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The map label for this gene is ybhR [H]

Identifier: 34497912

GI number: 34497912

Start: 2642963

End: 2644054

Strand: Reverse

Name: ybhR [H]

Synonym: CV_2457

Alternate gene names: 34497912

Gene position: 2644054-2642963 (Counterclockwise)

Preceding gene: 34497913

Following gene: 34497910

Centisome position: 55.65

GC content: 65.93

Gene sequence:

>1092_bases
ATGTGGCAACGACTGCTGTGGCTGATCATCAAGGAACTGCAGGCGCTGGCCGGCAACCGCCAGGGGCGCTTGCTGCTGGT
GGTGCCAGTGCTGCTGCAATTGCTGGTTTTCCCCTTCGCCGCCACGCTGGAGGTCAAGCATGCCAGCCTGGCGGTGTACA
ACCAGGATGCCGGCGCGGCCTCGCAGGAGCTGGTGAAGCGCATGGCCGCCAGCGCCACTTTCGACCATATGCTGCCGATG
CGCAGCTATCCGGAGCTGCGGGACTGCATCGACCGCCAATGCGCGCTGCTGGCCGTGGTGTTTCCCCAGGACTTTTCGCG
GGCTCTGGCCGCCGGCCGGCCGACATCGCTGCAAGTGATCGTGGATGGGCGCCGCTCCAATAGCGGACAGATCGCCAGCG
CCTACATCGGCCAGATGGTCGCCGCCTACCGGCAGGAGCGCGCCGATCCGGGGCCGCAGCTTTCCGTTCGCAACCTGTAC
AACCCCAACCTGGAGTTCCAGTGGCATGTGCTGCCCAGCCTGGTGGCCATCATCACCACCATAGGCTGCCTGATCGTCAC
CGCCCTGTCGGTGGCGCGGGAGCGCGAGGAGGGCACCTTCGAGCAGTTGCTGGTGTCGCCGCTGACGCCGGCCTACGTGA
TGGCGGGCAAGGCGGTGCCGGGCGTGCTGGTGGCCTTGCTGCAGGGCGGATTGATCGCCGTCGCCGCGGCATGGGCTTAC
CGGGTGCCCTTTGACGGCTCCGTCGCTCTGCTGCTGATCAGCATGGCCAGCTATGGCCTGGCGCTGGCCGGGGTGGGCCT
GTTCATCTCATCGATCTGCCGCACCCAGCAGCAGGCGTTTCTGGGGGTGTTTTCCTTCATGGTGCCGGCGGTGATCCTGT
CCGGCTACGTGTCGCCTATCGAGAACATGCCGGACGCGCTGCAATGGCTGGCGCGGATCAATCCGCTCAGCTACTTCATT
CCCATCCTGAAAGGGGCTTTCCTGAAGGGCTACGGTTTCGTCGACGCCTGGCCGTGGCTGCTGCCGCTGTGGCTGATCGC
CGCCATCACGCTGAGCCTGGCGCTATGGCGCTTCCGCCGCCATGTCGAATAG

Upstream 100 bases:

>100_bases
CCATCGCTGTTGTGGTTCAACGCCGCCAGCCTGATCCTGCTGGGCGCGTTCTGGCTGGGGCAGACCGTGCGCAAGACGCG
GCGCACGCTGGATTGAAGCG

Downstream 100 bases:

>100_bases
CGGTCGTCAACGCATGATGCTGGCCGCGTGCGGCAAGCCTTGCAGCGCACCGCGCAGAATGCGCTCGCAGCGCGGCAGCG
CGTCCGGGCTGGCCTCCAGC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MWQRLLWLIIKELQALAGNRQGRLLLVVPVLLQLLVFPFAATLEVKHASLAVYNQDAGAASQELVKRMAASATFDHMLPM
RSYPELRDCIDRQCALLAVVFPQDFSRALAAGRPTSLQVIVDGRRSNSGQIASAYIGQMVAAYRQERADPGPQLSVRNLY
NPNLEFQWHVLPSLVAIITTIGCLIVTALSVAREREEGTFEQLLVSPLTPAYVMAGKAVPGVLVALLQGGLIAVAAAWAY
RVPFDGSVALLLISMASYGLALAGVGLFISSICRTQQQAFLGVFSFMVPAVILSGYVSPIENMPDALQWLARINPLSYFI
PILKGAFLKGYGFVDAWPWLLPLWLIAAITLSLALWRFRRHVE

Sequences:

>Translated_363_residues
MWQRLLWLIIKELQALAGNRQGRLLLVVPVLLQLLVFPFAATLEVKHASLAVYNQDAGAASQELVKRMAASATFDHMLPM
RSYPELRDCIDRQCALLAVVFPQDFSRALAAGRPTSLQVIVDGRRSNSGQIASAYIGQMVAAYRQERADPGPQLSVRNLY
NPNLEFQWHVLPSLVAIITTIGCLIVTALSVAREREEGTFEQLLVSPLTPAYVMAGKAVPGVLVALLQGGLIAVAAAWAY
RVPFDGSVALLLISMASYGLALAGVGLFISSICRTQQQAFLGVFSFMVPAVILSGYVSPIENMPDALQWLARINPLSYFI
PILKGAFLKGYGFVDAWPWLLPLWLIAAITLSLALWRFRRHVE
>Mature_363_residues
MWQRLLWLIIKELQALAGNRQGRLLLVVPVLLQLLVFPFAATLEVKHASLAVYNQDAGAASQELVKRMAASATFDHMLPM
RSYPELRDCIDRQCALLAVVFPQDFSRALAAGRPTSLQVIVDGRRSNSGQIASAYIGQMVAAYRQERADPGPQLSVRNLY
NPNLEFQWHVLPSLVAIITTIGCLIVTALSVAREREEGTFEQLLVSPLTPAYVMAGKAVPGVLVALLQGGLIAVAAAWAY
RVPFDGSVALLLISMASYGLALAGVGLFISSICRTQQQAFLGVFSFMVPAVILSGYVSPIENMPDALQWLARINPLSYFI
PILKGAFLKGYGFVDAWPWLLPLWLIAAITLSLALWRFRRHVE

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=367, Percent_Identity=52.8610354223433, Blast_Score=370, Evalue=1e-104,
Organism=Escherichia coli, GI226510979, Length=382, Percent_Identity=29.5811518324607, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI48994943, Length=338, Percent_Identity=24.8520710059172, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1787011, Length=338, Percent_Identity=27.2189349112426, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 39846; Mature: 39846

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWQRLLWLIIKELQALAGNRQGRLLLVVPVLLQLLVFPFAATLEVKHASLAVYNQDAGAA
CHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHEEEHHEEEEEECCCCHH
SQELVKRMAASATFDHMLPMRSYPELRDCIDRQCALLAVVFPQDFSRALAAGRPTSLQVI
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHCCCCCEEEEE
VDGRRSNSGQIASAYIGQMVAAYRQERADPGPQLSVRNLYNPNLEFQWHVLPSLVAIITT
EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCEEEHHHHHHHHHHHH
IGCLIVTALSVAREREEGTFEQLLVSPLTPAYVMAGKAVPGVLVALLQGGLIAVAAAWAY
HHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH
RVPFDGSVALLLISMASYGLALAGVGLFISSICRTQQQAFLGVFSFMVPAVILSGYVSPI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENMPDALQWLARINPLSYFIPILKGAFLKGYGFVDAWPWLLPLWLIAAITLSLALWRFRR
HCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HVE
HCC
>Mature Secondary Structure
MWQRLLWLIIKELQALAGNRQGRLLLVVPVLLQLLVFPFAATLEVKHASLAVYNQDAGAA
CHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHEEEHHEEEEEECCCCHH
SQELVKRMAASATFDHMLPMRSYPELRDCIDRQCALLAVVFPQDFSRALAAGRPTSLQVI
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHCCCCCEEEEE
VDGRRSNSGQIASAYIGQMVAAYRQERADPGPQLSVRNLYNPNLEFQWHVLPSLVAIITT
EECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCEEEHHHHHHHHHHHH
IGCLIVTALSVAREREEGTFEQLLVSPLTPAYVMAGKAVPGVLVALLQGGLIAVAAAWAY
HHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHH
RVPFDGSVALLLISMASYGLALAGVGLFISSICRTQQQAFLGVFSFMVPAVILSGYVSPI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENMPDALQWLARINPLSYFIPILKGAFLKGYGFVDAWPWLLPLWLIAAITLSLALWRFRR
HCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HVE
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]