| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498093
Identifier: 34498093
GI number: 34498093
Start: 2846523
End: 2848814
Strand: Reverse
Name: 34498093
Synonym: CV_2638
Alternate gene names: NA
Gene position: 2848814-2846523 (Counterclockwise)
Preceding gene: 34498094
Following gene: 34498090
Centisome position: 59.96
GC content: 70.64
Gene sequence:
>2292_bases ATGACGCCGGACACGGTCGCCATTCTGCACAATCTGAGCCGCCAGCTGGCCGAAGGCAGCGGCGAGTCGCTGGACATCCG CGAATGCGCGAGGTTGTCGCTGCAAATGGAAAAGCTGGCCGGCAAGCTGCCGGCGGACAGTCCGTTGGCCGAGTTGAGCG AGCGGCTGGCGCTGCAGGGGCAGGCCGCCTGGGCGCAGCTGGCCCGGGCGGAAGCCGAAACGCAACTGCTGCCGCAATTC CAGCGCTATGACCGTCCGGGCGCCGGCAGCGAAAAGCATGCGGGCGCGTCGGTCGGCGCCGGGCTCGGCCTGGGCGAAGG CGGGGCCGGCGCCAAGGCGACATTCTCGGTGGGGCTGGGCTGGGGCAGAAGCATGGACAACGACGATGAAGGCTTCGTGT TCCAGAACAAGAGCCACTCCGCCTCCGCTTCCGCCGGCGTCAAAGGCGGCGTCGGCATCGCCTCGCTGTCGGGCGGGGTG GAGGGGCGGGTGCAAAAGACGCGCTACCGGGAATACAACAGCGCCAAGGCCTTCGTGCATCTGAATGCGGAGAGGCTGCG GCACGGTTCCCGCCGGGATACGCTGGGCGTCGGCGCCCGCGCCGCGGTGGGCGCGCTGATCCGCCTGTTCCGGCCGGGGC ACGGCAACGAGTTGCAGCATTACCACCGTTTGCAGCAGCAGGCGGCCGACCAGCAGCAGCGGCTGGGCGTGCTGCAGGGC TGGCTCGGACAGCGCGACGCATCGTCGGCGCTGCCTGGCGGCCGCGCGCCCGTGGTGCCGAGCGGCGACGTGGTCAGCGT CAAGGGCAGCGCCAATGCGCGGGCCGCGGCGGCCGGCGTCAGCGCCGGCGCGGCGGTGTCGGTCGAGCGCATCGACATCC AGGCGGACTCGCTGACGCCGTACTGGCAGGCGCTGAGCGCGCCGGAAGGCGCGGCGCGCAGCGCCGTCGTCGCCGCGCAG CGCCAGGCCGGCATCGAGGCAAAAGCCCAGGCGCTGTTCGACGGCCCGAAAGACAAGGCTGGAACGCGGCCGCTCAGCCG GCTGACCGGGGGCGGAGCCGCGTCCTCGGCCGCCTTGCGCGAATGCTCGCCGGCGGCATTGCGCCAGGCGGCCGAGCGGC TGGGCGCGGAGCTGGATCATTTTTGCGCGGTGGCGCAGCAGCTGGATGCCGGCGTGGGCAAGCGCCAGGGCGGCGCGCAG ATCGAAAAATCCATCGTGTCCAGCTGGCAGGGCAAGCGGCGAGAGGACGCGCTGGCCAATATGGCGCTGGCGCACGCGGC TTTGCTGATCGCGGCAAGGTCGCGCGGAGACGCCGGCGAGGCGGAGCGGGCGCTGAAGGACATGGCCGCCAGGTTGTACG CGCCGCCGGTCCGCCACAATGCGGAGGCGCTGTCCAAGCGAGTGGCTTTCCGCGACACGCTGGAGCTGCAAATCCGCAAC CGCAGCTACGCGCTGGACCTGGGCGGCGGCGTGGGACCGCTGGGCGTGAAGCTGGAGGCATCCCTGACCGAACAGCACAG GGTGCACTTGAATCCGGTACGGGCCGGCGATTACAAGGACCTGCGCGTCACTCTGTCGGGCAGCCTGGGCGACGCCGGCG CGCTGAACAAGCTGAAGGACGCGCTGGCAGCGCAGTTGGCGCCGCATGGATTGGCGGACGCGCTGCCGGCGGCGCTGGCC GGCATGGAAACGGCGCTGACCGGACAGCTGGGCGCCGGGGCCACCCTGCTGCTGCGTTTCTATCGGCCGCAATACCAGGG GCAAGCCGATTTCCCGCAAGAGGCGGCGGGCTTCCGCCTGCAGCTGGCCAGAGTGGTCGCCAGCGGCGACGCTTCGGTGG CCTTGTCCGGCGGGGTGCCGCTGCAACCCGGCGTTTCGCTGGAGCTGGGGTTGAGCGCGGGCGGCTCGGCCAGCGTCGTG GCCTACGAGCGCTGGGGCGACAACACCCTGACCGCGCCGATGATGCATTACCTGCACTTGCAGGGAGTGGGCGAGCCCGA GCGCTGGCAAGGCATGGCCGACATGCAGAAACCCGCGCTGAGCGGTCTGTTCCGCCAGCTGGCCGATCCGGGTTCCGCGG TGAGGAAGGAAGCGGAGTATTTTCTGAAGCGCCAGCCTCAGGATGGCTTCGGCGAGCGCTTCTTCGCCGCGATGAGCGGC TTCTCTTCCGGCGAGGTGGATTTCGACGGCGCCAGGACGGCGCTGGACGAGATGATGCAGCGTCAGCTCCCGTTGTGGCA GGCCGACAAGCTGGCCTTCCCCGGACTGGTCGAGCAGCCGCTGGCGGCATGA
Upstream 100 bases:
>100_bases TGAAACCTTGCGGGCGATGTCAGATAGGGCGTATCAAGTGGCCGAGCCTGCCCGGCCGCGCTGGGTGGATGCGCTGAGGC TGGGGCCGCGCCGCCATCCG
Downstream 100 bases:
>100_bases GCCGAAAAGGCGCGGCGGACAGGCATGGCGCGGCCATGCCTGTTTTTGCTTCCGCCGCTCAGCGCGGCCCCAGGATTTTC GGCAGCGCCGCCGCGCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 763; Mature: 762
Protein sequence:
>763_residues MTPDTVAILHNLSRQLAEGSGESLDIRECARLSLQMEKLAGKLPADSPLAELSERLALQGQAAWAQLARAEAETQLLPQF QRYDRPGAGSEKHAGASVGAGLGLGEGGAGAKATFSVGLGWGRSMDNDDEGFVFQNKSHSASASAGVKGGVGIASLSGGV EGRVQKTRYREYNSAKAFVHLNAERLRHGSRRDTLGVGARAAVGALIRLFRPGHGNELQHYHRLQQQAADQQQRLGVLQG WLGQRDASSALPGGRAPVVPSGDVVSVKGSANARAAAAGVSAGAAVSVERIDIQADSLTPYWQALSAPEGAARSAVVAAQ RQAGIEAKAQALFDGPKDKAGTRPLSRLTGGGAASSAALRECSPAALRQAAERLGAELDHFCAVAQQLDAGVGKRQGGAQ IEKSIVSSWQGKRREDALANMALAHAALLIAARSRGDAGEAERALKDMAARLYAPPVRHNAEALSKRVAFRDTLELQIRN RSYALDLGGGVGPLGVKLEASLTEQHRVHLNPVRAGDYKDLRVTLSGSLGDAGALNKLKDALAAQLAPHGLADALPAALA GMETALTGQLGAGATLLLRFYRPQYQGQADFPQEAAGFRLQLARVVASGDASVALSGGVPLQPGVSLELGLSAGGSASVV AYERWGDNTLTAPMMHYLHLQGVGEPERWQGMADMQKPALSGLFRQLADPGSAVRKEAEYFLKRQPQDGFGERFFAAMSG FSSGEVDFDGARTALDEMMQRQLPLWQADKLAFPGLVEQPLAA
Sequences:
>Translated_763_residues MTPDTVAILHNLSRQLAEGSGESLDIRECARLSLQMEKLAGKLPADSPLAELSERLALQGQAAWAQLARAEAETQLLPQF QRYDRPGAGSEKHAGASVGAGLGLGEGGAGAKATFSVGLGWGRSMDNDDEGFVFQNKSHSASASAGVKGGVGIASLSGGV EGRVQKTRYREYNSAKAFVHLNAERLRHGSRRDTLGVGARAAVGALIRLFRPGHGNELQHYHRLQQQAADQQQRLGVLQG WLGQRDASSALPGGRAPVVPSGDVVSVKGSANARAAAAGVSAGAAVSVERIDIQADSLTPYWQALSAPEGAARSAVVAAQ RQAGIEAKAQALFDGPKDKAGTRPLSRLTGGGAASSAALRECSPAALRQAAERLGAELDHFCAVAQQLDAGVGKRQGGAQ IEKSIVSSWQGKRREDALANMALAHAALLIAARSRGDAGEAERALKDMAARLYAPPVRHNAEALSKRVAFRDTLELQIRN RSYALDLGGGVGPLGVKLEASLTEQHRVHLNPVRAGDYKDLRVTLSGSLGDAGALNKLKDALAAQLAPHGLADALPAALA GMETALTGQLGAGATLLLRFYRPQYQGQADFPQEAAGFRLQLARVVASGDASVALSGGVPLQPGVSLELGLSAGGSASVV AYERWGDNTLTAPMMHYLHLQGVGEPERWQGMADMQKPALSGLFRQLADPGSAVRKEAEYFLKRQPQDGFGERFFAAMSG FSSGEVDFDGARTALDEMMQRQLPLWQADKLAFPGLVEQPLAA >Mature_762_residues TPDTVAILHNLSRQLAEGSGESLDIRECARLSLQMEKLAGKLPADSPLAELSERLALQGQAAWAQLARAEAETQLLPQFQ RYDRPGAGSEKHAGASVGAGLGLGEGGAGAKATFSVGLGWGRSMDNDDEGFVFQNKSHSASASAGVKGGVGIASLSGGVE GRVQKTRYREYNSAKAFVHLNAERLRHGSRRDTLGVGARAAVGALIRLFRPGHGNELQHYHRLQQQAADQQQRLGVLQGW LGQRDASSALPGGRAPVVPSGDVVSVKGSANARAAAAGVSAGAAVSVERIDIQADSLTPYWQALSAPEGAARSAVVAAQR QAGIEAKAQALFDGPKDKAGTRPLSRLTGGGAASSAALRECSPAALRQAAERLGAELDHFCAVAQQLDAGVGKRQGGAQI EKSIVSSWQGKRREDALANMALAHAALLIAARSRGDAGEAERALKDMAARLYAPPVRHNAEALSKRVAFRDTLELQIRNR SYALDLGGGVGPLGVKLEASLTEQHRVHLNPVRAGDYKDLRVTLSGSLGDAGALNKLKDALAAQLAPHGLADALPAALAG METALTGQLGAGATLLLRFYRPQYQGQADFPQEAAGFRLQLARVVASGDASVALSGGVPLQPGVSLELGLSAGGSASVVA YERWGDNTLTAPMMHYLHLQGVGEPERWQGMADMQKPALSGLFRQLADPGSAVRKEAEYFLKRQPQDGFGERFFAAMSGF SSGEVDFDGARTALDEMMQRQLPLWQADKLAFPGLVEQPLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80026; Mature: 79895
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDTVAILHNLSRQLAEGSGESLDIRECARLSLQMEKLAGKLPADSPLAELSERLALQG CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC QAAWAQLARAEAETQLLPQFQRYDRPGAGSEKHAGASVGAGLGLGEGGAGAKATFSVGLG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC WGRSMDNDDEGFVFQNKSHSASASAGVKGGVGIASLSGGVEGRVQKTRYREYNSAKAFVH CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCEEEEE LNAERLRHGSRRDTLGVGARAAVGALIRLFRPGHGNELQHYHRLQQQAADQQQRLGVLQG ECHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WLGQRDASSALPGGRAPVVPSGDVVSVKGSANARAAAAGVSAGAAVSVERIDIQADSLTP HCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCEEEEEEEEEEECCCCH YWQALSAPEGAARSAVVAAQRQAGIEAKAQALFDGPKDKAGTRPLSRLTGGGAASSAALR HHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHH ECSPAALRQAAERLGAELDHFCAVAQQLDAGVGKRQGGAQIEKSIVSSWQGKRREDALAN HCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH MALAHAALLIAARSRGDAGEAERALKDMAARLYAPPVRHNAEALSKRVAFRDTLELQIRN HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEEECC RSYALDLGGGVGPLGVKLEASLTEQHRVHLNPVRAGDYKDLRVTLSGSLGDAGALNKLKD CEEEEECCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHH ALAAQLAPHGLADALPAALAGMETALTGQLGAGATLLLRFYRPQYQGQADFPQEAAGFRL HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHH QLARVVASGDASVALSGGVPLQPGVSLELGLSAGGSASVVAYERWGDNTLTAPMMHYLHL HHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHH QGVGEPERWQGMADMQKPALSGLFRQLADPGSAVRKEAEYFLKRQPQDGFGERFFAAMSG CCCCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC FSSGEVDFDGARTALDEMMQRQLPLWQADKLAFPGLVEQPLAA CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCC >Mature Secondary Structure TPDTVAILHNLSRQLAEGSGESLDIRECARLSLQMEKLAGKLPADSPLAELSERLALQG CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC QAAWAQLARAEAETQLLPQFQRYDRPGAGSEKHAGASVGAGLGLGEGGAGAKATFSVGLG HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC WGRSMDNDDEGFVFQNKSHSASASAGVKGGVGIASLSGGVEGRVQKTRYREYNSAKAFVH CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHCCCCEEEEE LNAERLRHGSRRDTLGVGARAAVGALIRLFRPGHGNELQHYHRLQQQAADQQQRLGVLQG ECHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH WLGQRDASSALPGGRAPVVPSGDVVSVKGSANARAAAAGVSAGAAVSVERIDIQADSLTP HCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCEEEEEEEEEEECCCCH YWQALSAPEGAARSAVVAAQRQAGIEAKAQALFDGPKDKAGTRPLSRLTGGGAASSAALR HHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHH ECSPAALRQAAERLGAELDHFCAVAQQLDAGVGKRQGGAQIEKSIVSSWQGKRREDALAN HCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH MALAHAALLIAARSRGDAGEAERALKDMAARLYAPPVRHNAEALSKRVAFRDTLELQIRN HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCEEEEECC RSYALDLGGGVGPLGVKLEASLTEQHRVHLNPVRAGDYKDLRVTLSGSLGDAGALNKLKD CEEEEECCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHH ALAAQLAPHGLADALPAALAGMETALTGQLGAGATLLLRFYRPQYQGQADFPQEAAGFRL HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHH QLARVVASGDASVALSGGVPLQPGVSLELGLSAGGSASVVAYERWGDNTLTAPMMHYLHL HHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHH QGVGEPERWQGMADMQKPALSGLFRQLADPGSAVRKEAEYFLKRQPQDGFGERFFAAMSG CCCCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC FSSGEVDFDGARTALDEMMQRQLPLWQADKLAFPGLVEQPLAA CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA