Click here to switch to the map view.

The map label for this gene is spaN [H]

Identifier: 34498081

GI number: 34498081

Start: 2833065

End: 2834066

Strand: Reverse

Name: spaN [H]

Synonym: CV_2626

Alternate gene names: 34498081

Gene position: 2834066-2833065 (Counterclockwise)

Preceding gene: 34498082

Following gene: 34498080

Centisome position: 59.65

GC content: 73.35

Gene sequence:

>1002_bases
ATGGAAGGCGTGAAAACGGTGATGGTGGCGATGGCGCCGGCGACGGAGCAATCCGGGGACGGCATGGGCCTGGAAGAGGC
GTTCGAGCGCGAGGCGTCGTCGCTGGAGCGGGAACGCCAGAATGATGATTCCGAGCCCGGCGCGGAGCCCTCCGCCCTGG
CGGAGCGCTGGCAGCCGCCGCTGCCGCTGGATTGGCGGCAGAAACGGGACGCGCCGCGAGAGGCGCAGCCGCGCCGCGCG
GCATCGGTCGAGCAGGACGCCTCGCCCCGCGCGCATGTTGCCGGCGCCGCCGGGAAGCGCTTGTCGGAAGACGGCAAGGC
GGGCGCCCGCTGGGGCGGCAAGACCCAATTGTCGCCGTTCGCGTTGCCGGCCTGGAGGGAGGCGTTCGCGCCGCAGGCGA
TCGGCGGCGAAGGCGGGGAGGCGAGGCTTAAGGCCGTGGATGGCGCCGCGGCGCGGCTGAAGGATGAAGCGATGCCGCTG
GCCGGCGGCGACGCTGGGACGGTTTCGCCGCAGACGGAGACATTGCTCCAGGAACATGTGCGCGAAGCGGCGCCGGCGTC
GAATGACGCGCCGCCGGCGAAAAAAGCGCGCGAAGGCGAGACCAAGCCGGCGGCGATGCCGGCGCCGGGCATGGCGCCGC
AGGCGGCGCAGCACCAGGCGCATTTGCCGGCGCAGGCGGCCCAGCCAGCCGCGCCGCGCAGCCGCGCGGACTGGAAGCAG
GCGCTGGCCGCAGGCGCGGCGACGCCGGCGCAGGCGCAGGAGAGCGGCGCAGTCCTGACCTATCGCTTCCAGCGCTGGGG
CGGAGAGCACGCGGTGAGCGTGCAGGCGCTGGGCCATGCCGGAGCGACGCAGCTGTCGTTGACGCCATCCGACGGACTGG
TGCAGCAGCGCCTGGCCGAGCAGTGGCAAAGCGGCAATCCGCAGCAATGGACGCTGCGCGATGACGGCGGACAGGGCAGC
GGCGGCCGGCAGCCGCAGCGTGACGAGGAGGAAGAGGGTTGA

Upstream 100 bases:

>100_bases
GCAAGGAAGACAAATACCGCCGCTGGCAGCAGACGGAACGGCGCCGCGCGCGCCTGTTGAGCCTGCGCGCGGAAGAAACG
GAACAGGAAGAGGCGACGGC

Downstream 100 bases:

>100_bases
GGCTGGCATTGAGGCAGGTGGATGGCGCGGCGCTGGCGCTGCGGCGCTGCGGCGAGGCATGGGCCGGGCAGGACGTGCGC
ATCGCTTATCCGCCGTCCCA

Product: surface presentation of antigens secretory protein

Products: NA

Alternate protein names: Invasion protein invJ [H]

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MEGVKTVMVAMAPATEQSGDGMGLEEAFEREASSLERERQNDDSEPGAEPSALAERWQPPLPLDWRQKRDAPREAQPRRA
ASVEQDASPRAHVAGAAGKRLSEDGKAGARWGGKTQLSPFALPAWREAFAPQAIGGEGGEARLKAVDGAAARLKDEAMPL
AGGDAGTVSPQTETLLQEHVREAAPASNDAPPAKKAREGETKPAAMPAPGMAPQAAQHQAHLPAQAAQPAAPRSRADWKQ
ALAAGAATPAQAQESGAVLTYRFQRWGGEHAVSVQALGHAGATQLSLTPSDGLVQQRLAEQWQSGNPQQWTLRDDGGQGS
GGRQPQRDEEEEG

Sequences:

>Translated_333_residues
MEGVKTVMVAMAPATEQSGDGMGLEEAFEREASSLERERQNDDSEPGAEPSALAERWQPPLPLDWRQKRDAPREAQPRRA
ASVEQDASPRAHVAGAAGKRLSEDGKAGARWGGKTQLSPFALPAWREAFAPQAIGGEGGEARLKAVDGAAARLKDEAMPL
AGGDAGTVSPQTETLLQEHVREAAPASNDAPPAKKAREGETKPAAMPAPGMAPQAAQHQAHLPAQAAQPAAPRSRADWKQ
ALAAGAATPAQAQESGAVLTYRFQRWGGEHAVSVQALGHAGATQLSLTPSDGLVQQRLAEQWQSGNPQQWTLRDDGGQGS
GGRQPQRDEEEEG
>Mature_333_residues
MEGVKTVMVAMAPATEQSGDGMGLEEAFEREASSLERERQNDDSEPGAEPSALAERWQPPLPLDWRQKRDAPREAQPRRA
ASVEQDASPRAHVAGAAGKRLSEDGKAGARWGGKTQLSPFALPAWREAFAPQAIGGEGGEARLKAVDGAAARLKDEAMPL
AGGDAGTVSPQTETLLQEHVREAAPASNDAPPAKKAREGETKPAAMPAPGMAPQAAQHQAHLPAQAAQPAAPRSRADWKQ
ALAAGAATPAQAQESGAVLTYRFQRWGGEHAVSVQALGHAGATQLSLTPSDGLVQQRLAEQWQSGNPQQWTLRDDGGQGS
GGRQPQRDEEEEG

Specific function: Involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spaN family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003066
- ProDom:   PD004696 [H]

Pfam domain/function: PF02510 SPAN [H]

EC number: NA

Molecular weight: Translated: 35055; Mature: 35055

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGVKTVMVAMAPATEQSGDGMGLEEAFEREASSLERERQNDDSEPGAEPSALAERWQPP
CCCHHEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC
LPLDWRQKRDAPREAQPRRAASVEQDASPRAHVAGAAGKRLSEDGKAGARWGGKTQLSPF
CCCCHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ALPAWREAFAPQAIGGEGGEARLKAVDGAAARLKDEAMPLAGGDAGTVSPQTETLLQEHV
CCHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
REAAPASNDAPPAKKAREGETKPAAMPAPGMAPQAAQHQAHLPAQAAQPAAPRSRADWKQ
HHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCCCCHHHHHHH
ALAAGAATPAQAQESGAVLTYRFQRWGGEHAVSVQALGHAGATQLSLTPSDGLVQQRLAE
HHHHCCCCCHHHHHCCCEEEEEHHHCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHH
QWQSGNPQQWTLRDDGGQGSGGRQPQRDEEEEG
HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEGVKTVMVAMAPATEQSGDGMGLEEAFEREASSLERERQNDDSEPGAEPSALAERWQPP
CCCHHEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCC
LPLDWRQKRDAPREAQPRRAASVEQDASPRAHVAGAAGKRLSEDGKAGARWGGKTQLSPF
CCCCHHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
ALPAWREAFAPQAIGGEGGEARLKAVDGAAARLKDEAMPLAGGDAGTVSPQTETLLQEHV
CCHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
REAAPASNDAPPAKKAREGETKPAAMPAPGMAPQAAQHQAHLPAQAAQPAAPRSRADWKQ
HHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCCCCHHHHHHH
ALAAGAATPAQAQESGAVLTYRFQRWGGEHAVSVQALGHAGATQLSLTPSDGLVQQRLAE
HHHHCCCCCHHHHHCCCEEEEEHHHCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHH
QWQSGNPQQWTLRDDGGQGSGGRQPQRDEEEEG
HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8404849; 7752894; 11677609 [H]