Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
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Accession | NC_005085 |
Length | 4,751,080 |
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The map label for this gene is 34498115
Identifier: 34498115
GI number: 34498115
Start: 2873763
End: 2874179
Strand: Reverse
Name: 34498115
Synonym: CV_2660
Alternate gene names: NA
Gene position: 2874179-2873763 (Counterclockwise)
Preceding gene: 34498116
Following gene: 34498114
Centisome position: 60.5
GC content: 58.99
Gene sequence:
>417_bases ATGGAAAAGGCGCCGTTGTTGCTGGAAACGGTTGAGCAGGCGGTCAGGATTTTGCAGGAATCTCCTTTTGTCGCCATCTG GAATTACAAGGTCCTGAGCGTGCAAGCCGGCGCAGTGGCGTTGGCATTGCCGGCGCAGCCTCAGTTTTACCGTCCGGGCG GCATCATCCAGGGCGGCTGTCTGATGACCTTGGCGGACACCGCTTTTTGGCTGGCGGCCATGACTGAGCTGGGCATCGAT GCTCCCATTGTCACCCTGGAAATGAAAACCCATTTTCTGCGGGCGGCGCAGGCTGACGTTTACTGCCGCGCCGAAGTGAT GAAAAGCGGCAGGCGCGTTACCTACGGAACGGCCACCATCACTGACGCAGCAGGTCAAACGCTGTCGCATCACACCTTGA CCTACCTCGCAGCCTGA
Upstream 100 bases:
>100_bases TAATATGGCCAGCTCTCTGAAAAGCGCTTGTTAGATAATTTTTGTGCGCATAATCTATGCGCAAAATAGCTTAATCAAAA CAATGTATATGGAGGAGCCA
Downstream 100 bases:
>100_bases ACCCATTGCCGGGAACCACTTCACCGGTCGGACTTGGCCCGTTTGATTGACCATCTCCGCTCGCAGGCCGTGTTGCGCCT GTATTTCGGCGACGCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MEKAPLLLETVEQAVRILQESPFVAIWNYKVLSVQAGAVALALPAQPQFYRPGGIIQGGCLMTLADTAFWLAAMTELGID APIVTLEMKTHFLRAAQADVYCRAEVMKSGRRVTYGTATITDAAGQTLSHHTLTYLAA
Sequences:
>Translated_138_residues MEKAPLLLETVEQAVRILQESPFVAIWNYKVLSVQAGAVALALPAQPQFYRPGGIIQGGCLMTLADTAFWLAAMTELGID APIVTLEMKTHFLRAAQADVYCRAEVMKSGRRVTYGTATITDAAGQTLSHHTLTYLAA >Mature_138_residues MEKAPLLLETVEQAVRILQESPFVAIWNYKVLSVQAGAVALALPAQPQFYRPGGIIQGGCLMTLADTAFWLAAMTELGID APIVTLEMKTHFLRAAQADVYCRAEVMKSGRRVTYGTATITDAAGQTLSHHTLTYLAA
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14939; Mature: 14939
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKAPLLLETVEQAVRILQESPFVAIWNYKVLSVQAGAVALALPAQPQFYRPGGIIQGGC CCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCEEEEEECCCCCEECCCCEEECCC LMTLADTAFWLAAMTELGIDAPIVTLEMKTHFLRAAQADVYCRAEVMKSGRRVTYGTATI HHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCEEEHHHHHCCCEEEECCEEE TDAAGQTLSHHTLTYLAA ECCCCCCCCCCEEEEEEC >Mature Secondary Structure MEKAPLLLETVEQAVRILQESPFVAIWNYKVLSVQAGAVALALPAQPQFYRPGGIIQGGC CCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCEEEEEECCCCCEECCCCEEECCC LMTLADTAFWLAAMTELGIDAPIVTLEMKTHFLRAAQADVYCRAEVMKSGRRVTYGTATI HHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCEEEHHHHHCCCEEEECCEEE TDAAGQTLSHHTLTYLAA ECCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA