Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is 34498116
Identifier: 34498116
GI number: 34498116
Start: 2874462
End: 2874887
Strand: Reverse
Name: 34498116
Synonym: CV_2661
Alternate gene names: NA
Gene position: 2874887-2874462 (Counterclockwise)
Preceding gene: 34498117
Following gene: 34498115
Centisome position: 60.51
GC content: 67.37
Gene sequence:
>426_bases ATGGCAAGGCTGCTTGTTCCCGGCGCTGTACCGGATGGCCGTGCCTGGAACGCCGCAGCCCCGCAGGGAATAGGAATCGG CCGTTTCATTGATGCCTTCGCCGCAATGGGCGGCGGCGGGGGCGAGGTGGGCCGGGCAGCAGGCGTACAGCGCCGTGGCG TAAAGGCTGTTCGCGGTGCGGAGCGCGCGGCGGGTCATGCGGTGCTGCGAGGGAAGGGCAATGGTCTGCAGCGGGCAGAT CCGGCTGCAGTCTTCGTCCCGTTCGGCCTGTATCACCGCGTCGGGCGCGGCATGGTCGGCCATGGAGGACGCCCGCAGGT AAAGAGTGCCTTGCTTGGACGGCTTCGGGGAGAAGCCCAGGTGGATGAGGGAAGAGCCCTTGGGCGGCGCGGGATGGGGG AAAGTACGGACGATGGCCTATATTGA
Upstream 100 bases:
>100_bases CATGAAGCAATAACCGATAATGATGCCCTTGATTTCCTGATCTGTCAATGCTTTTGGGCGGGAGGCGCGGCGCCCGCGGT GCAGACGCCGAAAACAATGA
Downstream 100 bases:
>100_bases CGCCGGCATGCATTTCGTCGCCAGATTGGGGCCGAATCAAAAATTGCGGCATTTTTCGCCAGCCAAACGCCGATATTTTT TACCCGAGCCATTTGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MARLLVPGAVPDGRAWNAAAPQGIGIGRFIDAFAAMGGGGGEVGRAAGVQRRGVKAVRGAERAAGHAVLRGKGNGLQRAD PAAVFVPFGLYHRVGRGMVGHGGRPQVKSALLGRLRGEAQVDEGRALGRRGMGESTDDGLY
Sequences:
>Translated_141_residues MARLLVPGAVPDGRAWNAAAPQGIGIGRFIDAFAAMGGGGGEVGRAAGVQRRGVKAVRGAERAAGHAVLRGKGNGLQRAD PAAVFVPFGLYHRVGRGMVGHGGRPQVKSALLGRLRGEAQVDEGRALGRRGMGESTDDGLY >Mature_140_residues ARLLVPGAVPDGRAWNAAAPQGIGIGRFIDAFAAMGGGGGEVGRAAGVQRRGVKAVRGAERAAGHAVLRGKGNGLQRADP AAVFVPFGLYHRVGRGMVGHGGRPQVKSALLGRLRGEAQVDEGRALGRRGMGESTDDGLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14407; Mature: 14276
Theoretical pI: Translated: 11.98; Mature: 11.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLLVPGAVPDGRAWNAAAPQGIGIGRFIDAFAAMGGGGGEVGRAAGVQRRGVKAVRGA CCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHH ERAAGHAVLRGKGNGLQRADPAAVFVPFGLYHRVGRGMVGHGGRPQVKSALLGRLRGEAQ HHHCCCEEEECCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC VDEGRALGRRGMGESTDDGLY CCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure ARLLVPGAVPDGRAWNAAAPQGIGIGRFIDAFAAMGGGGGEVGRAAGVQRRGVKAVRGA CCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCHHHHHHHHHHHH ERAAGHAVLRGKGNGLQRADPAAVFVPFGLYHRVGRGMVGHGGRPQVKSALLGRLRGEAQ HHHCCCEEEECCCCCCCCCCCCEEEECHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC VDEGRALGRRGMGESTDDGLY CCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA