| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is bcsB [H]
Identifier: 34498132
GI number: 34498132
Start: 2897692
End: 2899908
Strand: Reverse
Name: bcsB [H]
Synonym: CV_2677
Alternate gene names: 34498132
Gene position: 2899908-2897692 (Counterclockwise)
Preceding gene: 34498133
Following gene: 34498131
Centisome position: 61.04
GC content: 67.61
Gene sequence:
>2217_bases GTGTGGGCGCTGTGCCTGCTGACGCTGTTTTGCCAGGCCGCGCCTGCCACGGAGTCCGCCGCTGCGCCATCGTCTCAACT GGCGAGCGTCCGGACGTTGAGCTTCAGGCAGATGGGCGCCGGTTCGGCGCTCAGGCTGCGGGGCGGCAACGCCATCGCCA CCATAGGCTTCGGCAGCCGCGCCGACGAGCTGGTCACCTCGCTGACGCTGAAACTGCGCTACATCTATTCGCCGGCGATG TTGACCGACCTGTCTCATGTCCAGGTGATCGTCAACGATCAGGTGGTTGCCGTCCTGCCTTTCGCCAAGGATCAGGGCGG CCGGGCTCAGGAGGCGTCGCTGACGCTGGATCCGCGGCTGCTCACCAGCTTCAACCGCATACAGTTCCGCTTGATCGGCC ATTACACGCTGCGCTGCGAGGATGAGACCAACAGCAGCATCTGGGCGGAAATCAGCAACGGCAGCGAGATCCAGATGACG ACGCAGGCCTTGTCGATGGCCAACGACCTCGTGTACTTCCCCGAGCCCTTTTTCTATGCGCTCGACTACTCGCAGCTGGA GTTGCCCATGGTGTTCGCCGGCCGGCCGTCGATGGGCGTGCTGCAGGCCGCCGGCGAGCTCGCCTCCTGGTTCGGCGCGC TGTCCGGCTGGCGCGGCGCGCGCTTCCCCGCGGTGCTGGACGGCATGCCGCCTCCGCGCCACGCCATCGTTTTCGCCGCC AATGGCCAGCGGCCCGGGTTCCTGAAGGGCCTGCCGCCGGTGTCGGCGCCGATGATCGCCGTGATGTCCCATCCCTCCCG GCCGGAGTTCAAGCTGCTGGTGCTGATGGGCCGGGACGACCAGGACCTGCAGCAGGCCGCGCGCGCGCTGGTGCTGGGAC AGGCTGGCATGAGCGGCGACATGGTCCGGGTGGGGCAGGTGAGGCTGGTGGCGCCGCGCAAGCCCTACGACGCGCCCAAC TGGGTCCGCTCCGACGGTCCGACGCGGCTGGGCAGCCTGGCCGCGCGCAAGGAGGACCTGCAAGTGTCCGGAGTGCAGCT TGCGCCGATAAGGGTGGCTTTCCGCGTGCCGGGCGACCTGTTCACCTGGGGTAGCCGCGGCATTCCGCTCAATCTGAAAT TCCGTTACACGGGCCCCCAGGCCAACAATGGCTCGCGGCTCAGCATAGGCGTCAACGACTTTTTCGTTCAGAGCCTGAGT TTGAGCGCCAACGGCATTGGCGGCGCTCAAGCCGGCATGCGGATGCCGGTGTTGGAGAATGGCCTGCTGACCAGCGTGGA CCGGGTCCTGCTGCCGCCGTTCCGGGTCGGCAGCCGCAACGAGCTGGAGTTCCAGTACAGCTTCGCCAGCGAGAAGCAGG GGGAATGCGCGAGCGGCGCGCTGGACAGTTTCCATGGCGAGGTCGATCCGGATTCGACGATGGATTTCAGCAAGTACCCG CACTACGCGCAAATGCCCAATCTCAGTCTGTTCGCGACGTCGGGCTATCCATTCACCCGGCTGGCCGACCTGGCCGAGAC CGCGCTCGTCCTGCCCGCGCGGCCGCAAACCTCGGACATCAACGTCTTTCTGACGGTGATGGGGCGGATGGGCGCTTCCA CCGGCTTTCCTGCGCTGCGCTACCGGCTGGTGAGCGAGGACGACGTGGACCGCGTCAACAATGCCGACCTGCTGGTGATC GGCGATTCCCGTGAGCTCAAGTTGCTGCGCGCTTGGCGCGACAAGCTGCCCGCCTTGCTGGAGGGCGATTTCCGCCAGGT GGGAAATGGCGGGGCCGCCGCGAAGGATGATGGGGCGGCGCTGCTGCCGGGGGCTACGCTCCATCAGGCCAACGGCCGGG CAGACTTTTCCGCGCGCGGACGGGTGGGCGCCTTGCTGGGGCTGGAATCGCCTCTGGCGCCGGGCCGCAGCGCCGTGATC ATCACGGCCAGCGAGGCCGATGCGATGGCTGGCGTGGCTTCGGCGCTGATCGACGACGCCGCGCTGTCCCAGATGTCCGG CAGCGTGGTGCTGATGCGCGGCGGCACGATAGACAGCCAGCTGCTGGGGCCGGTCTACCATGTCGGCAGCCTGCCGCCAT GGGACTGGGCGTGGTTGCTCCTGTCGGGCCACCCGCTGCTGCTTGCCATGCTGACGGCGTTGGCGGTGCTGCTCCTGGCC TTCGTCATCCTGCGCATCCTCCGGATACTGGCGGCGCGCCGGCTGAGGGAGTCCTGA
Upstream 100 bases:
>100_bases GCCGGCCCGCTTCTGTGCTGTGGCTGCTGAGCCTGCTGCCCAGGCAGCCCATATCGATTCGGGACTGAACATGATCAACG GAACAGGGAAGTGGTTATGG
Downstream 100 bases:
>100_bases TGTCGGCCGTTTCCATCCCGCTGTTCGCGGCGTTGCTGCTGGACGCGCTGCCGGCATTGGCGGCCCCCTGCGATGGCTGG CCGGACTGGCAGGCGTTCCT
Product: cellulose synthase regulator protein
Products: NA
Alternate protein names: Cellulose synthase regulatory subunit [H]
Number of amino acids: Translated: 738; Mature: 738
Protein sequence:
>738_residues MWALCLLTLFCQAAPATESAAAPSSQLASVRTLSFRQMGAGSALRLRGGNAIATIGFGSRADELVTSLTLKLRYIYSPAM LTDLSHVQVIVNDQVVAVLPFAKDQGGRAQEASLTLDPRLLTSFNRIQFRLIGHYTLRCEDETNSSIWAEISNGSEIQMT TQALSMANDLVYFPEPFFYALDYSQLELPMVFAGRPSMGVLQAAGELASWFGALSGWRGARFPAVLDGMPPPRHAIVFAA NGQRPGFLKGLPPVSAPMIAVMSHPSRPEFKLLVLMGRDDQDLQQAARALVLGQAGMSGDMVRVGQVRLVAPRKPYDAPN WVRSDGPTRLGSLAARKEDLQVSGVQLAPIRVAFRVPGDLFTWGSRGIPLNLKFRYTGPQANNGSRLSIGVNDFFVQSLS LSANGIGGAQAGMRMPVLENGLLTSVDRVLLPPFRVGSRNELEFQYSFASEKQGECASGALDSFHGEVDPDSTMDFSKYP HYAQMPNLSLFATSGYPFTRLADLAETALVLPARPQTSDINVFLTVMGRMGASTGFPALRYRLVSEDDVDRVNNADLLVI GDSRELKLLRAWRDKLPALLEGDFRQVGNGGAAAKDDGAALLPGATLHQANGRADFSARGRVGALLGLESPLAPGRSAVI ITASEADAMAGVASALIDDAALSQMSGSVVLMRGGTIDSQLLGPVYHVGSLPPWDWAWLLLSGHPLLLAMLTALAVLLLA FVILRILRILAARRLRES
Sequences:
>Translated_738_residues MWALCLLTLFCQAAPATESAAAPSSQLASVRTLSFRQMGAGSALRLRGGNAIATIGFGSRADELVTSLTLKLRYIYSPAM LTDLSHVQVIVNDQVVAVLPFAKDQGGRAQEASLTLDPRLLTSFNRIQFRLIGHYTLRCEDETNSSIWAEISNGSEIQMT TQALSMANDLVYFPEPFFYALDYSQLELPMVFAGRPSMGVLQAAGELASWFGALSGWRGARFPAVLDGMPPPRHAIVFAA NGQRPGFLKGLPPVSAPMIAVMSHPSRPEFKLLVLMGRDDQDLQQAARALVLGQAGMSGDMVRVGQVRLVAPRKPYDAPN WVRSDGPTRLGSLAARKEDLQVSGVQLAPIRVAFRVPGDLFTWGSRGIPLNLKFRYTGPQANNGSRLSIGVNDFFVQSLS LSANGIGGAQAGMRMPVLENGLLTSVDRVLLPPFRVGSRNELEFQYSFASEKQGECASGALDSFHGEVDPDSTMDFSKYP HYAQMPNLSLFATSGYPFTRLADLAETALVLPARPQTSDINVFLTVMGRMGASTGFPALRYRLVSEDDVDRVNNADLLVI GDSRELKLLRAWRDKLPALLEGDFRQVGNGGAAAKDDGAALLPGATLHQANGRADFSARGRVGALLGLESPLAPGRSAVI ITASEADAMAGVASALIDDAALSQMSGSVVLMRGGTIDSQLLGPVYHVGSLPPWDWAWLLLSGHPLLLAMLTALAVLLLA FVILRILRILAARRLRES >Mature_738_residues MWALCLLTLFCQAAPATESAAAPSSQLASVRTLSFRQMGAGSALRLRGGNAIATIGFGSRADELVTSLTLKLRYIYSPAM LTDLSHVQVIVNDQVVAVLPFAKDQGGRAQEASLTLDPRLLTSFNRIQFRLIGHYTLRCEDETNSSIWAEISNGSEIQMT TQALSMANDLVYFPEPFFYALDYSQLELPMVFAGRPSMGVLQAAGELASWFGALSGWRGARFPAVLDGMPPPRHAIVFAA NGQRPGFLKGLPPVSAPMIAVMSHPSRPEFKLLVLMGRDDQDLQQAARALVLGQAGMSGDMVRVGQVRLVAPRKPYDAPN WVRSDGPTRLGSLAARKEDLQVSGVQLAPIRVAFRVPGDLFTWGSRGIPLNLKFRYTGPQANNGSRLSIGVNDFFVQSLS LSANGIGGAQAGMRMPVLENGLLTSVDRVLLPPFRVGSRNELEFQYSFASEKQGECASGALDSFHGEVDPDSTMDFSKYP HYAQMPNLSLFATSGYPFTRLADLAETALVLPARPQTSDINVFLTVMGRMGASTGFPALRYRLVSEDDVDRVNNADLLVI GDSRELKLLRAWRDKLPALLEGDFRQVGNGGAAAKDDGAALLPGATLHQANGRADFSARGRVGALLGLESPLAPGRSAVI ITASEADAMAGVASALIDDAALSQMSGSVVLMRGGTIDSQLLGPVYHVGSLPPWDWAWLLLSGHPLLLAMLTALAVLLLA FVILRILRILAARRLRES
Specific function: Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass type I membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AcsB/BcsB family [H]
Homologues:
Organism=Escherichia coli, GI1789952, Length=727, Percent_Identity=36.726272352132, Blast_Score=483, Evalue=1e-137,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003920 - InterPro: IPR018513 [H]
Pfam domain/function: PF03170 BcsB [H]
EC number: NA
Molecular weight: Translated: 79330; Mature: 79330
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWALCLLTLFCQAAPATESAAAPSSQLASVRTLSFRQMGAGSALRLRGGNAIATIGFGSR CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCC ADELVTSLTLKLRYIYSPAMLTDLSHVQVIVNDQVVAVLPFAKDQGGRAQEASLTLDPRL HHHHHHHHHEEEEEEECCHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCCCEEEECHHH LTSFNRIQFRLIGHYTLRCEDETNSSIWAEISNGSEIQMTTQALSMANDLVYFPEPFFYA HHCCCEEEEEEEEEEEEEECCCCCCEEEEEECCCCEEEEHHHHHHHHCCEEECCCCEEEE LDYSQLELPMVFAGRPSMGVLQAAGELASWFGALSGWRGARFPAVLDGMPPPRHAIVFAA ECCCCEECCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEEE NGQRPGFLKGLPPVSAPMIAVMSHPSRPEFKLLVLMGRDDQDLQQAARALVLGQAGMSGD CCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHEEECCCCCCC MVRVGQVRLVAPRKPYDAPNWVRSDGPTRLGSLAARKEDLQVSGVQLAPIRVAFRVPGDL EEEECCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCEEEEEEEEEEECCCCE FTWGSRGIPLNLKFRYTGPQANNGSRLSIGVNDFFVQSLSLSANGIGGAQAGMRMPVLEN EECCCCCCEEEEEEEECCCCCCCCCEEEEECHHHHHEEEECCCCCCCCCCCCCCCCHHCC GLLTSVDRVLLPPFRVGSRNELEFQYSFASEKQGECASGALDSFHGEVDPDSTMDFSKYP CCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHCCHHHCCCCCCCCCCCCHHCCC HYAQMPNLSLFATSGYPFTRLADLAETALVLPARPQTSDINVFLTVMGRMGASTGFPALR CHHCCCCCEEEEECCCCHHHHHHHHHHEEEECCCCCCCCCEEEEEEHHHCCCCCCCHHHE YRLVSEDDVDRVNNADLLVIGDSRELKLLRAWRDKLPALLEGDFRQVGNGGAAAKDDGAA EEECCCCCHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHCCCHHHHCCCCCCCCCCCCE LLPGATLHQANGRADFSARGRVGALLGLESPLAPGRSAVIITASEADAMAGVASALIDDA ECCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH ALSQMSGSVVLMRGGTIDSQLLGPVYHVGSLPPWDWAWLLLSGHPLLLAMLTALAVLLLA HHHHCCCCEEEEECCCCCHHHHCHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH FVILRILRILAARRLRES HHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWALCLLTLFCQAAPATESAAAPSSQLASVRTLSFRQMGAGSALRLRGGNAIATIGFGSR CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCC ADELVTSLTLKLRYIYSPAMLTDLSHVQVIVNDQVVAVLPFAKDQGGRAQEASLTLDPRL HHHHHHHHHEEEEEEECCHHHHCCCEEEEEECCCEEEEEEECCCCCCCCCCCEEEECHHH LTSFNRIQFRLIGHYTLRCEDETNSSIWAEISNGSEIQMTTQALSMANDLVYFPEPFFYA HHCCCEEEEEEEEEEEEEECCCCCCEEEEEECCCCEEEEHHHHHHHHCCEEECCCCEEEE LDYSQLELPMVFAGRPSMGVLQAAGELASWFGALSGWRGARFPAVLDGMPPPRHAIVFAA ECCCCEECCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCEEEEEEE NGQRPGFLKGLPPVSAPMIAVMSHPSRPEFKLLVLMGRDDQDLQQAARALVLGQAGMSGD CCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHEEECCCCCCC MVRVGQVRLVAPRKPYDAPNWVRSDGPTRLGSLAARKEDLQVSGVQLAPIRVAFRVPGDL EEEECCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEECCEEEEEEEEEEECCCCE FTWGSRGIPLNLKFRYTGPQANNGSRLSIGVNDFFVQSLSLSANGIGGAQAGMRMPVLEN EECCCCCCEEEEEEEECCCCCCCCCEEEEECHHHHHEEEECCCCCCCCCCCCCCCCHHCC GLLTSVDRVLLPPFRVGSRNELEFQYSFASEKQGECASGALDSFHGEVDPDSTMDFSKYP CCHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHCCHHHCCCCCCCCCCCCHHCCC HYAQMPNLSLFATSGYPFTRLADLAETALVLPARPQTSDINVFLTVMGRMGASTGFPALR CHHCCCCCEEEEECCCCHHHHHHHHHHEEEECCCCCCCCCEEEEEEHHHCCCCCCCHHHE YRLVSEDDVDRVNNADLLVIGDSRELKLLRAWRDKLPALLEGDFRQVGNGGAAAKDDGAA EEECCCCCHHHCCCCCEEEECCCCCHHHHHHHHHHCCHHHCCCHHHHCCCCCCCCCCCCE LLPGATLHQANGRADFSARGRVGALLGLESPLAPGRSAVIITASEADAMAGVASALIDDA ECCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH ALSQMSGSVVLMRGGTIDSQLLGPVYHVGSLPPWDWAWLLLSGHPLLLAMLTALAVLLLA HHHHCCCCEEEEECCCCCHHHHCHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHH FVILRILRILAARRLRES HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]