Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
---|---|
Accession | NC_005085 |
Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34498053
Identifier: 34498053
GI number: 34498053
Start: 2806402
End: 2806791
Strand: Reverse
Name: 34498053
Synonym: CV_2598
Alternate gene names: NA
Gene position: 2806791-2806402 (Counterclockwise)
Preceding gene: 34498055
Following gene: 34498052
Centisome position: 59.08
GC content: 57.18
Gene sequence:
>390_bases ATGAAACTTCCTGACTCTTTGGCCGCATTGGAATGGGTTTGCGTGCTCTCGCCCCGCAGTGATCGCTGGCTCCTGGATCT GGCAGGCGTCCCCGCTTGGGGATGGTCCTATCCGCAAGGAATCACGTTGGCTATTGAAATCGAACTGGAGGTCTTGGATG ACGCCTGGCTCCAGCGCGTTTGTCTATGGCTGGCGTCGATACGCACCAATCTGGATGATGGCTTATTGCTCGAGCGCGGC AAACTATATCTGGTCCGCCGTCATGAGCATGGTCTCAGTGCCGTCGAGTGGGAAGCCACATTGAATCAGCAACTGGCCGT GGTGGCCTGGCTGGTCAAGCATGCTTCTTCGGTTTCATCCATTGGCTCGGCAGCTGGGAGGCGGGTATGA
Upstream 100 bases:
>100_bases AGAAGGGGCGTCGCTACGCAGGGTTTCAGGTCATCACCTGATAAATCTCCGCTGACGATCTTCGCACAATGTCAGCCTTC CCCAACGTAATCGAGACGCG
Downstream 100 bases:
>100_bases GAGCATCGAAATGGCTTGGCCCTGGCTTGGTCGCATTGACTTGCGCACAGGCGTTCGCAGCTATCCCATGGCAGAGTAGC GCGCCATTTTTCCTGTCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKLPDSLAALEWVCVLSPRSDRWLLDLAGVPAWGWSYPQGITLAIEIELEVLDDAWLQRVCLWLASIRTNLDDGLLLERG KLYLVRRHEHGLSAVEWEATLNQQLAVVAWLVKHASSVSSIGSAAGRRV
Sequences:
>Translated_129_residues MKLPDSLAALEWVCVLSPRSDRWLLDLAGVPAWGWSYPQGITLAIEIELEVLDDAWLQRVCLWLASIRTNLDDGLLLERG KLYLVRRHEHGLSAVEWEATLNQQLAVVAWLVKHASSVSSIGSAAGRRV >Mature_129_residues MKLPDSLAALEWVCVLSPRSDRWLLDLAGVPAWGWSYPQGITLAIEIELEVLDDAWLQRVCLWLASIRTNLDDGLLLERG KLYLVRRHEHGLSAVEWEATLNQQLAVVAWLVKHASSVSSIGSAAGRRV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14412; Mature: 14412
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPDSLAALEWVCVLSPRSDRWLLDLAGVPAWGWSYPQGITLAIEIELEVLDDAWLQRV CCCCHHHHHHEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHH CLWLASIRTNLDDGLLLERGKLYLVRRHEHGLSAVEWEATLNQQLAVVAWLVKHASSVSS HHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH IGSAAGRRV HHHHCCCCC >Mature Secondary Structure MKLPDSLAALEWVCVLSPRSDRWLLDLAGVPAWGWSYPQGITLAIEIELEVLDDAWLQRV CCCCHHHHHHEEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHH CLWLASIRTNLDDGLLLERGKLYLVRRHEHGLSAVEWEATLNQQLAVVAWLVKHASSVSS HHHHHHHHCCCCCCEEEECCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHH IGSAAGRRV HHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA