| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34498034
Identifier: 34498034
GI number: 34498034
Start: 2782917
End: 2783774
Strand: Reverse
Name: 34498034
Synonym: CV_2579
Alternate gene names: NA
Gene position: 2783774-2782917 (Counterclockwise)
Preceding gene: 34498035
Following gene: 34498033
Centisome position: 58.59
GC content: 46.85
Gene sequence:
>858_bases ATGAACACGGCTGTAAACCAACCCCCTTCCGGCGTAAACGTACCAACCACTGGCACTGCAGATTCCAGCGACAACAATGA CTACCTGCGCGCGGCGCGGAACTACTCGCTGTTAGGCCAGGCCATCACCACGATGGAAGAGGTCATGCTGCTGTTTACCG AATTGTCCAATGCCAAGTTCGCGCAGATGTCGAAGAAAATGGAAGTGTCTCGCGATGCCCAAGAGAAGGCCAATGTAATG GAGGCCGTGCTGGCAAGTCTGACCGATCCTAATAGTAAAGGTCAGTTGCCGCCAGATGTTATTGAGTATATACGTGAGAA TGGCATCTTAGTAGGAAATCAAACGATTGATGATTTTATTCGTGAAAATGGTCAATTCGTCGGATGCGTGTCAGAGGGGA GGTTTGAGAAAATGGATGAATATATAAAACGATTGGCAAATCTAATCGAATCTTGTGACAGAACAGGAAGTGATCTTCAT CCATTTGAAAGGATGAAAGCTTTTTCTGATTTTATGGATGCTCTAGGCGTTAAAGTGGATGGAAAATCCGTGTCTGATCT TATCAACGAGACTTTGTACATCGATGAAAATGGCTATGAGAGAGTGCCGGTCGCGGTATTGGAGAAAATGCAGAATGCTT TAGAGGAGGCTAAAATGCCAGTTTTCAATATATCAAGTCTGACCGCTGTGAAATCCTCGTTGGAGTCATTCTCCGGACGC GCATCTGACTTCGTGCAGCAGAGCCAGTTGAAGATGCAGCAGCTGATTCAGAACTTCAACACCGCGGTGACCATGGCCAA TAGCTTGCAGAGCATGAACGCGGAATCGACCAAGTCTATCGCCCAAGCTATCCGTTAA
Upstream 100 bases:
>100_bases TCGACCAAGTCCATCGCCCAGGCTATCCGTTAATGGATAAAGGCAGGCGGGTCAGTGCGCGGCGCCTGCCTCCCAATACC ACTCTTGAAAGGAAATATCG
Downstream 100 bases:
>100_bases GCCACGACATGTTGCCGGGTGGTCTTGTCTCCGGCCGGCGCGTGTCAGTACAAGGAGTTTATTTTATGACTGATATCCAT CATCAGCCTGAGCAGACAGA
Product: secreted protein EspA
Products: NA
Alternate protein names: EspA Family Secreted Protein
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MNTAVNQPPSGVNVPTTGTADSSDNNDYLRAARNYSLLGQAITTMEEVMLLFTELSNAKFAQMSKKMEVSRDAQEKANVM EAVLASLTDPNSKGQLPPDVIEYIRENGILVGNQTIDDFIRENGQFVGCVSEGRFEKMDEYIKRLANLIESCDRTGSDLH PFERMKAFSDFMDALGVKVDGKSVSDLINETLYIDENGYERVPVAVLEKMQNALEEAKMPVFNISSLTAVKSSLESFSGR ASDFVQQSQLKMQQLIQNFNTAVTMANSLQSMNAESTKSIAQAIR
Sequences:
>Translated_285_residues MNTAVNQPPSGVNVPTTGTADSSDNNDYLRAARNYSLLGQAITTMEEVMLLFTELSNAKFAQMSKKMEVSRDAQEKANVM EAVLASLTDPNSKGQLPPDVIEYIRENGILVGNQTIDDFIRENGQFVGCVSEGRFEKMDEYIKRLANLIESCDRTGSDLH PFERMKAFSDFMDALGVKVDGKSVSDLINETLYIDENGYERVPVAVLEKMQNALEEAKMPVFNISSLTAVKSSLESFSGR ASDFVQQSQLKMQQLIQNFNTAVTMANSLQSMNAESTKSIAQAIR >Mature_285_residues MNTAVNQPPSGVNVPTTGTADSSDNNDYLRAARNYSLLGQAITTMEEVMLLFTELSNAKFAQMSKKMEVSRDAQEKANVM EAVLASLTDPNSKGQLPPDVIEYIRENGILVGNQTIDDFIRENGQFVGCVSEGRFEKMDEYIKRLANLIESCDRTGSDLH PFERMKAFSDFMDALGVKVDGKSVSDLINETLYIDENGYERVPVAVLEKMQNALEEAKMPVFNISSLTAVKSSLESFSGR ASDFVQQSQLKMQQLIQNFNTAVTMANSLQSMNAESTKSIAQAIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31499; Mature: 31499
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTAVNQPPSGVNVPTTGTADSSDNNDYLRAARNYSLLGQAITTMEEVMLLFTELSNAKF CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AQMSKKMEVSRDAQEKANVMEAVLASLTDPNSKGQLPPDVIEYIRENGILVGNQTIDDFI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEECCCHHHHHH RENGQFVGCVSEGRFEKMDEYIKRLANLIESCDRTGSDLHPFERMKAFSDFMDALGVKVD HCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC GKSVSDLINETLYIDENGYERVPVAVLEKMQNALEEAKMPVFNISSLTAVKSSLESFSGR CHHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCH ASDFVQQSQLKMQQLIQNFNTAVTMANSLQSMNAESTKSIAQAIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC >Mature Secondary Structure MNTAVNQPPSGVNVPTTGTADSSDNNDYLRAARNYSLLGQAITTMEEVMLLFTELSNAKF CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH AQMSKKMEVSRDAQEKANVMEAVLASLTDPNSKGQLPPDVIEYIRENGILVGNQTIDDFI HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEECCCHHHHHH RENGQFVGCVSEGRFEKMDEYIKRLANLIESCDRTGSDLHPFERMKAFSDFMDALGVKVD HCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCC GKSVSDLINETLYIDENGYERVPVAVLEKMQNALEEAKMPVFNISSLTAVKSSLESFSGR CHHHHHHHHHCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCH ASDFVQQSQLKMQQLIQNFNTAVTMANSLQSMNAESTKSIAQAIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA