
Following gene: 34498133
Centisome position: 61.11
GC content: 70.49
Gene sequence:
>759_bases ATGGCTATTTTGTCCATTTGCGGAGTCCGAGGGGGGAGCGGCGCGACAGCGCTAGCCGCCGCCATTGCCTGGTATCGTGA AGAGCAGGCCCAGCCGACGCTGGCAATCGACCTGTGCCCGCAGAACTTGCTACGTCTGCACTTCGGCGTGCCGTGGAGCG AGCAGGGAGGCTGGCGCGCCAGCCTGCATGCGGGCTGCGACTGGACGGAGTCCGCCTGGCGGATAGGAAGCGGCCACCTG GCGCTGGTTCCGCATGGGACCTGCGCAGCCAGGGGGCCGGAACCGGACGCGGGCTGGCTGAGCGCGGAACTGGGCAAGCT GGAGAGGCCGGCGGGCGATCTGGTGCTGCTGGACACGCCGTCATGGGCCGGTCGCTGCCGCGACCAGGCATGGACCGCCG CCAGCCATGTGCTGGCGGTGTTGACGGCGGATTCCGTCAACTGCGTTCTGGCCGTCCGTCTGGAAGCGGAGCTGATGGCG CGCGGTGTGCCCCGCGACGGCATATTGTTCGCGATCAGCCAGTTCGACCCGGCGCGCAAGCTGGACCGGGACGTCGAGCG CGTGCTGCGCAGAACGCTGGGAAGCCGGCTGGCTCCGCGGCCGGTGACGCGTGACGAAGCGGTGCGCGAGGCCCTCGCCG CGGGCCTGCCGGTATCGGTGTTCGCGCCGGAAAGCCAGGCGGTCGACGATCTGCGGCAACTGGCGGTGTGGCTGGCGGTG AAGCTGAGGCGCGCCGAGCCGGAGGGCCGGGCTCCATGA
Upstream 100 bases:
>100_bases CGCGTGGATGGGCTGGCCCCGACGATCGACCGGTTCCGTATCCGAGCCGCCGACATAGGTTTGCGCGCCGCATGGACTCG CCTGTCACATGAGGGCAGGT
Downstream 100 bases:
>100_bases GCCGCGCTCGTTGGGCCGCGTGGGCGGTTCGCTGCGGGCTTCTTCACCGAGCGGACCGGCCGGCTGTCGGGTTGGCTCTG CTATCCCTGCTGTTCGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MAILSICGVRGGSGATALAAAIAWYREEQAQPTLAIDLCPQNLLRLHFGVPWSEQGGWRASLHAGCDWTESAWRIGSGHL ALVPHGTCAARGPEPDAGWLSAELGKLERPAGDLVLLDTPSWAGRCRDQAWTAASHVLAVLTADSVNCVLAVRLEAELMA RGVPRDGILFAISQFDPARKLDRDVERVLRRTLGSRLAPRPVTRDEAVREALAAGLPVSVFAPESQAVDDLRQLAVWLAV KLRRAEPEGRAP
Sequences:
>Translated_252_residues MAILSICGVRGGSGATALAAAIAWYREEQAQPTLAIDLCPQNLLRLHFGVPWSEQGGWRASLHAGCDWTESAWRIGSGHL ALVPHGTCAARGPEPDAGWLSAELGKLERPAGDLVLLDTPSWAGRCRDQAWTAASHVLAVLTADSVNCVLAVRLEAELMA RGVPRDGILFAISQFDPARKLDRDVERVLRRTLGSRLAPRPVTRDEAVREALAAGLPVSVFAPESQAVDDLRQLAVWLAV KLRRAEPEGRAP >Mature_251_residues AILSICGVRGGSGATALAAAIAWYREEQAQPTLAIDLCPQNLLRLHFGVPWSEQGGWRASLHAGCDWTESAWRIGSGHLA LVPHGTCAARGPEPDAGWLSAELGKLERPAGDLVLLDTPSWAGRCRDQAWTAASHVLAVLTADSVNCVLAVRLEAELMAR GVPRDGILFAISQFDPARKLDRDVERVLRRTLGSRLAPRPVTRDEAVREALAAGLPVSVFAPESQAVDDLRQLAVWLAVK LRRAEPEGRAP
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017746 [H]
Pfam domain/function: PF06564 YhjQ [H]
EC number: NA
Molecular weight: Translated: 27124; Mature: 26993
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAILSICGVRGGSGATALAAAIAWYREEQAQPTLAIDLCPQNLLRLHFGVPWSEQGGWRA CCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCCCCEEE SLHAGCDWTESAWRIGSGHLALVPHGTCAARGPEPDAGWLSAELGKLERPAGDLVLLDTP EECCCCCCCCHHHEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECC SWAGRCRDQAWTAASHVLAVLTADSVNCVLAVRLEAELMARGVPRDGILFAISQFDPARK CHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEECHHHHHCCCCCCCEEEEEECCCCHHH LDRDVERVLRRTLGSRLAPRPVTRDEAVREALAAGLPVSVFAPESQAVDDLRQLAVWLAV HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH KLRRAEPEGRAP HHHHCCCCCCCC >Mature Secondary Structure AILSICGVRGGSGATALAAAIAWYREEQAQPTLAIDLCPQNLLRLHFGVPWSEQGGWRA CEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHCCCCCCCCCCEEE SLHAGCDWTESAWRIGSGHLALVPHGTCAARGPEPDAGWLSAELGKLERPAGDLVLLDTP EECCCCCCCCHHHEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECC SWAGRCRDQAWTAASHVLAVLTADSVNCVLAVRLEAELMARGVPRDGILFAISQFDPARK CHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEECHHHHHCCCCCCCEEEEEECCCCHHH LDRDVERVLRRTLGSRLAPRPVTRDEAVREALAAGLPVSVFAPESQAVDDLRQLAVWLAV HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH KLRRAEPEGRAP HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]