| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is yceJ [C]
Identifier: 34498046
GI number: 34498046
Start: 2791442
End: 2791999
Strand: Reverse
Name: yceJ [C]
Synonym: CV_2591
Alternate gene names: 34498046
Gene position: 2791999-2791442 (Counterclockwise)
Preceding gene: 34498047
Following gene: 34498038
Centisome position: 58.77
GC content: 64.34
Gene sequence:
>558_bases ATGCCGCTTCCCTCCATCCTGCCGATTGGAGTATTCATGAAACGTTATCCCCCTTTGGCGATGGCGCTGCATTGGTTGTG CGCCGCCGTCATGCTGTGGGCGCTACTGAGCGGATTCGCGCTGGCCTCCGGCACTCTGCCGCCGGCCCTGGCCAAAGCCG TGCCGCCGCTGAACGTCGCGCTGACCACCTTGCTGGTCCCGTTCTGGTTGTTGCGCTTGCTCAACCGAATCCGTTTCCGC ATGCCGCCGCCGGCGAGCATGCCGGCGCGCGGATGGAAAATGGCTCGCCGCGGGCACTTGGCGTTGTACGCACTGGGATC CCTGTCCTTGCTCAGCGGCATGTTGATGATGGAGCGCGCGGTGGATGTGTTTGGCTGGTTCACCCTGGCCGCGCCGCTGC CGCCTGGATCGCTGACGCGCGGATTCGCGCGGGTTCATTTCGCCAGCAATGCGGTGTTGGCCCTGGCGGTAATCGCCCAT ATCGCGGCGGTCGTCCTCCATCATCGCCGGGGTCTGCCTATCCTGTGGCGCATGAGGCCAAGTCAAACCGAACTATGA
Upstream 100 bases:
>100_bases ATACCGCTTGGGTTGGCGCGGGTTGGACGCCGTCCACCACGCCGGCGCTGTGGACTCCCGTCTAAATAAAGGCGCGCTTG GAGAGGGTTCGGGAGGCGGC
Downstream 100 bases:
>100_bases TAGCGCATGCTTCATTTTTGTGCGGGGCATGCAGCGACGATGATGGACGTCATTCAGTGCTGGCGATCCGTTAACAAATA ACGGATTTTGTGTGATGCCA
Product: cytochrome b561
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPLPSILPIGVFMKRYPPLAMALHWLCAAVMLWALLSGFALASGTLPPALAKAVPPLNVALTTLLVPFWLLRLLNRIRFR MPPPASMPARGWKMARRGHLALYALGSLSLLSGMLMMERAVDVFGWFTLAAPLPPGSLTRGFARVHFASNAVLALAVIAH IAAVVLHHRRGLPILWRMRPSQTEL
Sequences:
>Translated_185_residues MPLPSILPIGVFMKRYPPLAMALHWLCAAVMLWALLSGFALASGTLPPALAKAVPPLNVALTTLLVPFWLLRLLNRIRFR MPPPASMPARGWKMARRGHLALYALGSLSLLSGMLMMERAVDVFGWFTLAAPLPPGSLTRGFARVHFASNAVLALAVIAH IAAVVLHHRRGLPILWRMRPSQTEL >Mature_184_residues PLPSILPIGVFMKRYPPLAMALHWLCAAVMLWALLSGFALASGTLPPALAKAVPPLNVALTTLLVPFWLLRLLNRIRFRM PPPASMPARGWKMARRGHLALYALGSLSLLSGMLMMERAVDVFGWFTLAAPLPPGSLTRGFARVHFASNAVLALAVIAHI AAVVLHHRRGLPILWRMRPSQTEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20278; Mature: 20147
Theoretical pI: Translated: 12.57; Mature: 12.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPSILPIGVFMKRYPPLAMALHWLCAAVMLWALLSGFALASGTLPPALAKAVPPLNVA CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH LTTLLVPFWLLRLLNRIRFRMPPPASMPARGWKMARRGHLALYALGSLSLLSGMLMMERA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VDVFGWFTLAAPLPPGSLTRGFARVHFASNAVLALAVIAHIAAVVLHHRRGLPILWRMRP HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC SQTEL CCCCC >Mature Secondary Structure PLPSILPIGVFMKRYPPLAMALHWLCAAVMLWALLSGFALASGTLPPALAKAVPPLNVA CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH LTTLLVPFWLLRLLNRIRFRMPPPASMPARGWKMARRGHLALYALGSLSLLSGMLMMERA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VDVFGWFTLAAPLPPGSLTRGFARVHFASNAVLALAVIAHIAAVVLHHRRGLPILWRMRP HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC SQTEL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA