| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is cheY1 [H]
Identifier: 34497967
GI number: 34497967
Start: 2704970
End: 2705338
Strand: Reverse
Name: cheY1 [H]
Synonym: CV_2512
Alternate gene names: 34497967
Gene position: 2705338-2704970 (Counterclockwise)
Preceding gene: 34497968
Following gene: 34497966
Centisome position: 56.94
GC content: 62.6
Gene sequence:
>369_bases ATGGGTAAATCCATCCTGATCGTCGATGACGCCGCCAGCATCCGCGCGACCGTCAGCATCGCGCTGAAGGGCGCCGGCTA CGATGTGATCGAAGCCTGCGACGGCAACGACGCGCTGTCCAAGCTGAACGGCGTCCGCGTCAACCTCGTCATTTCCGACG TCAACATGCCGGGCATGGACGGCATCACGCTGCTGAAACGCTTGAAAGAGGGCGCCGCCACGCGTTTCCTGCCGGTGATC ATGCTGACCACCGAGGGCAGCGACGACAAGAAGATGCAGGGCAAGGAGGCTGGCGCCAAGGCATGGATCGTCAAGCCTTT CGATCCGGCCAAGCTGCTGGACGCGGTGTCCAAGCTGATCCAGCCCTGA
Upstream 100 bases:
>100_bases GGCCCTGCATCAGGGCGGCGGCGGCAAGCCTGCGGCTTCCAGCGGCGATGTCGACTTTTTCTGATGCCGCGGCATCGGAT CACCCCACCTGGAGGAGTTC
Downstream 100 bases:
>100_bases GCCGGAGCGCGAGATGGGGCTGCAACTGCGACAGGATGGCGAAACGACGCTGGCGGCGCTGGATGGCGAGCTGACGATTT TCACCGCCGAGGACATGCAG
Product: chemotaxis protein CheY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MGKSILIVDDAASIRATVSIALKGAGYDVIEACDGNDALSKLNGVRVNLVISDVNMPGMDGITLLKRLKEGAATRFLPVI MLTTEGSDDKKMQGKEAGAKAWIVKPFDPAKLLDAVSKLIQP
Sequences:
>Translated_122_residues MGKSILIVDDAASIRATVSIALKGAGYDVIEACDGNDALSKLNGVRVNLVISDVNMPGMDGITLLKRLKEGAATRFLPVI MLTTEGSDDKKMQGKEAGAKAWIVKPFDPAKLLDAVSKLIQP >Mature_121_residues GKSILIVDDAASIRATVSIALKGAGYDVIEACDGNDALSKLNGVRVNLVISDVNMPGMDGITLLKRLKEGAATRFLPVIM LTTEGSDDKKMQGKEAGAKAWIVKPFDPAKLLDAVSKLIQP
Specific function: This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by phoB and phoR when phosphate is limited [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786599, Length=125, Percent_Identity=38.4, Blast_Score=94, Evalue=3e-21, Organism=Escherichia coli, GI1788191, Length=118, Percent_Identity=41.5254237288136, Blast_Score=88, Evalue=2e-19, Organism=Escherichia coli, GI1790863, Length=109, Percent_Identity=38.5321100917431, Blast_Score=77, Evalue=2e-16, Organism=Escherichia coli, GI1788713, Length=118, Percent_Identity=37.2881355932203, Blast_Score=71, Evalue=2e-14, Organism=Escherichia coli, GI1790299, Length=116, Percent_Identity=34.4827586206897, Blast_Score=70, Evalue=5e-14, Organism=Escherichia coli, GI1789809, Length=117, Percent_Identity=29.9145299145299, Blast_Score=67, Evalue=4e-13, Organism=Escherichia coli, GI145693157, Length=102, Percent_Identity=38.2352941176471, Blast_Score=65, Evalue=9e-13, Organism=Escherichia coli, GI87082012, Length=109, Percent_Identity=35.7798165137615, Blast_Score=65, Evalue=1e-12, Organism=Escherichia coli, GI1788550, Length=117, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=6e-12, Organism=Escherichia coli, GI1787375, Length=117, Percent_Identity=28.2051282051282, Blast_Score=60, Evalue=3e-11, Organism=Escherichia coli, GI1790437, Length=104, Percent_Identity=35.5769230769231, Blast_Score=60, Evalue=4e-11, Organism=Escherichia coli, GI1788905, Length=117, Percent_Identity=31.6239316239316, Blast_Score=59, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR011879 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 12896; Mature: 12765
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKSILIVDDAASIRATVSIALKGAGYDVIEACDGNDALSKLNGVRVNLVISDVNMPGMD CCCEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCHHHHHCCCEEEEEEEEECCCCCCC GITLLKRLKEGAATRFLPVIMLTTEGSDDKKMQGKEAGAKAWIVKPFDPAKLLDAVSKLI HHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH QP CC >Mature Secondary Structure GKSILIVDDAASIRATVSIALKGAGYDVIEACDGNDALSKLNGVRVNLVISDVNMPGMD CCEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCHHHHHCCCEEEEEEEEECCCCCCC GITLLKRLKEGAATRFLPVIMLTTEGSDDKKMQGKEAGAKAWIVKPFDPAKLLDAVSKLI HHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH QP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2115874; 10984043 [H]